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The map label for this gene is bkdR [H]

Identifier: 73543068

GI number: 73543068

Start: 3713734

End: 3714207

Strand: Reverse

Name: bkdR [H]

Synonym: Reut_A3386

Alternate gene names: 73543068

Gene position: 3714207-3713734 (Counterclockwise)

Preceding gene: 73543073

Following gene: 73543067

Centisome position: 97.57

GC content: 66.67

Gene sequence:

>474_bases
ATGGTGTCGCTTGACCAGTTTGACCTTGCCCTGATTGCGGCGCTGCAGGCAGACGGGCGCTCGACCCACCAGCAGCTCGC
CGAGCGCGTACACCTGTCGCCGAGCCAGGTCGGCCGGCGGCTGGCCCGGCTGGAGGCCGATGGCGTCATCACGGGCTACC
GCGTGAGCCTGTCGACCCAGGCGCTGGGGCTGGGCGTGCAGGTGTTCATCAGCGTCAAGCTGGCCCACCACGGCGACACC
ATCATCGAGCGCTTCGCCGAGGAGATCCTGCTGCTCGAGGAAGTGCAGGAGTGCTATTCCGTCGCGGGCGAGGCCGACTA
CCTGATTCGCGTGGTCGTGCCCGACCTCCCCACGCTGGCCGACTTCACCATGAAGCGGCTGATGCGCGTGCCCGGCGTGG
AAAGCGTGCGTTCCAATATTGTCCTGACTGCGTTGAAGTCCGAAGGCGCCTTGCCGCTGTCTCACCTGCGCTGA

Upstream 100 bases:

>100_bases
TTAGGCGTGTGGTGCTGCAATTCGGCCGCAAAATGGGCTGCTTTGCGGACTCTCGTGCGTATAATCCGCGCTATATCGAG
AGTGAATGCGGGAATCACGT

Downstream 100 bases:

>100_bases
AATATTTGTCGGCCGCCTTGCAGGTTTGCGTGCCGGCCTTGCACTCCTAAACGTCACATGTCACCCTCGCCGGGTGCTTT
GACGGGAGGATCGCAGGATG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MVSLDQFDLALIAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVSLSTQALGLGVQVFISVKLAHHGDT
IIERFAEEILLLEEVQECYSVAGEADYLIRVVVPDLPTLADFTMKRLMRVPGVESVRSNIVLTALKSEGALPLSHLR

Sequences:

>Translated_157_residues
MVSLDQFDLALIAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVSLSTQALGLGVQVFISVKLAHHGDT
IIERFAEEILLLEEVQECYSVAGEADYLIRVVVPDLPTLADFTMKRLMRVPGVESVRSNIVLTALKSEGALPLSHLR
>Mature_157_residues
MVSLDQFDLALIAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVSLSTQALGLGVQVFISVKLAHHGDT
IIERFAEEILLLEEVQECYSVAGEADYLIRVVVPDLPTLADFTMKRLMRVPGVESVRSNIVLTALKSEGALPLSHLR

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=34.8993288590604, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=35.3333333333333, Blast_Score=97, Evalue=4e-22,
Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=25.8992805755396, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17199; Mature: 17199

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLDQFDLALIAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVSLSTQ
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECHH
ALGLGVQVFISVKLAHHGDTIIERFAEEILLLEEVQECYSVAGEADYLIRVVVPDLPTLA
HHHCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
DFTMKRLMRVPGVESVRSNIVLTALKSEGALPLSHLR
HHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCHHCCC
>Mature Secondary Structure
MVSLDQFDLALIAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVSLSTQ
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECHH
ALGLGVQVFISVKLAHHGDTIIERFAEEILLLEEVQECYSVAGEADYLIRVVVPDLPTLA
HHHCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
DFTMKRLMRVPGVESVRSNIVLTALKSEGALPLSHLR
HHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]