Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316066

Identifier: 74316066

GI number: 74316066

Start: 49133

End: 50467

Strand: Reverse

Name: 74316066

Synonym: Tbd_0048

Alternate gene names: NA

Gene position: 50467-49133 (Counterclockwise)

Preceding gene: 74316067

Following gene: 74316065

Centisome position: 1.73

GC content: 71.16

Gene sequence:

>1335_bases
ATGAAACCGAAAATCATCGTGCTCGACGACGACCCGACCGGCTCGCAGACCGTGCATTCGTGTCTGCTGCTGACGCGCTG
GGACGTCGCCACGCTGAAGACGGCGCTGGCCGACGCGGCGCCCTTGTTCTTCGTCCTGACCAACACCCGCGGCATGGACG
CGGCGCGCGCCGCAGCGGTGACGCGCGAGGTGTGCGTCAACCTGAAGGCGGCGCTGGTCGACTACACGGGCCCGGTCCTC
TTCGTGTCGCGCTCGGATTCGACGCTGCGCGGACACTACCCGGTCGAGACCGACGTCATGAACGAATTGCTCGGACCGTT
CGACGCGACGCTGCTCACGCCCGGGTTCTTCGAGGGCGGGCGCATCACACGTGACAGCACGCATTACCTGGTCGTCGACG
GCCAGCCAGTGCCGACGCACGAAACCGAATTCGCGCGCGATTCGGTGTTCGGCTACACGACGGCCTTCCTCCCTGACTAC
GTGAGCGAGAAGACCGGCGGCCGGGTCGCGGCAGAGTCCGTCGCCCGCCTGACGTTCAAGGATCTGCGCGCAGGCCGCGC
AGGCGCGTGGCTCGCCGGCCTCGAAGGCAACGTGGTCGGCGCGGTCGACGGCGAAACGCCGGAGGACTATGCGCTCTTCG
CCGACGCCGCGCTCAAGGCCGCCGCGCACGGCAAGCGCCTGTTGTTTCGCAGCGCCGCGTCCCTGCTCACCGCGCTGGCG
AAACTGCCGCCGCAGCCGGTCGCCGCCGAATCCTTCGCGAGCCTCGTTCGCGACGGCCGCGCGGGCGCGGTAATCGTCGG
CTCCCACGTCGCGAGGGCGACGGCGCAGCTCGGCGCCCTGCTGCGCGAGCGCGGCGTCGTCGGCCTGCCGCTCGACGTCG
CGCGGCTGCCCGAAGACCACGACGCGCTCGTCGATGCGCTGCGTGCCGGCGTCGCCCACGCGCACGCACATGGCCTCACG
CCGGTCGTCTACACGAGCCGGGGGGAACGCCAGTTCGCGAGCACCGCCGAGCGGCTCGCCTTCGGCGCCGCGGTCTCGGC
CGCCCTGATGGCTGTCGTGCGCCAACTTCCGGCGACGCTGGGCTTTCTCGTCAGCAAGGGCGGCATCACCTCGAACGACG
TGCTCTCGACCGGCCTCGAACTCGCCGCGGCACGCGTGCTCGGGCAGATCCTGCCCGGCGTCACGGTGGTGCAGACGCCG
CCGTGGCATGCGGTCCCGCAACTTCCCGTCGTCATCTTTCCGGGCAACGTCGGCGGCGACGACGCCCTGGCGGAGGTCTA
CCGCCGCCTCGCCCCCTCGCGCGCGCAGGCGGGCCGGGCTAAACTCGCTGCCTGA

Upstream 100 bases:

>100_bases
TGTTCGACTTCAACGGCATGAACGCGCAGGCGATGGGCGAGCGCGCGATGGCCCTGCTCGAGCGCGCCGCGGGCTGATGC
CGGTGTCGGGAGGTCCGTCC

Downstream 100 bases:

>100_bases
CTTTATGCTCAGTCCCAGCTTCCTCGCGCATCTGCGCACTCTCCTGCCGGCGCACTGCGTGCTCAACGAGCGCGAAGACC
TGCGGCCCTTCGAGTCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAVTREVCVNLKAALVDYTGPVL
FVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGGRITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDY
VSEKTGGRVAAESVARLTFKDLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA
KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDHDALVDALRAGVAHAHAHGLT
PVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATLGFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTP
PWHAVPQLPVVIFPGNVGGDDALAEVYRRLAPSRAQAGRAKLAA

Sequences:

>Translated_444_residues
MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAVTREVCVNLKAALVDYTGPVL
FVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGGRITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDY
VSEKTGGRVAAESVARLTFKDLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA
KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDHDALVDALRAGVAHAHAHGLT
PVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATLGFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTP
PWHAVPQLPVVIFPGNVGGDDALAEVYRRLAPSRAQAGRAKLAA
>Mature_444_residues
MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAVTREVCVNLKAALVDYTGPVL
FVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGGRITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDY
VSEKTGGRVAAESVARLTFKDLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA
KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDHDALVDALRAGVAHAHAHGLT
PVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATLGFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTP
PWHAVPQLPVVIFPGNVGGDDALAEVYRRLAPSRAQAGRAKLAA

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46583; Mature: 46583

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAV
CCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
TREVCVNLKAALVDYTGPVLFVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGG
HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCHHHCCCCCCCCC
RITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDYVSEKTGGRVAAESVARLTFK
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA
HHHCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDH
HCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
DALVDALRAGVAHAHAHGLTPVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATL
HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTPPWHAVPQLPVVIFPGNVGGD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCH
DALAEVYRRLAPSRAQAGRAKLAA
HHHHHHHHHHCCCHHHCCCHHCCC
>Mature Secondary Structure
MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAV
CCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
TREVCVNLKAALVDYTGPVLFVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGG
HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCHHHCCCCCCCCC
RITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDYVSEKTGGRVAAESVARLTFK
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA
HHHCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDH
HCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
DALVDALRAGVAHAHAHGLTPVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATL
HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTPPWHAVPQLPVVIFPGNVGGD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCH
DALAEVYRRLAPSRAQAGRAKLAA
HHHHHHHHHHCCCHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA