| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is pbpG [H]
Identifier: 73537508
GI number: 73537508
Start: 254026
End: 256065
Strand: Reverse
Name: pbpG [H]
Synonym: Reut_B3673
Alternate gene names: 73537508
Gene position: 256065-254026 (Counterclockwise)
Preceding gene: 73537509
Following gene: 73537507
Centisome position: 9.39
GC content: 68.38
Gene sequence:
>2040_bases ATGAAAAAATTCGCAGTCAAGGCAGGCGGCGCCGCTCTGGCGCTGGCTGCAGCCGGCGTGCTGCTCGCCGGTTTCGCCGC GGTCGTCAGCCTGCGGCAGCTTCCCCCCGTCGACGCCCTGCGCGAGTACCGGCCGGACGTGCCGCTGCGGATCTTCACGA GTGACAACGTGCAGATCGGCGAATTCGGCAGCGAGCACCGGGAATTCATCGCGTTCGACAAGATGCCGCGCCAGATGACG CAGGCATTGCTCGCCGCCGAGGACGACCAGTTCTACGAGCACGACGGCATCGACATCCCCGGCATGTTTCGCGCGGCGCT GGCCAATCTGGGCAAGGGCTATTCGCAGGGCGCCTCTACCATCACCATGCAGGTGGCGCGCAACTTCTACCTGTCACGCG AGAAGACGCTTGCGCGCAAGTGGTACGAGATCCTGCTCGCGTGGCAGATCGACCGTACGCTGTCCAAGGACCGCATCCTC GAGCTGTATATGAACCAGGTCTACCTGGGCGAGCATGCGTACGGTTTCGGCAGCGCGGCCCACGCGTACTTCGGCAAGCC GCTGGACGGCCTGTCGCTGGCCGAGACCGCGATGCTGGCCGGGCTGCCCAAGGCGCCTTCCACGATGAACCCGGTGGTGA ACTTCGCGCGCGCCAAGCGCCGGCAGGAGTATGTGCTCGGGCGGATGCTGGCGCTCGGCATGATCAGCCAGGACCAGTAC CGCGACGCCCGATCGGCGCAGTTGGACATCGCCCCCGACAATGCGGGCCAGTTCGCCGGGCACGCCGAATATGTCGCCGA ACTCGCGCGCCAGCTTGCGCGCGACCGCTTCGGCGATGAAGCCTACACGCGCGGCCTGAATGTCTACACCACGGTGTCGT CGGTGCGGCAAACCATGGCCTATGACGCCGTGCGGCGCGGACTGGAAGGCTACGGGAAGCGCCATCGCCTGGCCAGCCCG GCGGGCGCGCCGCAGGCGGCACTGGTTTCGCTCGATGGCGACACCGGCGCGATCGAGGCCATGGTCGGCGGCGCCGACTT CGACACCAACCGCTTCAACCATGCGACGCAGGCACTGCGCCAGCCCGGCTCGACGTTCAAGCCGTTCATCTATGCGGCGG CGCTCGAGCACGGCGTGTCGCCAGGCACGCTGATCAACGACGCGCCGCTCGACAACAACTCGCGCTGGCAGCCGTCCAAC GACGACGGCCGATTCCTGGGCGCGGTCACGGTGCGCCAAGCGCTGGCCGAGTCGCGCAACCTCCCGGCCATCCGCACGCT GCAGGCCATCGGCATTCCGTATGCGGTCGAGTTCGCCAGCCGCTTCGGCTTCTCGACCAAGCGGCTGCCGCGCTTCCTGC CGCTGGCGCTGGGCACCGGCACGACGTCGCCGCTGCGGCTCGCGTCGGCGTATGCGGTGTTTGCCAACCAGGGCCATCGC GTGGAGCCTTACCTGATCTCGCGCATTACCGACAGCGAAGGCCACGTGCTGTTCGCGGCCGACAATGCCACGGAGCCGCC GCGCGTCATCAGCGAACGCAATGCCTTCGTGATGGACAGCCTGCTGCGCAGCGTGGTGGACGACGGCACTGGCGCGGGCG TGCGCCGCTATCTGCACCGCGAGGATGTGGCGGGCAAGACCGGCACCACCAACGACTCGGTCGACGGCTGGTTCGCGGGC TACGCCGGCAACGTGGTCACGGTGGCCTGGATGGGCTATGACGACAACCATAGCCTGGGCGCCCATGAATTCGGCGCCAC CACCGCGCTGCCGATCTGGGCTTCGTATATGGAAGGCCGGATGGCAGGCACCCCGGTGGCCGAGCGGGCCGCACCGTCCG GGGTCGTGCGCAGCAGCGGCGACTGGACGTATGCGGAATATGCCGACGGCAGGCAAGGTATCGCCTCGCTCGGCTTCCCG GCGCCGCTACCCGCGCCAGCACAGGATGCCGCCGCCACACCGGTAGCCAGCGAAGCCGTTGGCCTGCCCGGCCAGCCCGC AGCACCGGCCGCGAGCCGCGACGACAGGGCAAGCCTGTAG
Upstream 100 bases:
>100_bases CAGCATGATCCGCTGCCGGACACACCGCGCACGGCTCCGACAGACCATGACGAGTCCGGTGTGCCTCTGCCGCTGCCCCG GTTCCGCTAGAATTGCGCGC
Downstream 100 bases:
>100_bases TCAAGCATCTGGGCTGCAGCGCCCTCCTTTCAACCTCTCAACAACAAGAACCACAATGTCGAGCGTCAGCGCGGTATTGA TCTGGGCAATTGCTGCCCTC
Product: penicillin-binding protein 1A
Products: NA
Alternate protein names: PBP-2D; PBP2d [H]
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MKKFAVKAGGAALALAAAGVLLAGFAAVVSLRQLPPVDALREYRPDVPLRIFTSDNVQIGEFGSEHREFIAFDKMPRQMT QALLAAEDDQFYEHDGIDIPGMFRAALANLGKGYSQGASTITMQVARNFYLSREKTLARKWYEILLAWQIDRTLSKDRIL ELYMNQVYLGEHAYGFGSAAHAYFGKPLDGLSLAETAMLAGLPKAPSTMNPVVNFARAKRRQEYVLGRMLALGMISQDQY RDARSAQLDIAPDNAGQFAGHAEYVAELARQLARDRFGDEAYTRGLNVYTTVSSVRQTMAYDAVRRGLEGYGKRHRLASP AGAPQAALVSLDGDTGAIEAMVGGADFDTNRFNHATQALRQPGSTFKPFIYAAALEHGVSPGTLINDAPLDNNSRWQPSN DDGRFLGAVTVRQALAESRNLPAIRTLQAIGIPYAVEFASRFGFSTKRLPRFLPLALGTGTTSPLRLASAYAVFANQGHR VEPYLISRITDSEGHVLFAADNATEPPRVISERNAFVMDSLLRSVVDDGTGAGVRRYLHREDVAGKTGTTNDSVDGWFAG YAGNVVTVAWMGYDDNHSLGAHEFGATTALPIWASYMEGRMAGTPVAERAAPSGVVRSSGDWTYAEYADGRQGIASLGFP APLPAPAQDAAATPVASEAVGLPGQPAAPAASRDDRASL
Sequences:
>Translated_679_residues MKKFAVKAGGAALALAAAGVLLAGFAAVVSLRQLPPVDALREYRPDVPLRIFTSDNVQIGEFGSEHREFIAFDKMPRQMT QALLAAEDDQFYEHDGIDIPGMFRAALANLGKGYSQGASTITMQVARNFYLSREKTLARKWYEILLAWQIDRTLSKDRIL ELYMNQVYLGEHAYGFGSAAHAYFGKPLDGLSLAETAMLAGLPKAPSTMNPVVNFARAKRRQEYVLGRMLALGMISQDQY RDARSAQLDIAPDNAGQFAGHAEYVAELARQLARDRFGDEAYTRGLNVYTTVSSVRQTMAYDAVRRGLEGYGKRHRLASP AGAPQAALVSLDGDTGAIEAMVGGADFDTNRFNHATQALRQPGSTFKPFIYAAALEHGVSPGTLINDAPLDNNSRWQPSN DDGRFLGAVTVRQALAESRNLPAIRTLQAIGIPYAVEFASRFGFSTKRLPRFLPLALGTGTTSPLRLASAYAVFANQGHR VEPYLISRITDSEGHVLFAADNATEPPRVISERNAFVMDSLLRSVVDDGTGAGVRRYLHREDVAGKTGTTNDSVDGWFAG YAGNVVTVAWMGYDDNHSLGAHEFGATTALPIWASYMEGRMAGTPVAERAAPSGVVRSSGDWTYAEYADGRQGIASLGFP APLPAPAQDAAATPVASEAVGLPGQPAAPAASRDDRASL >Mature_679_residues MKKFAVKAGGAALALAAAGVLLAGFAAVVSLRQLPPVDALREYRPDVPLRIFTSDNVQIGEFGSEHREFIAFDKMPRQMT QALLAAEDDQFYEHDGIDIPGMFRAALANLGKGYSQGASTITMQVARNFYLSREKTLARKWYEILLAWQIDRTLSKDRIL ELYMNQVYLGEHAYGFGSAAHAYFGKPLDGLSLAETAMLAGLPKAPSTMNPVVNFARAKRRQEYVLGRMLALGMISQDQY RDARSAQLDIAPDNAGQFAGHAEYVAELARQLARDRFGDEAYTRGLNVYTTVSSVRQTMAYDAVRRGLEGYGKRHRLASP AGAPQAALVSLDGDTGAIEAMVGGADFDTNRFNHATQALRQPGSTFKPFIYAAALEHGVSPGTLINDAPLDNNSRWQPSN DDGRFLGAVTVRQALAESRNLPAIRTLQAIGIPYAVEFASRFGFSTKRLPRFLPLALGTGTTSPLRLASAYAVFANQGHR VEPYLISRITDSEGHVLFAADNATEPPRVISERNAFVMDSLLRSVVDDGTGAGVRRYLHREDVAGKTGTTNDSVDGWFAG YAGNVVTVAWMGYDDNHSLGAHEFGATTALPIWASYMEGRMAGTPVAERAAPSGVVRSSGDWTYAEYADGRQGIASLGFP APLPAPAQDAAATPVASEAVGLPGQPAAPAASRDDRASL
Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786343, Length=547, Percent_Identity=34.5521023765996, Blast_Score=265, Evalue=9e-72, Organism=Escherichia coli, GI87082258, Length=367, Percent_Identity=40.8719346049046, Blast_Score=259, Evalue=3e-70, Organism=Escherichia coli, GI1788867, Length=638, Percent_Identity=28.8401253918495, Blast_Score=172, Evalue=5e-44, Organism=Escherichia coli, GI1789601, Length=169, Percent_Identity=33.1360946745562, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.1.129; 3.4.-.- [C]
Molecular weight: Translated: 73151; Mature: 73151
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFAVKAGGAALALAAAGVLLAGFAAVVSLRQLPPVDALREYRPDVPLRIFTSDNVQIG CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEEC EFGSEHREFIAFDKMPRQMTQALLAAEDDQFYEHDGIDIPGMFRAALANLGKGYSQGAST CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHH ITMQVARNFYLSREKTLARKWYEILLAWQIDRTLSKDRILELYMNQVYLGEHAYGFGSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH HAYFGKPLDGLSLAETAMLAGLPKAPSTMNPVVNFARAKRRQEYVLGRMLALGMISQDQY HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RDARSAQLDIAPDNAGQFAGHAEYVAELARQLARDRFGDEAYTRGLNVYTTVSSVRQTMA CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH YDAVRRGLEGYGKRHRLASPAGAPQAALVSLDGDTGAIEAMVGGADFDTNRFNHATQALR HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHH QPGSTFKPFIYAAALEHGVSPGTLINDAPLDNNSRWQPSNDDGRFLGAVTVRQALAESRN CCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCC LPAIRTLQAIGIPYAVEFASRFGFSTKRLPRFLPLALGTGTTSPLRLASAYAVFANQGHR CCHHHHHHHHCCCHHHHHHHHCCCCHHHCHHHHHHEECCCCCCHHHHHHHHHHHHCCCCC VEPYLISRITDSEGHVLFAADNATEPPRVISERNAFVMDSLLRSVVDDGTGAGVRRYLHR CCHHHEEEEECCCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH EDVAGKTGTTNDSVDGWFAGYAGNVVTVAWMGYDDNHSLGAHEFGATTALPIWASYMEGR HHCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCC MAGTPVAERAAPSGVVRSSGDWTYAEYADGRQGIASLGFPAPLPAPAQDAAATPVASEAV CCCCCHHHHCCCCCCEECCCCEEEHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHC GLPGQPAAPAASRDDRASL CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKFAVKAGGAALALAAAGVLLAGFAAVVSLRQLPPVDALREYRPDVPLRIFTSDNVQIG CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEEC EFGSEHREFIAFDKMPRQMTQALLAAEDDQFYEHDGIDIPGMFRAALANLGKGYSQGAST CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHH ITMQVARNFYLSREKTLARKWYEILLAWQIDRTLSKDRILELYMNQVYLGEHAYGFGSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH HAYFGKPLDGLSLAETAMLAGLPKAPSTMNPVVNFARAKRRQEYVLGRMLALGMISQDQY HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RDARSAQLDIAPDNAGQFAGHAEYVAELARQLARDRFGDEAYTRGLNVYTTVSSVRQTMA CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH YDAVRRGLEGYGKRHRLASPAGAPQAALVSLDGDTGAIEAMVGGADFDTNRFNHATQALR HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHH QPGSTFKPFIYAAALEHGVSPGTLINDAPLDNNSRWQPSNDDGRFLGAVTVRQALAESRN CCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCC LPAIRTLQAIGIPYAVEFASRFGFSTKRLPRFLPLALGTGTTSPLRLASAYAVFANQGHR CCHHHHHHHHCCCHHHHHHHHCCCCHHHCHHHHHHEECCCCCCHHHHHHHHHHHHCCCCC VEPYLISRITDSEGHVLFAADNATEPPRVISERNAFVMDSLLRSVVDDGTGAGVRRYLHR CCHHHEEEEECCCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH EDVAGKTGTTNDSVDGWFAGYAGNVVTVAWMGYDDNHSLGAHEFGATTALPIWASYMEGR HHCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCC MAGTPVAERAAPSGVVRSSGDWTYAEYADGRQGIASLGFPAPLPAPAQDAAATPVASEAV CCCCCHHHHCCCCCCEECCCCEEEHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHC GLPGQPAAPAASRDDRASL CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]