| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73543063
Identifier: 73543063
GI number: 73543063
Start: 3702505
End: 3703497
Strand: Reverse
Name: 73543063
Synonym: Reut_A3381
Alternate gene names: NA
Gene position: 3703497-3702505 (Counterclockwise)
Preceding gene: 73543064
Following gene: 73543061
Centisome position: 97.29
GC content: 68.98
Gene sequence:
>993_bases ATGGCGGGTCCTGAACCGACCTGCCGGAGTGTCCGCATGGCCCTGATTCCCCTCGATGCCGCCAGCACGGCGGCGCGCCT GCCTTATCCCGAACTCGCCGGGGCGATCGCCGACATGCTGGGCGAGTTGCGCGATGGCACCGCCATGGCGCCGCCGCGTA TCGCGCTGCCGGTCGGCGACGCGCAGGGCGGGGCGGGCACGCTGCTGGTGATGCCGGCGCGCAACCGGCGGCTGGTGATG ACCAAGAACATCACGGTGCATCCCGATAATCCGCGTCGCGGGCTGCCGAATATCCTCGGCGAGGTCGTGGTCGCTGACGC GCATACGGGCGAGCGCCTCGCGATGCTGGATGGTCCCACCGTCACCGGTCGACGTACGGCCGCTGTGTCGTTGCTGGCCG CGCAGCGCTTTGCGGCGCAGCCGGACGGCGAACTGCTGATCATCGGTGCCGGCGTTCAAGCGATGACCCATCTGGAAGCC TTCATCGCTGGATTGCCGGTACGTCGCGTGTGGCTGCATTCGCGCACGCGCGACAAGGCCGAAGCGCTGGCCGCGCACGC TGGCTCGCTCGGCGTGACGGCGGAGGTGACCGATGATGTTGCATCCGTGCTGCCGCGCGTGTCGATGGTGGTGACCGTCA CGTCGAGCGTCAGTCCGGTACTGCCCGACATCGATAGCGGTCTGTGGCAAGAGCACCACTTCATTGCCGCGGTCGGCGCG TTCCGTCCGGACATGTGCGAACTGCCGCCAGCGCTGTGCCATGCGGCGTCGGCCAGCGGGCGCCTGCTCGCCGATACGCT GTTCGGCATCGAGGAAGAGGCTGGTGACTTGTTGCAGGCGGGCATCGACTGGTCGACCGTGCAGCCGTTCGAAACAGCGA TCCTGCAGGCGGATGCCATCCGCGCCCGCCGCAGCAGCCCGCTCGTGTTCAAGAGCGTCGGCTACGCGCTGTGGGACCTG GCGGCCTGCGTGCTGGCCAGCCGCCCGGACTAG
Upstream 100 bases:
>100_bases CGATGCCATTTTCCCGGCCGGCGCAGCGGCGGGTACGCGCTATGCCGAGCATGTGATGCCGATGCTGGCACGCTGATTCG GGTGCAGGGCCTGCCGCATA
Downstream 100 bases:
>100_bases CCTGCGTCCGCCCCGAGCCAGGCACGAAACAGCTCGCGCGCGGGCTCCAGGTACTCGGCAACCGATTCGCTGCAACCGCC GGCATACCAGTGGCAGTAGC
Product: ornithine cyclodeaminase
Products: NA
Alternate protein names: Ornithine Cyclodeaminase/Mu-Crystallin; Ornithine Cyclodeaminase/Mu-Crystallin Family Protein; Ornithine Cyclodeaminase/Mu-Crystallin Family; Ornithine Cyclodeaminase Protein; Alanine Dehydrogenase; Ornithine Cyclodeaminase Mu-Crystallin-Like Protein; Tubz Protein; L-Alanine Dehydrogenase; Mu-Crystallin; Ornithine Cyclodeaminase Mu-Crystallin
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAGPEPTCRSVRMALIPLDAASTAARLPYPELAGAIADMLGELRDGTAMAPPRIALPVGDAQGGAGTLLVMPARNRRLVM TKNITVHPDNPRRGLPNILGEVVVADAHTGERLAMLDGPTVTGRRTAAVSLLAAQRFAAQPDGELLIIGAGVQAMTHLEA FIAGLPVRRVWLHSRTRDKAEALAAHAGSLGVTAEVTDDVASVLPRVSMVVTVTSSVSPVLPDIDSGLWQEHHFIAAVGA FRPDMCELPPALCHAASASGRLLADTLFGIEEEAGDLLQAGIDWSTVQPFETAILQADAIRARRSSPLVFKSVGYALWDL AACVLASRPD
Sequences:
>Translated_330_residues MAGPEPTCRSVRMALIPLDAASTAARLPYPELAGAIADMLGELRDGTAMAPPRIALPVGDAQGGAGTLLVMPARNRRLVM TKNITVHPDNPRRGLPNILGEVVVADAHTGERLAMLDGPTVTGRRTAAVSLLAAQRFAAQPDGELLIIGAGVQAMTHLEA FIAGLPVRRVWLHSRTRDKAEALAAHAGSLGVTAEVTDDVASVLPRVSMVVTVTSSVSPVLPDIDSGLWQEHHFIAAVGA FRPDMCELPPALCHAASASGRLLADTLFGIEEEAGDLLQAGIDWSTVQPFETAILQADAIRARRSSPLVFKSVGYALWDL AACVLASRPD >Mature_329_residues AGPEPTCRSVRMALIPLDAASTAARLPYPELAGAIADMLGELRDGTAMAPPRIALPVGDAQGGAGTLLVMPARNRRLVMT KNITVHPDNPRRGLPNILGEVVVADAHTGERLAMLDGPTVTGRRTAAVSLLAAQRFAAQPDGELLIIGAGVQAMTHLEAF IAGLPVRRVWLHSRTRDKAEALAAHAGSLGVTAEVTDDVASVLPRVSMVVTVTSSVSPVLPDIDSGLWQEHHFIAAVGAF RPDMCELPPALCHAASASGRLLADTLFGIEEEAGDLLQAGIDWSTVQPFETAILQADAIRARRSSPLVFKSVGYALWDLA ACVLASRPD
Specific function: Unknown
COG id: COG2423
COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503065, Length=290, Percent_Identity=32.0689655172414, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI62241008, Length=286, Percent_Identity=32.1678321678322, Blast_Score=95, Evalue=7e-20, Organism=Drosophila melanogaster, GI24642678, Length=165, Percent_Identity=34.5454545454545, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34680; Mature: 34549
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPEPTCRSVRMALIPLDAASTAARLPYPELAGAIADMLGELRDGTAMAPPRIALPVGD CCCCCCCHHCEEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC AQGGAGTLLVMPARNRRLVMTKNITVHPDNPRRGLPNILGEVVVADAHTGERLAMLDGPT CCCCCCEEEEEECCCCEEEEEECEEECCCCCCCCCHHHHHHEEEEECCCCCEEEEECCCC VTGRRTAAVSLLAAQRFAAQPDGELLIIGAGVQAMTHLEAFIAGLPVRRVWLHSRTRDKA CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCHHHH EALAAHAGSLGVTAEVTDDVASVLPRVSMVVTVTSSVSPVLPDIDSGLWQEHHFIAAVGA HHHHHHCCCCCEEEEHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHCHHEEEECC FRPDMCELPPALCHAASASGRLLADTLFGIEEEAGDLLQAGIDWSTVQPFETAILQADAI CCCCHHHCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RARRSSPLVFKSVGYALWDLAACVLASRPD HHHCCCCEEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGPEPTCRSVRMALIPLDAASTAARLPYPELAGAIADMLGELRDGTAMAPPRIALPVGD CCCCCCHHCEEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC AQGGAGTLLVMPARNRRLVMTKNITVHPDNPRRGLPNILGEVVVADAHTGERLAMLDGPT CCCCCCEEEEEECCCCEEEEEECEEECCCCCCCCCHHHHHHEEEEECCCCCEEEEECCCC VTGRRTAAVSLLAAQRFAAQPDGELLIIGAGVQAMTHLEAFIAGLPVRRVWLHSRTRDKA CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCHHHH EALAAHAGSLGVTAEVTDDVASVLPRVSMVVTVTSSVSPVLPDIDSGLWQEHHFIAAVGA HHHHHHCCCCCEEEEHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHCHHEEEECC FRPDMCELPPALCHAASASGRLLADTLFGIEEEAGDLLQAGIDWSTVQPFETAILQADAI CCCCHHHCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RARRSSPLVFKSVGYALWDLAACVLASRPD HHHCCCCEEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA