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The map label for this gene is ttdA [H]

Identifier: 73539473

GI number: 73539473

Start: 2475783

End: 2476682

Strand: Reverse

Name: ttdA [H]

Synonym: Reut_B5651

Alternate gene names: 73539473

Gene position: 2476682-2475783 (Counterclockwise)

Preceding gene: 73539474

Following gene: 73539472

Centisome position: 90.85

GC content: 63.22

Gene sequence:

>900_bases
ATGGACACGGAAGCTGCAGTCCAGTCGTTGACAGACACCATGGCGAAGTTCACGGCTTACATCGGCAAGCGTCTGCCCAC
CGATGTCAAGAAGAAGCTCGCCGAACTGCGCACGATGGAAACCAATCCGCTGGCGAAGTCGATCTACGATTCGATGGCCG
GCAACCAGGAAGCTGCGGACAAACTTGATCGGCCGAGCTGCCAGGACACCGGTGTCATCCAGTATTTCGTCGAGGCCGGC
GCCAATTTCCCGCTGCTGGGCGAACTCGAAGAGATCCTGAAGGAGGCCACCGCCGAGGCCACCCGCATGGGGCCGCTGCG
CCATAACGCCGTCGAGACCTTCGATGAGAAGAACACCGGCACCAATACCGGCACCCAGATCCCGTGGCTGGACTGGCGCA
TCGTCCCAGGCCTGGATAGCTGCACCATCGACGTCTACATGGCCGGCGGCGGCTGCACGCTGCCCGGCGCGGCCAAGGTC
CTGATGCCGGGCCAGGGTTACGAGGGCGTGGCGGAATTCGTGATGGACGTCATCACCGAACGCGGCGTCAATGCGTGCCC
GCCGCTGCTCGTCGGCGTCGGTGTGTCGACATCGGTCGAGACTGCCGCGCGGCTGTCCAAGCTCGCGATCATGCGGCCGG
TCGATTCCAGGAGCGCAAATCCGCGTGCGGCGCTGATGGAAGACCTGCTGGAGCAAGGCCTCAACGAGGTCGGAATCGGG
CCGCAGGGCCTGACAGGGAATAACAGCGTCATGGGCGTCAACATCGAATCGTCGGCGCGTCATCCATCGACGATCGGCGT
GGCGGTCAACACGGGCTGCTGGGCGCATCGCCGCGGCAAGATCCGCATCAACGCCGACATGTCTTACGAAATCATTTCCC
ACGAAGGAGTCGTCCTGTGA

Upstream 100 bases:

>100_bases
TGGCCACCTCGCAGAAGTCGAAGGTGACCGCCTCCAACGCGACAGCGCACTAACCACGTTGCGCCTCTCATAACCCCCGC
ATATCGAAAAGGAGTACCAC

Downstream 100 bases:

>100_bases
AAAAAGTCCTCACTACCCCCATCAAGGACGAAGATCTTGCGGATCTCAAGGTTGGCGACGTCGTCTATCTGACCGGCCGC
CTGGTGACCTGCCGCGACGT

Product: tartrate dehydratase subunit alpha

Products: NA

Alternate protein names: L-TTD alpha [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDTEAAVQSLTDTMAKFTAYIGKRLPTDVKKKLAELRTMETNPLAKSIYDSMAGNQEAADKLDRPSCQDTGVIQYFVEAG
ANFPLLGELEEILKEATAEATRMGPLRHNAVETFDEKNTGTNTGTQIPWLDWRIVPGLDSCTIDVYMAGGGCTLPGAAKV
LMPGQGYEGVAEFVMDVITERGVNACPPLLVGVGVSTSVETAARLSKLAIMRPVDSRSANPRAALMEDLLEQGLNEVGIG
PQGLTGNNSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIRINADMSYEIISHEGVVL

Sequences:

>Translated_299_residues
MDTEAAVQSLTDTMAKFTAYIGKRLPTDVKKKLAELRTMETNPLAKSIYDSMAGNQEAADKLDRPSCQDTGVIQYFVEAG
ANFPLLGELEEILKEATAEATRMGPLRHNAVETFDEKNTGTNTGTQIPWLDWRIVPGLDSCTIDVYMAGGGCTLPGAAKV
LMPGQGYEGVAEFVMDVITERGVNACPPLLVGVGVSTSVETAARLSKLAIMRPVDSRSANPRAALMEDLLEQGLNEVGIG
PQGLTGNNSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIRINADMSYEIISHEGVVL
>Mature_299_residues
MDTEAAVQSLTDTMAKFTAYIGKRLPTDVKKKLAELRTMETNPLAKSIYDSMAGNQEAADKLDRPSCQDTGVIQYFVEAG
ANFPLLGELEEILKEATAEATRMGPLRHNAVETFDEKNTGTNTGTQIPWLDWRIVPGLDSCTIDVYMAGGGCTLPGAAKV
LMPGQGYEGVAEFVMDVITERGVNACPPLLVGVGVSTSVETAARLSKLAIMRPVDSRSANPRAALMEDLLEQGLNEVGIG
PQGLTGNNSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIRINADMSYEIISHEGVVL

Specific function: Unknown

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789442, Length=293, Percent_Identity=60.7508532423208, Blast_Score=370, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004646 [H]

Pfam domain/function: PF05681 Fumerase [H]

EC number: =4.2.1.32 [H]

Molecular weight: Translated: 31982; Mature: 31982

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTEAAVQSLTDTMAKFTAYIGKRLPTDVKKKLAELRTMETNPLAKSIYDSMAGNQEAAD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
KLDRPSCQDTGVIQYFVEAGANFPLLGELEEILKEATAEATRMGPLRHNAVETFDEKNTG
HCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
TNTGTQIPWLDWRIVPGLDSCTIDVYMAGGGCTLPGAAKVLMPGQGYEGVAEFVMDVITE
CCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
RGVNACPPLLVGVGVSTSVETAARLSKLAIMRPVDSRSANPRAALMEDLLEQGLNEVGIG
CCCCCCCHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHCCC
PQGLTGNNSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIRINADMSYEIISHEGVVL
CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCEECCCCEEECCCCEEEEECCCCCCC
>Mature Secondary Structure
MDTEAAVQSLTDTMAKFTAYIGKRLPTDVKKKLAELRTMETNPLAKSIYDSMAGNQEAAD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
KLDRPSCQDTGVIQYFVEAGANFPLLGELEEILKEATAEATRMGPLRHNAVETFDEKNTG
HCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
TNTGTQIPWLDWRIVPGLDSCTIDVYMAGGGCTLPGAAKVLMPGQGYEGVAEFVMDVITE
CCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
RGVNACPPLLVGVGVSTSVETAARLSKLAIMRPVDSRSANPRAALMEDLLEQGLNEVGIG
CCCCCCCHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHCCC
PQGLTGNNSVMGVNIESSARHPSTIGVAVNTGCWAHRRGKIRINADMSYEIISHEGVVL
CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCEECCCCEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]