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The map label for this gene is nirS [H]

Identifier: 73538843

GI number: 73538843

Start: 1749701

End: 1751212

Strand: Direct

Name: nirS [H]

Synonym: Reut_B5018

Alternate gene names: 73538843

Gene position: 1749701-1751212 (Clockwise)

Preceding gene: 73538842

Following gene: 73538844

Centisome position: 64.18

GC content: 67.66

Gene sequence:

>1512_bases
ATGAACCGCTTCCTGCAATGGCTGGCGGCGTGCGTGCTCGCAGGCCTGTGCCAGACGGCGGCCATAGGCGGGCAAGCGGC
CACCGTCGACGCCGCCGCGCTATACGGACAGCATTGCGCCGCATGTCACGGCGCCGACCGTCTTGGCGCGATGGGCCCCG
CGCTGCTGCCCGAGAGCCTGGAGCGCCTGCGCCCGGCCGAGCTGGCCACGGTGCTGCGCGAAGGCCGGGCGGCTACGCAG
ATGCCGGGTTTTGCGGGCCAGCTCGACGACGCCAAACTGACGGACCTCGCCGCATGGTTGCGCACCGGGCCCGCGACCTC
GCGGCCGTGGGCTGCCGCCGACATCCGCGTTAGTCATATCGTGTACCCCGCGACGGATAGCCTTCCCGCCACGCCCGTGT
TCAAGGCCGACCCGGCCAACCTGTTTCTCGTCGTGGAAGCCGGCAGCCATCATATCAGCGTGCTCGATGGCGACCGCCTC
GAGCCGATCCACCGCTTCCGCACGCGTTTCGCGCTACATGGCGGCCCGAAGTTCAGCCAGGACGGCCGCTATGTGTTCAT
GGCTAGCCGCGATGGCTGGGTCAGCAAGTACGACCTGTGGAACCTGACCTTCACGGCGGAGATCCGCGTCGGCCTGAACA
CGCGCAATGTGGCCGTCAGCGATGATGGCAAGTGGGTGCTGGCCGGCAACACCTTGCCGCAGACGCTGGTGCTACTGCGC
GCCGACGACCTGGCGCTGGCCTCGGTCATCGACGTCAAAGGCCGGAACGGCCGGGCGTCGCGGGTATCGGCCGTTTATGA
TGCCGCGCCGCGGCACAGCTTCATCGTCGCGCTCAAGGACATTCCGGAGGTCTGGGAGATCCCTTACGTCAGCATGAAAG
CCGGCACCGCGCCCGCAACGAGGATGATCGCGCTGGACGACGTACTCGACGACTTCTACTTCGACCAGTCATACCGGCAC
ATCCTGGGCGCATCGCGGGATGGCGGCGGGCAGGTCGTCGACCTCGCGCATGGCCGCAAGGTGGCCGCCCTGGCGCTGTC
GGGCATGCCCCATCTCGGCAGCGGGATCACGTGGGTGCGCGACGGTCACGAGGTCATGGCGTCGCCCAACCTGAAGCAAG
GCAGCATCAGCGTGATCGACATGCAGAGCTGGCAGACCGTTGCCACGGTGCCGACCAACGGGCCGGGCTTCTTCCTGCGC
AGCCACGAGAACACGCCCTATGCCTGGGCCGATGCCATGATGAGCCCGAAGCGCGACACGCTGCAGCTGATCGACAAGCA
GACGCTGGCCGTGGCCGGCAGCGTGACGCCGAGCCCGGGCCGCACCGCCGCCCATGTGGAATTCACGCGCGACGGCCGCT
ATGCGCTGGTCAGCGTGATGGAGCGCGATGGCGCCATCGTGGTGTACGACGCGCGCACGGTGCGCGAGGTCAAGCGCATC
CCGATGGACAAGCCCATCGGCAAGTACAACGTATTCAACAAGACCACTCGCTCGTCCGGCACCAGCCACTGA

Upstream 100 bases:

>100_bases
TGCGCGCGGCCGCGGTGACCGGCAATCCATGGGCGCAAGACCCCGGCTGCTACCTGACCGACGAGGAACTTGCCATGCAG
CTCGGTGCGGAGGTCGCCGC

Downstream 100 bases:

>100_bases
CGCTCGCCACGAAAGATAAATGGACTCCCCATGAACCCTCCCCTCAAGCCCGGCAAGGTATGGCTGGTCGGCGCCGGCCC
CGGCAGCCCCGAACTCGTCA

Product: nitrite reductase (NO-forming)

Products: NA

Alternate protein names: Cytochrome cd1; Cytochrome oxidase; Hydroxylamine reductase [H]

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MNRFLQWLAACVLAGLCQTAAIGGQAATVDAAALYGQHCAACHGADRLGAMGPALLPESLERLRPAELATVLREGRAATQ
MPGFAGQLDDAKLTDLAAWLRTGPATSRPWAAADIRVSHIVYPATDSLPATPVFKADPANLFLVVEAGSHHISVLDGDRL
EPIHRFRTRFALHGGPKFSQDGRYVFMASRDGWVSKYDLWNLTFTAEIRVGLNTRNVAVSDDGKWVLAGNTLPQTLVLLR
ADDLALASVIDVKGRNGRASRVSAVYDAAPRHSFIVALKDIPEVWEIPYVSMKAGTAPATRMIALDDVLDDFYFDQSYRH
ILGASRDGGGQVVDLAHGRKVAALALSGMPHLGSGITWVRDGHEVMASPNLKQGSISVIDMQSWQTVATVPTNGPGFFLR
SHENTPYAWADAMMSPKRDTLQLIDKQTLAVAGSVTPSPGRTAAHVEFTRDGRYALVSVMERDGAIVVYDARTVREVKRI
PMDKPIGKYNVFNKTTRSSGTSH

Sequences:

>Translated_503_residues
MNRFLQWLAACVLAGLCQTAAIGGQAATVDAAALYGQHCAACHGADRLGAMGPALLPESLERLRPAELATVLREGRAATQ
MPGFAGQLDDAKLTDLAAWLRTGPATSRPWAAADIRVSHIVYPATDSLPATPVFKADPANLFLVVEAGSHHISVLDGDRL
EPIHRFRTRFALHGGPKFSQDGRYVFMASRDGWVSKYDLWNLTFTAEIRVGLNTRNVAVSDDGKWVLAGNTLPQTLVLLR
ADDLALASVIDVKGRNGRASRVSAVYDAAPRHSFIVALKDIPEVWEIPYVSMKAGTAPATRMIALDDVLDDFYFDQSYRH
ILGASRDGGGQVVDLAHGRKVAALALSGMPHLGSGITWVRDGHEVMASPNLKQGSISVIDMQSWQTVATVPTNGPGFFLR
SHENTPYAWADAMMSPKRDTLQLIDKQTLAVAGSVTPSPGRTAAHVEFTRDGRYALVSVMERDGAIVVYDARTVREVKRI
PMDKPIGKYNVFNKTTRSSGTSH
>Mature_503_residues
MNRFLQWLAACVLAGLCQTAAIGGQAATVDAAALYGQHCAACHGADRLGAMGPALLPESLERLRPAELATVLREGRAATQ
MPGFAGQLDDAKLTDLAAWLRTGPATSRPWAAADIRVSHIVYPATDSLPATPVFKADPANLFLVVEAGSHHISVLDGDRL
EPIHRFRTRFALHGGPKFSQDGRYVFMASRDGWVSKYDLWNLTFTAEIRVGLNTRNVAVSDDGKWVLAGNTLPQTLVLLR
ADDLALASVIDVKGRNGRASRVSAVYDAAPRHSFIVALKDIPEVWEIPYVSMKAGTAPATRMIALDDVLDDFYFDQSYRH
ILGASRDGGGQVVDLAHGRKVAALALSGMPHLGSGITWVRDGHEVMASPNLKQGSISVIDMQSWQTVATVPTNGPGFFLR
SHENTPYAWADAMMSPKRDTLQLIDKQTLAVAGSVTPSPGRTAAHVEFTRDGRYALVSVMERDGAIVVYDARTVREVKRI
PMDKPIGKYNVFNKTTRSSGTSH

Specific function: Inactivation of this cytochrome oxidase results in the loss of nitrite and nitric oxide reductase activities, but not of nitrous oxide reductase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR011048
- InterPro:   IPR003143
- InterPro:   IPR015943 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.7.2.1; =1.7.99.1 [H]

Molecular weight: Translated: 54446; Mature: 54446

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFLQWLAACVLAGLCQTAAIGGQAATVDAAALYGQHCAACHGADRLGAMGPALLPESL
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHCHHHH
ERLRPAELATVLREGRAATQMPGFAGQLDDAKLTDLAAWLRTGPATSRPWAAADIRVSHI
HHCCHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEE
VYPATDSLPATPVFKADPANLFLVVEAGSHHISVLDGDRLEPIHRFRTRFALHGGPKFSQ
EEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHEEECCCCCCCC
DGRYVFMASRDGWVSKYDLWNLTFTAEIRVGLNTRNVAVSDDGKWVLAGNTLPQTLVLLR
CCCEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCEEEEECCCCEEEECCCCCCEEEEEE
ADDLALASVIDVKGRNGRASRVSAVYDAAPRHSFIVALKDIPEVWEIPYVSMKAGTAPAT
ECCCEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHCCCEEEEECCCCCCC
RMIALDDVLDDFYFDQSYRHILGASRDGGGQVVDLAHGRKVAALALSGMPHLGSGITWVR
EEEEHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEE
DGHEVMASPNLKQGSISVIDMQSWQTVATVPTNGPGFFLRSHENTPYAWADAMMSPKRDT
CCCCEECCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCHHHHHHCCCCHHH
LQLIDKQTLAVAGSVTPSPGRTAAHVEFTRDGRYALVSVMERDGAIVVYDARTVREVKRI
HHHHHHHHEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEECCCEEEEECHHHHHHHHHC
PMDKPIGKYNVFNKTTRSSGTSH
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRFLQWLAACVLAGLCQTAAIGGQAATVDAAALYGQHCAACHGADRLGAMGPALLPESL
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHCHHHH
ERLRPAELATVLREGRAATQMPGFAGQLDDAKLTDLAAWLRTGPATSRPWAAADIRVSHI
HHCCHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEE
VYPATDSLPATPVFKADPANLFLVVEAGSHHISVLDGDRLEPIHRFRTRFALHGGPKFSQ
EEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHEEECCCCCCCC
DGRYVFMASRDGWVSKYDLWNLTFTAEIRVGLNTRNVAVSDDGKWVLAGNTLPQTLVLLR
CCCEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCEEEEECCCCEEEECCCCCCEEEEEE
ADDLALASVIDVKGRNGRASRVSAVYDAAPRHSFIVALKDIPEVWEIPYVSMKAGTAPAT
ECCCEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHCCCEEEEECCCCCCC
RMIALDDVLDDFYFDQSYRHILGASRDGGGQVVDLAHGRKVAALALSGMPHLGSGITWVR
EEEEHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEE
DGHEVMASPNLKQGSISVIDMQSWQTVATVPTNGPGFFLRSHENTPYAWADAMMSPKRDT
CCCCEECCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCHHHHHHCCCCHHH
LQLIDKQTLAVAGSVTPSPGRTAAHVEFTRDGRYALVSVMERDGAIVVYDARTVREVKRI
HHHHHHHHEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEECCCEEEEECHHHHHHHHHC
PMDKPIGKYNVFNKTTRSSGTSH
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7747927 [H]