| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is blh [H]
Identifier: 74316061
GI number: 74316061
Start: 44243
End: 44992
Strand: Reverse
Name: blh [H]
Synonym: Tbd_0043
Alternate gene names: 74316061
Gene position: 44992-44243 (Counterclockwise)
Preceding gene: 74316062
Following gene: 74316053
Centisome position: 1.55
GC content: 66.67
Gene sequence:
>750_bases ATGATTTTCAAGCAACTGTTCGAGCCGGTCTCGAGCACCTACACCTATCTGCTCGGCTGCGAGGAAACGGGGGCGGCGCT CCTGATCGACCCGGTGCTGCCGACCTGGGAGCGCGACCTCGCCGAGGTTAACAAACTCGGGCTCAGGCTCGCGTACACGC TCGAGACGCACATCCACGCCGATCACATCACCTCGGCGCAGAAACTCAAGACCGAGGCCGGCAGCAAGATCGCCGGCCCC GCGCTCGACGCGCTGCCGTGCACCGAGGTCGGCATCGTCGACGGCGTGCCGTTCACGATGGGCTCGGTCGAGCTCGCGCC GATCCACACGCCGGGTCACACCGACAACCATTTCGCGTATTTTCACGACGGCCGGCTCTACACCGGCGACGCGCTGCTGA TCGAGGCGTGCGGGCGTACCGACTTCCAGAGCGGCGACCCGGCCGCGCTGTATCACTCGGTACGCGGCAAGCTCTTCGCC TACGACGACGATACGCTCGTCTATCCGGCGCACGACTACGAGCAGCGGCGCATCAGCACCGTCGGCCAGGAGAAGGCGCG CAACCCGCGCCTCGGCGGCGAGCGCACGCTCGAGGATTTCGTCGCGCTGATGAACGCGCTCGACCTGCCCTATCCCAAGT TCATCGACCACGCGCTGCCCGGCAATCGTGCATGCGGCGTCTGTCCGCCCGACGTGCCCGAGCATCTGCAGGCCTATTGC GTGCAGATCGCCGACAGCCGCCAGGGCTGA
Upstream 100 bases:
>100_bases CGCATCTGCAATCCGGTACCGCGACGCCGGTCAGGCACTGGGTGGAACTTTTGGACGAGGCGCTGGCCGCATCCTGAAGC GCTTCGAGGAGGACTCCAGA
Downstream 100 bases:
>100_bases GGACTCAGGGCGCGAGGTCGCCCGGTTCGTTGAGGTTGGCGAAGGCGGCGGCGTCGAAGCGCACACGCGTCGACGCGAGC CCGGCCTGCCAATGACGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIFKQLFEPVSSTYTYLLGCEETGAALLIDPVLPTWERDLAEVNKLGLRLAYTLETHIHADHITSAQKLKTEAGSKIAGP ALDALPCTEVGIVDGVPFTMGSVELAPIHTPGHTDNHFAYFHDGRLYTGDALLIEACGRTDFQSGDPAALYHSVRGKLFA YDDDTLVYPAHDYEQRRISTVGQEKARNPRLGGERTLEDFVALMNALDLPYPKFIDHALPGNRACGVCPPDVPEHLQAYC VQIADSRQG
Sequences:
>Translated_249_residues MIFKQLFEPVSSTYTYLLGCEETGAALLIDPVLPTWERDLAEVNKLGLRLAYTLETHIHADHITSAQKLKTEAGSKIAGP ALDALPCTEVGIVDGVPFTMGSVELAPIHTPGHTDNHFAYFHDGRLYTGDALLIEACGRTDFQSGDPAALYHSVRGKLFA YDDDTLVYPAHDYEQRRISTVGQEKARNPRLGGERTLEDFVALMNALDLPYPKFIDHALPGNRACGVCPPDVPEHLQAYC VQIADSRQG >Mature_249_residues MIFKQLFEPVSSTYTYLLGCEETGAALLIDPVLPTWERDLAEVNKLGLRLAYTLETHIHADHITSAQKLKTEAGSKIAGP ALDALPCTEVGIVDGVPFTMGSVELAPIHTPGHTDNHFAYFHDGRLYTGDALLIEACGRTDFQSGDPAALYHSVRGKLFA YDDDTLVYPAHDYEQRRISTVGQEKARNPRLGGERTLEDFVALMNALDLPYPKFIDHALPGNRACGVCPPDVPEHLQAYC VQIADSRQG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=238, Percent_Identity=44.1176470588235, Blast_Score=185, Evalue=4e-47, Organism=Homo sapiens, GI21703352, Length=197, Percent_Identity=27.9187817258883, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI116642887, Length=197, Percent_Identity=27.9187817258883, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI94538322, Length=177, Percent_Identity=30.5084745762712, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI94538320, Length=177, Percent_Identity=30.5084745762712, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1787158, Length=205, Percent_Identity=33.1707317073171, Blast_Score=89, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538952, Length=233, Percent_Identity=44.206008583691, Blast_Score=184, Evalue=5e-47, Organism=Drosophila melanogaster, GI221330176, Length=237, Percent_Identity=43.0379746835443, Blast_Score=180, Evalue=9e-46, Organism=Drosophila melanogaster, GI24667703, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24667711, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI21356335, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 27336; Mature: 27336
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKQLFEPVSSTYTYLLGCEETGAALLIDPVLPTWERDLAEVNKLGLRLAYTLETHIHA CCHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCEEEEEEEEHHHHH DHITSAQKLKTEAGSKIAGPALDALPCTEVGIVDGVPFTMGSVELAPIHTPGHTDNHFAY HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEE FHDGRLYTGDALLIEACGRTDFQSGDPAALYHSVRGKLFAYDDDTLVYPAHDYEQRRIST EECCEEEECCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCEEEECCCCHHHHHHHH VGQEKARNPRLGGERTLEDFVALMNALDLPYPKFIDHALPGNRACGVCPPDVPEHLQAYC HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHH VQIADSRQG HHHHCCCCC >Mature Secondary Structure MIFKQLFEPVSSTYTYLLGCEETGAALLIDPVLPTWERDLAEVNKLGLRLAYTLETHIHA CCHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCEEEEEEEEHHHHH DHITSAQKLKTEAGSKIAGPALDALPCTEVGIVDGVPFTMGSVELAPIHTPGHTDNHFAY HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEE FHDGRLYTGDALLIEACGRTDFQSGDPAALYHSVRGKLFAYDDDTLVYPAHDYEQRRIST EECCEEEECCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCEEEECCCCHHHHHHHH VGQEKARNPRLGGERTLEDFVALMNALDLPYPKFIDHALPGNRACGVCPPDVPEHLQAYC HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHH VQIADSRQG HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]