| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yfiQ [C]
Identifier: 73538616
GI number: 73538616
Start: 1489743
End: 1491968
Strand: Reverse
Name: yfiQ [C]
Synonym: Reut_B4791
Alternate gene names: 73538616
Gene position: 1491968-1489743 (Counterclockwise)
Preceding gene: 73538626
Following gene: 73538615
Centisome position: 54.73
GC content: 69.32
Gene sequence:
>2226_bases ATGCCAGAATTCGTCCAACACGAGACAAACGCCCTTTCCTGGAAGAGACCACCCATGAAGACCTCTGACATTTCCGGCAC GCAGGCCGGACAGCCCGAACCGGCGGCAGAACCCGCAGTGGCTGACGTGACCTGCGTCCTCCGCCCGGCTTCCGTGGCCA TCGTCGGCGCTTCGGCGGACCCGCGCTCGTTTGGCGGCTTCGTGCTGGCGAACCTGGAGCGCTTCGGCTACGCCGGCGCT ATTCATCTGGTCAGTCGCAGCAGCACCGAAATCAATGGCCGCGCCTGCGTGAAGTCGGTCGATGAAGTGCCGGCCGGCAT CGACCTGGCCGTGCTGGCGATTCCTGAGGCGGGCGTGCTGGACGCCGTGCGCAGTCTGGCCGCGAAGGGCACCCGTGCGG CGGTCCTGTTTGCGTCCGGCTATGCAGAAACCGGTGAGGCGGGCCGCGAACGGCAGGACCAGCTCGCTGCCGCCGCGCGC GACGCCGGCATGCTGCTGCTCGGACCGAACTGCATGGGCTTCACGAACTTCGAGGGCAACGTGCCCGTGACCTTCGAGGC GGTGCAGCCCTATCCGTGCAGCGGCCGGCCCGGTATCGGCGTGGTGGCGCAGAGCGGTGCGATGGCTGCCAATATGCGCG ATGCCTTCGTCGGCCGCGGCCTGCCGCTGACCGCGGTCGTCTCCACAGGAAATGAGGCATCGCTGGGCGCGGAGGATTTC GTTGCGCACTACATTGACGACCCGCAGACCCGCGTGCTGGCCGTGTACGCCGAACAGGTGCGCCGCCCGCGCACGTTCCT GGCGCTGGCGCGCAAGGCGCGCGAGGCCGGCAAACCGATCGTGATGCTGATGCCTGGCCGCAGCGAGCGCGCCCGCGAAG CGGCCCAGTCCCACACCGGCGCACTGGCTGGCGACCACGCCACAGCTTGTGTGGCGCTGGCACGCGAGGCCGTGGTACTG GTCGATACCCCTGACGAGCTTGTCGACGCTGCAGCCATCCTGCTGCGTTTCCCGGTGCCGCCTGCTGGCGGCCCGGCTTT TATGACCGGGTCCGGCGCGATGAAGAACGTCGCGCTGGACTTCTGCGACGGGCTGGGGTTGGAGCTGCCGCCACTCGGTG CGCAGACAACGGCAAGCCTCAAGGCGATGCTGCCGGACTATGCCGTCGCCGAGAACCCGCTCGACTACACCACCATCGGT GTACGGCAGCCCGGTCTGGTCGGCGAGGTCCTGCTGACCATGCTGTCCGATCCGGCCGTGGGCAGCATCGTTCTCAGCAT TCCGGCGGGCCCCGAAGTGGCCCAGCGCGACAAGGCCGAGCACATCGTTCCGGCGCTCGCCCGAGCCGGCAAGCCGGCCG TGCTGGTCGTGACCGGCGACAGCGGCCCGATCGAGCCGTTCTTTGTCGATGCGATCCGCGCCAGCGGCGTACCGTTCTTT CGCTCGCCGGACCGTGCCCTGCGCGCGCTTGCAAGAGTCTCCGCATATGGCGAGGCGCTTCAGCGCGCCGGCCGAGCGAC CCAATCCATTCCGGCGGCGGTGCCGCTACCCGGCACGGTTCCGCCTTCGGGGGTGTTCGCGGAATACCAGGGCAAGGCAT GGCTGGCTGCTGCGGGACTGACTGTGCCCGAAGGCGCGCTGGCGACGAGCGCCGATGATGCGACCGCGATCGCCGCGCGC ATCGGCTACCCCGTCGTCATCAAGGCGCAGGCGAGCGAACTGCCGCACAAGAGCGATGTTGGCGGCGTGATCGTCGGCCT GGCCGATGAAGCGGCGCTGCGTGCGGGCTGGGATCGCCTGCAGCAGAACATCGCCACGCATCGTCCGGGCCTGACGCTGG ATGGTGTGCTGGTCGAGGCCATGGGACCGCGCGGGCTGGAGCTGGTAGTCGGCGCGAGGCGTGACGCCGGCTGGGGACCG GTCGTGCTCGTGGGCCTCGGCGGCGTGTGGATCGAGGCGCTCAAGGATGTGCGGCTGATCCCGGCGGATCTTGCCGAAGC CGATGTCGTGCAGGAGCTGGGCCGGCTGAAAGCCGCGTCGCTGCTGCGCGGCATCCGCGGTGCGGCAGCGGTCGACGTGG CGGCGATCGCGCGGGCCGTGACGCTGATCGGCGCGCAGATGCGGGCCAATCCCGCGATCACCGAGATCGACGTCAATCCG CTCGTGGCCTATCCCGACCGCGTGCTCGCGCTCGACGCGTTGGTCGTCTGCGCCCAGGAAGTCTGA
Upstream 100 bases:
>100_bases GTGGCAACCAGTCCAGCGAATAGCGCTGTCCGGCTAGGGGAAACTCCCTACCAATTTCAAGAAAATTCGTTTTCTGGTGT ATTGAAACTGCATTACTGGT
Downstream 100 bases:
>100_bases AACCCGGCCTGAACCCACGGCATATATCATGAAGCTGACTTTTTCCCCCGCCGACGAGGCGTTTCGCCAGGAGGTGCGTG CGTTCGTCAAGGCGAACCTG
Product: CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MPEFVQHETNALSWKRPPMKTSDISGTQAGQPEPAAEPAVADVTCVLRPASVAIVGASADPRSFGGFVLANLERFGYAGA IHLVSRSSTEINGRACVKSVDEVPAGIDLAVLAIPEAGVLDAVRSLAAKGTRAAVLFASGYAETGEAGRERQDQLAAAAR DAGMLLLGPNCMGFTNFEGNVPVTFEAVQPYPCSGRPGIGVVAQSGAMAANMRDAFVGRGLPLTAVVSTGNEASLGAEDF VAHYIDDPQTRVLAVYAEQVRRPRTFLALARKAREAGKPIVMLMPGRSERAREAAQSHTGALAGDHATACVALAREAVVL VDTPDELVDAAAILLRFPVPPAGGPAFMTGSGAMKNVALDFCDGLGLELPPLGAQTTASLKAMLPDYAVAENPLDYTTIG VRQPGLVGEVLLTMLSDPAVGSIVLSIPAGPEVAQRDKAEHIVPALARAGKPAVLVVTGDSGPIEPFFVDAIRASGVPFF RSPDRALRALARVSAYGEALQRAGRATQSIPAAVPLPGTVPPSGVFAEYQGKAWLAAAGLTVPEGALATSADDATAIAAR IGYPVVIKAQASELPHKSDVGGVIVGLADEAALRAGWDRLQQNIATHRPGLTLDGVLVEAMGPRGLELVVGARRDAGWGP VVLVGLGGVWIEALKDVRLIPADLAEADVVQELGRLKAASLLRGIRGAAAVDVAAIARAVTLIGAQMRANPAITEIDVNP LVAYPDRVLALDALVVCAQEV
Sequences:
>Translated_741_residues MPEFVQHETNALSWKRPPMKTSDISGTQAGQPEPAAEPAVADVTCVLRPASVAIVGASADPRSFGGFVLANLERFGYAGA IHLVSRSSTEINGRACVKSVDEVPAGIDLAVLAIPEAGVLDAVRSLAAKGTRAAVLFASGYAETGEAGRERQDQLAAAAR DAGMLLLGPNCMGFTNFEGNVPVTFEAVQPYPCSGRPGIGVVAQSGAMAANMRDAFVGRGLPLTAVVSTGNEASLGAEDF VAHYIDDPQTRVLAVYAEQVRRPRTFLALARKAREAGKPIVMLMPGRSERAREAAQSHTGALAGDHATACVALAREAVVL VDTPDELVDAAAILLRFPVPPAGGPAFMTGSGAMKNVALDFCDGLGLELPPLGAQTTASLKAMLPDYAVAENPLDYTTIG VRQPGLVGEVLLTMLSDPAVGSIVLSIPAGPEVAQRDKAEHIVPALARAGKPAVLVVTGDSGPIEPFFVDAIRASGVPFF RSPDRALRALARVSAYGEALQRAGRATQSIPAAVPLPGTVPPSGVFAEYQGKAWLAAAGLTVPEGALATSADDATAIAAR IGYPVVIKAQASELPHKSDVGGVIVGLADEAALRAGWDRLQQNIATHRPGLTLDGVLVEAMGPRGLELVVGARRDAGWGP VVLVGLGGVWIEALKDVRLIPADLAEADVVQELGRLKAASLLRGIRGAAAVDVAAIARAVTLIGAQMRANPAITEIDVNP LVAYPDRVLALDALVVCAQEV >Mature_740_residues PEFVQHETNALSWKRPPMKTSDISGTQAGQPEPAAEPAVADVTCVLRPASVAIVGASADPRSFGGFVLANLERFGYAGAI HLVSRSSTEINGRACVKSVDEVPAGIDLAVLAIPEAGVLDAVRSLAAKGTRAAVLFASGYAETGEAGRERQDQLAAAARD AGMLLLGPNCMGFTNFEGNVPVTFEAVQPYPCSGRPGIGVVAQSGAMAANMRDAFVGRGLPLTAVVSTGNEASLGAEDFV AHYIDDPQTRVLAVYAEQVRRPRTFLALARKAREAGKPIVMLMPGRSERAREAAQSHTGALAGDHATACVALAREAVVLV DTPDELVDAAAILLRFPVPPAGGPAFMTGSGAMKNVALDFCDGLGLELPPLGAQTTASLKAMLPDYAVAENPLDYTTIGV RQPGLVGEVLLTMLSDPAVGSIVLSIPAGPEVAQRDKAEHIVPALARAGKPAVLVVTGDSGPIEPFFVDAIRASGVPFFR SPDRALRALARVSAYGEALQRAGRATQSIPAAVPLPGTVPPSGVFAEYQGKAWLAAAGLTVPEGALATSADDATAIAARI GYPVVIKAQASELPHKSDVGGVIVGLADEAALRAGWDRLQQNIATHRPGLTLDGVLVEAMGPRGLELVVGARRDAGWGPV VLVGLGGVWIEALKDVRLIPADLAEADVVQELGRLKAASLLRGIRGAAAVDVAAIARAVTLIGAQMRANPAITEIDVNPL VAYPDRVLALDALVVCAQEV
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=715, Percent_Identity=23.9160839160839, Blast_Score=149, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 76462; Mature: 76330
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEFVQHETNALSWKRPPMKTSDISGTQAGQPEPAAEPAVADVTCVLRPASVAIVGASAD CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCC PRSFGGFVLANLERFGYAGAIHLVSRSSTEINGRACVKSVDEVPAGIDLAVLAIPEAGVL CCCCCCEEEEEHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHH DAVRSLAAKGTRAAVLFASGYAETGEAGRERQDQLAAAARDAGMLLLGPNCMGFTNFEGN HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCC VPVTFEAVQPYPCSGRPGIGVVAQSGAMAANMRDAFVGRGLPLTAVVSTGNEASLGAEDF CCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHH VAHYIDDPQTRVLAVYAEQVRRPRTFLALARKAREAGKPIVMLMPGRSERAREAAQSHTG HHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC ALAGDHATACVALAREAVVLVDTPDELVDAAAILLRFPVPPAGGPAFMTGSGAMKNVALD CCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH FCDGLGLELPPLGAQTTASLKAMLPDYAVAENPLDYTTIGVRQPGLVGEVLLTMLSDPAV HHCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCC GSIVLSIPAGPEVAQRDKAEHIVPALARAGKPAVLVVTGDSGPIEPFFVDAIRASGVPFF CEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCC RSPDRALRALARVSAYGEALQRAGRATQSIPAAVPLPGTVPPSGVFAEYQGKAWLAAAGL CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEECCC TVPEGALATSADDATAIAARIGYPVVIKAQASELPHKSDVGGVIVGLADEAALRAGWDRL CCCCCCCCCCCCCHHHHHHHCCCCEEEEECHHCCCCCCCCCEEEEEECCHHHHHHHHHHH QQNIATHRPGLTLDGVLVEAMGPRGLELVVGARRDAGWGPVVLVGLGGVWIEALKDVRLI HHHHHHCCCCCEECCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCEEC PADLAEADVVQELGRLKAASLLRGIRGAAAVDVAAIARAVTLIGAQMRANPAITEIDVNP CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC LVAYPDRVLALDALVVCAQEV EEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure PEFVQHETNALSWKRPPMKTSDISGTQAGQPEPAAEPAVADVTCVLRPASVAIVGASAD CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCC PRSFGGFVLANLERFGYAGAIHLVSRSSTEINGRACVKSVDEVPAGIDLAVLAIPEAGVL CCCCCCEEEEEHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHH DAVRSLAAKGTRAAVLFASGYAETGEAGRERQDQLAAAARDAGMLLLGPNCMGFTNFEGN HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCC VPVTFEAVQPYPCSGRPGIGVVAQSGAMAANMRDAFVGRGLPLTAVVSTGNEASLGAEDF CCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHH VAHYIDDPQTRVLAVYAEQVRRPRTFLALARKAREAGKPIVMLMPGRSERAREAAQSHTG HHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC ALAGDHATACVALAREAVVLVDTPDELVDAAAILLRFPVPPAGGPAFMTGSGAMKNVALD CCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH FCDGLGLELPPLGAQTTASLKAMLPDYAVAENPLDYTTIGVRQPGLVGEVLLTMLSDPAV HHCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCC GSIVLSIPAGPEVAQRDKAEHIVPALARAGKPAVLVVTGDSGPIEPFFVDAIRASGVPFF CEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCC RSPDRALRALARVSAYGEALQRAGRATQSIPAAVPLPGTVPPSGVFAEYQGKAWLAAAGL CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEECCC TVPEGALATSADDATAIAARIGYPVVIKAQASELPHKSDVGGVIVGLADEAALRAGWDRL CCCCCCCCCCCCCHHHHHHHCCCCEEEEECHHCCCCCCCCCEEEEEECCHHHHHHHHHHH QQNIATHRPGLTLDGVLVEAMGPRGLELVVGARRDAGWGPVVLVGLGGVWIEALKDVRLI HHHHHHCCCCCEECCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCEEC PADLAEADVVQELGRLKAASLLRGIRGAAAVDVAAIARAVTLIGAQMRANPAITEIDVNP CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC LVAYPDRVLALDALVVCAQEV EEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]