| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73543073
Identifier: 73543073
GI number: 73543073
Start: 3718319
End: 3718837
Strand: Reverse
Name: 73543073
Synonym: Reut_A3391
Alternate gene names: NA
Gene position: 3718837-3718319 (Counterclockwise)
Preceding gene: 73543076
Following gene: 73543068
Centisome position: 97.7
GC content: 60.69
Gene sequence:
>519_bases ATGGCTGACAAGGCAAAGCGCAAGGACAGCGACAAGGAAAAGAAGGCGGTCAAGTCGGCAAGCGACCGCATCGAGGTGCG CCAGTCTGGCGTGCATGGCAAGGGGGTCTACGCGATTGCGCCGATCGCAGAGGGGGAGCGCGTAATCGAGTACAAGGGCG AGCACATTTCCTGGAAGAAGGCCCTGGATCGCCATCCGCACGATCCGAACGACCCCAACCACACGTTCTATTTCAGCCTG GACGACGGCAGCGTGATCGACGCCAAGTTCGGCGGTAACCGCGCGCGCTGGATCAACCATGCGTGTACCCCGAACTGCGA GGCGCGCGAAAAGAAGGGCCGCGTGTTCATCCACGCGTTGCGCGACATTGCCACCGGCGAAGAGCTTTTCTATGACTACG GGTTGGTGATTGACGCCCGCTATACGAAGAAGCTCAAGAAGGAATTCGAGTGCCGTTGTGGCAGCCCGGACTGCCGCGGC ACCATGCTGGCGCCGAAGGGCAAGACGTCGTCGAAGTAA
Upstream 100 bases:
>100_bases GCATGCGTATACGGTGGCCATGGCACCCCGGTATCATGCCGATCGCGCCGACTGAACCGGCGCCGGCAACGCAACGGTAG CGACCAGCACGGAAAGGCAA
Downstream 100 bases:
>100_bases GCGGGCAAGCAAAGCCTGCCCGCCGCAAGCGTCAGGCGGCTAGGCCGGCAGCCTCGCACGGGATACGGATCACAAAGCGC ATGGTCGCGCGCCGCTCGGC
Product: nuclear protein SET
Products: NA
Alternate protein names: Histone-Lysine N-Methyltransferase; SET Domain-Containing Protein; SET Domain Protein; Set Domain Protein; HistoNe-Lysine N-Methyltransferase H3 Lysine-4 Specific; Setd1a Protein; Nuclear Protein Set; Zinc Finger Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MADKAKRKDSDKEKKAVKSASDRIEVRQSGVHGKGVYAIAPIAEGERVIEYKGEHISWKKALDRHPHDPNDPNHTFYFSL DDGSVIDAKFGGNRARWINHACTPNCEAREKKGRVFIHALRDIATGEELFYDYGLVIDARYTKKLKKEFECRCGSPDCRG TMLAPKGKTSSK
Sequences:
>Translated_172_residues MADKAKRKDSDKEKKAVKSASDRIEVRQSGVHGKGVYAIAPIAEGERVIEYKGEHISWKKALDRHPHDPNDPNHTFYFSL DDGSVIDAKFGGNRARWINHACTPNCEAREKKGRVFIHALRDIATGEELFYDYGLVIDARYTKKLKKEFECRCGSPDCRG TMLAPKGKTSSK >Mature_171_residues ADKAKRKDSDKEKKAVKSASDRIEVRQSGVHGKGVYAIAPIAEGERVIEYKGEHISWKKALDRHPHDPNDPNHTFYFSLD DGSVIDAKFGGNRARWINHACTPNCEAREKKGRVFIHALRDIATGEELFYDYGLVIDARYTKKLKKEFECRCGSPDCRGT MLAPKGKTSSK
Specific function: Unknown
COG id: COG2940
COG function: function code R; Proteins containing SET domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56550039, Length=146, Percent_Identity=35.6164383561644, Blast_Score=89, Evalue=1e-18, Organism=Homo sapiens, GI7662046, Length=146, Percent_Identity=36.986301369863, Blast_Score=87, Evalue=9e-18, Organism=Homo sapiens, GI210032580, Length=139, Percent_Identity=35.9712230215827, Blast_Score=84, Evalue=6e-17, Organism=Homo sapiens, GI110349788, Length=148, Percent_Identity=34.4594594594595, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI55741677, Length=160, Percent_Identity=33.125, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI19913358, Length=145, Percent_Identity=37.2413793103448, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI19913350, Length=145, Percent_Identity=37.2413793103448, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI19913348, Length=145, Percent_Identity=37.2413793103448, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI109633019, Length=145, Percent_Identity=37.2413793103448, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI91718902, Length=157, Percent_Identity=31.8471337579618, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI27477095, Length=145, Percent_Identity=33.1034482758621, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI156142197, Length=147, Percent_Identity=35.3741496598639, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI156142199, Length=147, Percent_Identity=35.3741496598639, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI224465233, Length=161, Percent_Identity=34.7826086956522, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI21361095, Length=109, Percent_Identity=39.4495412844037, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI23510384, Length=109, Percent_Identity=39.4495412844037, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI19923586, Length=151, Percent_Identity=32.4503311258278, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI197313748, Length=144, Percent_Identity=31.9444444444444, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI148762969, Length=145, Percent_Identity=32.4137931034483, Blast_Score=64, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17552316, Length=144, Percent_Identity=35.4166666666667, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193210440, Length=154, Percent_Identity=35.7142857142857, Blast_Score=85, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17552318, Length=144, Percent_Identity=35.4166666666667, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17552320, Length=144, Percent_Identity=35.4166666666667, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25148423, Length=137, Percent_Identity=37.956204379562, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25148426, Length=137, Percent_Identity=37.956204379562, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71988186, Length=138, Percent_Identity=37.6811594202899, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17565204, Length=159, Percent_Identity=28.9308176100629, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71993684, Length=142, Percent_Identity=30.2816901408451, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321911, Length=173, Percent_Identity=35.2601156069364, Blast_Score=98, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6322293, Length=153, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=3e-12, Organism=Drosophila melanogaster, GI62472551, Length=152, Percent_Identity=35.5263157894737, Blast_Score=90, Evalue=7e-19, Organism=Drosophila melanogaster, GI17136558, Length=152, Percent_Identity=35.5263157894737, Blast_Score=90, Evalue=7e-19, Organism=Drosophila melanogaster, GI19550181, Length=152, Percent_Identity=35.5263157894737, Blast_Score=90, Evalue=7e-19, Organism=Drosophila melanogaster, GI19550184, Length=152, Percent_Identity=35.5263157894737, Blast_Score=90, Evalue=9e-19, Organism=Drosophila melanogaster, GI17136556, Length=152, Percent_Identity=35.5263157894737, Blast_Score=90, Evalue=9e-19, Organism=Drosophila melanogaster, GI28571451, Length=157, Percent_Identity=33.7579617834395, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI24639197, Length=157, Percent_Identity=33.7579617834395, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI17737643, Length=134, Percent_Identity=35.0746268656716, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24650756, Length=147, Percent_Identity=34.6938775510204, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI18543183, Length=135, Percent_Identity=32.5925925925926, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24641786, Length=133, Percent_Identity=33.8345864661654, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI281360813, Length=133, Percent_Identity=33.8345864661654, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19382; Mature: 19251
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50280 SET ; PS50868 POST_SET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKAKRKDSDKEKKAVKSASDRIEVRQSGVHGKGVYAIAPIAEGERVIEYKGEHISWKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHH ALDRHPHDPNDPNHTFYFSLDDGSVIDAKFGGNRARWINHACTPNCEAREKKGRVFIHAL HHHCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHEEECCCCCCCCCCHHHCCCEEEEEH RDIATGEELFYDYGLVIDARYTKKLKKEFECRCGSPDCRGTMLAPKGKTSSK HHHCCCHHHHEECCEEEEHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure ADKAKRKDSDKEKKAVKSASDRIEVRQSGVHGKGVYAIAPIAEGERVIEYKGEHISWKK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHH ALDRHPHDPNDPNHTFYFSLDDGSVIDAKFGGNRARWINHACTPNCEAREKKGRVFIHAL HHHCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHEEECCCCCCCCCCHHHCCCEEEEEH RDIATGEELFYDYGLVIDARYTKKLKKEFECRCGSPDCRGTMLAPKGKTSSK HHHCCCHHHHEECCEEEEHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA