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The map label for this gene is yiaO [C]

Identifier: 73539626

GI number: 73539626

Start: 2629388

End: 2630557

Strand: Direct

Name: yiaO [C]

Synonym: Reut_B5806

Alternate gene names: 73539626

Gene position: 2629388-2630557 (Clockwise)

Preceding gene: 73539625

Following gene: 73539632

Centisome position: 96.45

GC content: 55.9

Gene sequence:

>1170_bases
ATGTCACGCTTCTTACTGCTTTGCAAGAAATCAGGATGGCGCATCGTCGTGCATCACAAGGAGACAGGAATGCCCAAGCA
TTCATCCGTAGTGGGTCTGCTTACCTTATTGGTGTCATCAAGGTATAGGCGGAGTCTTGCCAGACTCGCTTGTTACATCC
CATTGTCCGTACTGGCAACCGCAGCGGTGGCGGACCCTCTCTCCGCCGCGATGCCGGGGGTGAGAATCATCCATATCGCC
GATTACCGTGGATATCTCTCGGTGGATCACCCCGTGCGCCGTGGCATGAACAAGTTTTCAGAACTGGTGGCAGCCCGAAG
TGGTGGCCGCATACTCGTGCAGGCCTCCGCAGATTCCATGCCGGAATCTCCATCAGTCCAGATCGCATCCTTGCAGGCAG
GAGATGGCAGAACGCCAGAATTGATGCTTCAAGCTACGATCGGGCTGGCTGATGTCGAGAAGGGCTTTGGTCTGATTGAT
CTTCCGTTCACGATCAGCAATGAAAATCAGGCCAATGCATTGCTCGACGGACCTTTCGGCGCCACCCTGTTGGATCGTCT
GGCAAGCCGTAATCTGATCGGACTCGCATGGTGGGAGAACGGCTTCCGGCATGTGACGACTTCTACTGGTCCCATCCTCC
ATGCGGACAACTTCATTGGCTTGAAGATTCGTGTCATCCCTTCGCCTTTGTTCATGGAAAGCTTCAAGGAAATTGGGGCG
GATCCCGTCCCTTTGCCATTTTCTGAACTGCATGCCGCGTTGAAATCCAGGAGCGTCGCAGCGCAGGACAATTTCTATTC
CCAGATAGTGACGGGCAAACTGTATGAGGTCCAGACCTACCTGAGTGTCACCCACCACTCGTACGGTGCCATGACATTGA
TCGCGAGCAAGCGCTTCTGGGACACGTTGGCGCCGGCTGACCAGGCACTGTTGCGCGACGCCGCGGCGGAGGCCGGCCAG
TATCAGCGGCGCCTGATTCGCGCTGAGAATGCCAGGATGCGTGCGGAGCTTGAAGCCAAAGGCATGCGTATCAATGAGAT
GGAGCCCGCCGAACTCAGGAAGTTAGGCGAGCGAGCCCGACCGGTGCTTGCGCGCATTGCCCGCGACTATGACGCTTCCG
TTATTGACTTGTATAAGGCCGAACTCGACAAGATTCGTATGCTTCATTGA

Upstream 100 bases:

>100_bases
GCAGTTCTACGACTCGCTGCAATGGCTGCATGGGTGGCGGGCTGAGAAATGCCTGAGCCAGACGCCCTGGCTGTGAGAAG
CAAGGCGGGGAAAGAAGCGG

Downstream 100 bases:

>100_bases
GCGAGCCCGACTTGGGCGGCCGGTCATCCGGCGCATCATTGTCGCGCCGTCAGACTCAGGTGCGAATCCAGCCGCGGCCC
CAGGAATTGAGCGTGTATTC

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSRFLLLCKKSGWRIVVHHKETGMPKHSSVVGLLTLLVSSRYRRSLARLACYIPLSVLATAAVADPLSAAMPGVRIIHIA
DYRGYLSVDHPVRRGMNKFSELVAARSGGRILVQASADSMPESPSVQIASLQAGDGRTPELMLQATIGLADVEKGFGLID
LPFTISNENQANALLDGPFGATLLDRLASRNLIGLAWWENGFRHVTTSTGPILHADNFIGLKIRVIPSPLFMESFKEIGA
DPVPLPFSELHAALKSRSVAAQDNFYSQIVTGKLYEVQTYLSVTHHSYGAMTLIASKRFWDTLAPADQALLRDAAAEAGQ
YQRRLIRAENARMRAELEAKGMRINEMEPAELRKLGERARPVLARIARDYDASVIDLYKAELDKIRMLH

Sequences:

>Translated_389_residues
MSRFLLLCKKSGWRIVVHHKETGMPKHSSVVGLLTLLVSSRYRRSLARLACYIPLSVLATAAVADPLSAAMPGVRIIHIA
DYRGYLSVDHPVRRGMNKFSELVAARSGGRILVQASADSMPESPSVQIASLQAGDGRTPELMLQATIGLADVEKGFGLID
LPFTISNENQANALLDGPFGATLLDRLASRNLIGLAWWENGFRHVTTSTGPILHADNFIGLKIRVIPSPLFMESFKEIGA
DPVPLPFSELHAALKSRSVAAQDNFYSQIVTGKLYEVQTYLSVTHHSYGAMTLIASKRFWDTLAPADQALLRDAAAEAGQ
YQRRLIRAENARMRAELEAKGMRINEMEPAELRKLGERARPVLARIARDYDASVIDLYKAELDKIRMLH
>Mature_388_residues
SRFLLLCKKSGWRIVVHHKETGMPKHSSVVGLLTLLVSSRYRRSLARLACYIPLSVLATAAVADPLSAAMPGVRIIHIAD
YRGYLSVDHPVRRGMNKFSELVAARSGGRILVQASADSMPESPSVQIASLQAGDGRTPELMLQATIGLADVEKGFGLIDL
PFTISNENQANALLDGPFGATLLDRLASRNLIGLAWWENGFRHVTTSTGPILHADNFIGLKIRVIPSPLFMESFKEIGAD
PVPLPFSELHAALKSRSVAAQDNFYSQIVTGKLYEVQTYLSVTHHSYGAMTLIASKRFWDTLAPADQALLRDAAAEAGQY
QRRLIRAENARMRAELEAKGMRINEMEPAELRKLGERARPVLARIARDYDASVIDLYKAELDKIRMLH

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=247, Percent_Identity=31.9838056680162, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 42909; Mature: 42778

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFLLLCKKSGWRIVVHHKETGMPKHSSVVGLLTLLVSSRYRRSLARLACYIPLSVLAT
CCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVADPLSAAMPGVRIIHIADYRGYLSVDHPVRRGMNKFSELVAARSGGRILVQASADSM
HHHHCCHHHHCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
PESPSVQIASLQAGDGRTPELMLQATIGLADVEKGFGLIDLPFTISNENQANALLDGPFG
CCCCCEEEEEEECCCCCCHHEEEEECCCHHHHHCCCCEEEEEEEECCCCCCCEEECCCCC
ATLLDRLASRNLIGLAWWENGFRHVTTSTGPILHADNFIGLKIRVIPSPLFMESFKEIGA
HHHHHHHHCCCEEEEEEECCCCEEEECCCCCEEECCCEEEEEEEEECCHHHHHHHHHCCC
DPVPLPFSELHAALKSRSVAAQDNFYSQIVTGKLYEVQTYLSVTHHSYGAMTLIASKRFW
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHH
DTLAPADQALLRDAAAEAGQYQRRLIRAENARMRAELEAKGMRINEMEPAELRKLGERAR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHCCCCCCCCCHHHHHHHHHHHH
PVLARIARDYDASVIDLYKAELDKIRMLH
HHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRFLLLCKKSGWRIVVHHKETGMPKHSSVVGLLTLLVSSRYRRSLARLACYIPLSVLAT
CCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVADPLSAAMPGVRIIHIADYRGYLSVDHPVRRGMNKFSELVAARSGGRILVQASADSM
HHHHCCHHHHCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
PESPSVQIASLQAGDGRTPELMLQATIGLADVEKGFGLIDLPFTISNENQANALLDGPFG
CCCCCEEEEEEECCCCCCHHEEEEECCCHHHHHCCCCEEEEEEEECCCCCCCEEECCCCC
ATLLDRLASRNLIGLAWWENGFRHVTTSTGPILHADNFIGLKIRVIPSPLFMESFKEIGA
HHHHHHHHCCCEEEEEEECCCCEEEECCCCCEEECCCEEEEEEEEECCHHHHHHHHHCCC
DPVPLPFSELHAALKSRSVAAQDNFYSQIVTGKLYEVQTYLSVTHHSYGAMTLIASKRFW
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHH
DTLAPADQALLRDAAAEAGQYQRRLIRAENARMRAELEAKGMRINEMEPAELRKLGERAR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHCCCCCCCCCHHHHHHHHHHHH
PVLARIARDYDASVIDLYKAELDKIRMLH
HHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]