| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yccK [H]
Identifier: 73543064
GI number: 73543064
Start: 3703522
End: 3704544
Strand: Reverse
Name: yccK [H]
Synonym: Reut_A3382
Alternate gene names: 73543064
Gene position: 3704544-3703522 (Counterclockwise)
Preceding gene: 73543065
Following gene: 73543063
Centisome position: 97.32
GC content: 65.3
Gene sequence:
>1023_bases ATGACCGGAAACGCCAACCCCGCTGCGAGCGTTGCAACCCGCCAGCTAGGCAACCATGGCCCCACGGTCTCGGCCATCGG CCTTGGCTGCATGGGCATGAGCGATTTCTACGGCGCGCATGACGATGCCGAGTCGATCCGCACGATCCACCATGCGCTCG ATCGCGGCATTACGCTGCTTGATACCGCGGACATCTATGGGCCGCATACCAATGAAGAACTCGTGGGCCGTGCCATCGCC GGGCGTCGCGAGCAGGTCGTGCTCGCGACCAAATTCGGCATCGTGCGAGATTTGTCGAAACCCGCAGCGCGTGGCGTCAA TGGCCGCCCCGAATATGTGCGCGCGAGCTGCGAGGCAAGTTTGAAGCGCCTCGGCGTAGAGCACATCGATTTGTACTACC AGCACCGCGTCGATCCGGAGGTGCCGATCGAGGAAACCGTGGGCGCGATGGCCGAACTCGTGAAGGCCGGCAAGATCCGC TGGATCGGGCTGTCCGAGGCCGGCGCGCAAACCCTCGAACGCGCGCACAAGGTGCATCCGGTCACGGCCTTGCAGAGCGA GTATTCGTTGTGGACGCGCGATGTGGATACCGACGGCATCCTCGCTACGTGCGAGCGGCTGGGCATTGGCTTCGTGCCCT ATAGCCCGCTGGGCCGCGGCTTCCTGACGGGCGCGATCCGCAGCCCCGAGGACTTCGATGCGGACGATTTCCGTCGCACC AACCCGCGCTTCATGGGCGAAAACTTCGCGCGCAACCTGGCGCTTGTCGACAAGGTGCGCGCACTGGCGGACGCAAAAGG CTGCACGCCGGCGCAGCTCGCGCTTGCCTGGGTACTGGCGCGCGGTCCGCAGATCGTGCCGATTCCCGGTACGCGCCGCA TCGCCAATCTGGACGACAACCTCGGCGCGCTGGACGTGCGGCTCGATGCAAAGGAGCTGGCGGATATCGATGCCATTTTC CCGGCCGGCGCAGCGGCGGGTACGCGCTATGCCGAGCATGTGATGCCGATGCTGGCACGCTGA
Upstream 100 bases:
>100_bases TGATCCTGCGCGTGGTACCTTGAACCAGTCGCACGCCTCGCAGCGCTTCAAGCTGGCGTGCATTCGTCGCCGCGCGCGAC GCCAACCGACAGGAGCAAGC
Downstream 100 bases:
>100_bases TTCGGGTGCAGGGCCTGCCGCATAATGGCGGGTCCTGAACCGACCTGCCGGAGTGTCCGCATGGCCCTGATTCCCCTCGA TGCCGCCAGCACGGCGGCGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTGNANPAASVATRQLGNHGPTVSAIGLGCMGMSDFYGAHDDAESIRTIHHALDRGITLLDTADIYGPHTNEELVGRAIA GRREQVVLATKFGIVRDLSKPAARGVNGRPEYVRASCEASLKRLGVEHIDLYYQHRVDPEVPIEETVGAMAELVKAGKIR WIGLSEAGAQTLERAHKVHPVTALQSEYSLWTRDVDTDGILATCERLGIGFVPYSPLGRGFLTGAIRSPEDFDADDFRRT NPRFMGENFARNLALVDKVRALADAKGCTPAQLALAWVLARGPQIVPIPGTRRIANLDDNLGALDVRLDAKELADIDAIF PAGAAAGTRYAEHVMPMLAR
Sequences:
>Translated_340_residues MTGNANPAASVATRQLGNHGPTVSAIGLGCMGMSDFYGAHDDAESIRTIHHALDRGITLLDTADIYGPHTNEELVGRAIA GRREQVVLATKFGIVRDLSKPAARGVNGRPEYVRASCEASLKRLGVEHIDLYYQHRVDPEVPIEETVGAMAELVKAGKIR WIGLSEAGAQTLERAHKVHPVTALQSEYSLWTRDVDTDGILATCERLGIGFVPYSPLGRGFLTGAIRSPEDFDADDFRRT NPRFMGENFARNLALVDKVRALADAKGCTPAQLALAWVLARGPQIVPIPGTRRIANLDDNLGALDVRLDAKELADIDAIF PAGAAAGTRYAEHVMPMLAR >Mature_339_residues TGNANPAASVATRQLGNHGPTVSAIGLGCMGMSDFYGAHDDAESIRTIHHALDRGITLLDTADIYGPHTNEELVGRAIAG RREQVVLATKFGIVRDLSKPAARGVNGRPEYVRASCEASLKRLGVEHIDLYYQHRVDPEVPIEETVGAMAELVKAGKIRW IGLSEAGAQTLERAHKVHPVTALQSEYSLWTRDVDTDGILATCERLGIGFVPYSPLGRGFLTGAIRSPEDFDADDFRRTN PRFMGENFARNLALVDKVRALADAKGCTPAQLALAWVLARGPQIVPIPGTRRIANLDDNLGALDVRLDAKELADIDAIFP AGAAAGTRYAEHVMPMLAR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=322, Percent_Identity=28.8819875776398, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4504825, Length=322, Percent_Identity=28.8819875776398, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=27.0769230769231, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI27436966, Length=322, Percent_Identity=27.0186335403727, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI27436964, Length=322, Percent_Identity=27.0186335403727, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI27436971, Length=322, Percent_Identity=27.3291925465839, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI223718702, Length=326, Percent_Identity=31.2883435582822, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI41327764, Length=284, Percent_Identity=31.3380281690141, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI41152114, Length=323, Percent_Identity=29.1021671826625, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1789375, Length=339, Percent_Identity=33.0383480825959, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI87081735, Length=337, Percent_Identity=32.3442136498516, Blast_Score=147, Evalue=7e-37, Organism=Escherichia coli, GI1788070, Length=307, Percent_Identity=33.5504885993485, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1788081, Length=303, Percent_Identity=29.042904290429, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1787674, Length=308, Percent_Identity=26.6233766233766, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789199, Length=340, Percent_Identity=29.7058823529412, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI48994888, Length=284, Percent_Identity=27.112676056338, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=344, Percent_Identity=27.6162790697674, Blast_Score=121, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6325384, Length=309, Percent_Identity=29.7734627831715, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323998, Length=321, Percent_Identity=24.9221183800623, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=298, Percent_Identity=22.4832214765101, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322615, Length=261, Percent_Identity=24.5210727969349, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=308, Percent_Identity=23.7012987012987, Blast_Score=79, Evalue=8e-16, Organism=Drosophila melanogaster, GI24657054, Length=342, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24640980, Length=344, Percent_Identity=24.1279069767442, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI45549126, Length=344, Percent_Identity=24.1279069767442, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI45553081, Length=329, Percent_Identity=26.7477203647416, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24663317, Length=352, Percent_Identity=26.1363636363636, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24646155, Length=157, Percent_Identity=35.031847133758, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281366140, Length=291, Percent_Identity=27.4914089347079, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI20129731, Length=346, Percent_Identity=25.7225433526012, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24646159, Length=226, Percent_Identity=30.0884955752212, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 36706; Mature: 36575
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNANPAASVATRQLGNHGPTVSAIGLGCMGMSDFYGAHDDAESIRTIHHALDRGITLL CCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEE DTADIYGPHTNEELVGRAIAGRREQVVLATKFGIVRDLSKPAARGVNGRPEYVRASCEAS ECHHCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LKRLGVEHIDLYYQHRVDPEVPIEETVGAMAELVKAGKIRWIGLSEAGAQTLERAHKVHP HHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCC VTALQSEYSLWTRDVDTDGILATCERLGIGFVPYSPLGRGFLTGAIRSPEDFDADDFRRT HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCC NPRFMGENFARNLALVDKVRALADAKGCTPAQLALAWVLARGPQIVPIPGTRRIANLDDN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCEECCCCCC LGALDVRLDAKELADIDAIFPAGAAAGTRYAEHVMPMLAR CCEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TGNANPAASVATRQLGNHGPTVSAIGLGCMGMSDFYGAHDDAESIRTIHHALDRGITLL CCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEE DTADIYGPHTNEELVGRAIAGRREQVVLATKFGIVRDLSKPAARGVNGRPEYVRASCEAS ECHHCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LKRLGVEHIDLYYQHRVDPEVPIEETVGAMAELVKAGKIRWIGLSEAGAQTLERAHKVHP HHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCC VTALQSEYSLWTRDVDTDGILATCERLGIGFVPYSPLGRGFLTGAIRSPEDFDADDFRRT HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCC NPRFMGENFARNLALVDKVRALADAKGCTPAQLALAWVLARGPQIVPIPGTRRIANLDDN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCEECCCCCC LGALDVRLDAKELADIDAIFPAGAAAGTRYAEHVMPMLAR CCEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]