| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73543020
Identifier: 73543020
GI number: 73543020
Start: 3649495
End: 3651660
Strand: Reverse
Name: 73543020
Synonym: Reut_A3338
Alternate gene names: NA
Gene position: 3651660-3649495 (Counterclockwise)
Preceding gene: 73543021
Following gene: 73543019
Centisome position: 95.93
GC content: 68.37
Gene sequence:
>2166_bases GTGGACCGTGCTGGAGACGGTTGGCGGCAAGTAAGCCCACCGGCGCCAGGCCAGAAGAACGCCACCCTGCGAGGGTGGCG TTTTTTCTTGCCAATCCTAAAGATTGAACTGACCCCTGCCGTTTGTTGTCCCGGATGGGGGATCGTGCCTTTGGCGCATA ATTCCGCATTCGTTTATCCAATCCAGAAGGAGCAGTACGTGTCCGTGCAGGAAGTCAGCTACGACCGCGCCGTCGAACTG GCCGGTGTAGGCCGGTTCGATGAAGCGCTGGAGATTGCCGGCCAGTTGTCGGCAGCCCGGCCCGAAGTGGTCGATTTCAC CACGCTGCAGGCACGGTTGTTCTTCGACAAGGGCGATGCGCAGTCGGCCTTCGCGGTGCTTGATGGGGCACTTTCGCGGC TGGAGACGTTGAACCTTGCGCCGCCTCACCGGTGGGCGTCGCGCGGTGTGCTCGCGCATCGCTATGGCGCCATGCTGATG AGCCTTGGCCGGGATCGCGATGCATTGCCGTGGCTGCACGAGGCCTCGCAGCGCAACGGCCTGCTGTCAGGCGAGTGGCC CGCGCATTTCCACGCGGGGCTGGCTTGCTACCGACTCGGCGACCTGGCCGGCGCAGGCCGCTACTGGCACGACCTGCTGT ATCGCGCGCCTGATCTGGGCGCGGAGGAGATCCTGCCGCTCGTACACGACGCAATCGTCCGTACCGAGGCGGCGGGCCAG CCCGTCGAGCCCATGATGCGCGTCTGCCTGGGGCGCATTGCGCTGGACAACCCGGATCTGCTCGAACTTGAACCCGAAGT CGCCGATGCGCTCGCCGGCGAGCAAGCCGGGCTGGTGCTTGCCGCATCTCCGGACCATCCGCAGGCCCGCCGCCTGCGTG CGCCGCTGCGCTTCGGTGCCGGCGACACGGAAGGGGCGCAGGACGACCTCGCCGTGTACCAGCGCCAGTGCCCGGACCCG CAGACCCAGGTACGCGCAATGGCCTGGCGCCACCAGGCCGCCCGGACGGCCCAGCCCGGCACGCCGGGTACCGATTCCCA ACCCTGGCTGAAGTTCAGCCTGGCGACCGATAGTGACGACGGCGCCGGCTACTACCGTGCCGCCACGGCGCTCGGCGAGT TTATCGACGAGGTGCCGCAGGCCGAAGCCGCGCTGCGGCCCCGGTTGGTGGAAGCCTGCCAGCTTGGCGTCGCGCGCTTC GACCAGTACTTCGCGACCGGCGAGGGCGATGCCAGCGGCCATGGCGGCAATGCCGACCCGCACGTCTATTCGCTGCTGTG CCGCCTTCTGTCGCGCAGCCTTCCGGCCGACGCGGGCAATCTGGAGTCGCGCATCGCGCTGCACCGCAAGGGCATGGCCG CGAGCGAGTTCATCGACCACTGGATCGACCTGCTCGATTGCCATGCTGGCGCCGGCCAGCACCAGAAGGTGGTAGAACTG GCGGGCGAGGTGCTCAATCGCTATCCACTCGAGCGCAATCCGGCCGATGTGACGTGGGCGTTCAGCCGGCTGATCGCCGC GTGGAAGGCCATCGGGGGTGCCGAAGCGGCCGAGGCCGCGGGGGCAGCCATGGCGCATATGGACGCCCGCCTCGACGCAC TGCCCGTGGAGGCCCGCAGCGAGGCCGCGCACCCGATGGCGCATGCGCGGGCGCATTACGCAGCGCTGGTGCAGACGCGC ATGGACGGCATGGATCCGCACGACCGTACCGATGCACTGGCCGAGATCGACACCCAGCAACGTCGCGCGCTGCTCGTGGA GGATGCGTGGCTGTTCAACCGCTTTGGACAGGTTTGGCGTGACCTGGGCGACTATGAGCGCGCCTTGCCGCTGTTCGAGC AGGCCATTGTCATGACCGAAGGCGATGCGTGGGACCAGGCCGCGCCGCGAGTGCAGCGCGCGCTGATCCACAATGCCGCC GCGCGCCACGACGCGGCGCTGGCAGACTTCGCGGCCGCGTTTGCCGTGCGCGACGACTGGGATGCCGAGACCTGGCTGCG TGCGGTGGAATCGGCGGTCGGACTGGCGCAGCGCGAGACCGCACTCGGCTACTTCGACAAGGCGCGCGCCGCGGGCGCCG AGCAGGGCCGTACGCGCGGCCTCCATGCCAAGGTCGAAGCCGCATTGCGGGCTACCCGGCCGAAATGGAAGTTGTGGGGC GTGTAA
Upstream 100 bases:
>100_bases CGACCAACATGCAGGGCGTCACCACCAAGACGCTGGCGTACGACGCCCGTGGCGACCTGAAGGACGGCGGCATCACCGTC TACAAGGTGGTCGGCGGCAA
Downstream 100 bases:
>100_bases AGCACTGATCATGGGGCTGATACGGCCTCATGCACCGCGCGATCCCACAATGAGAAACGCCATCAGCGAAGATGGCGTTT TTTATTGAAAGTTAGCGAAA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MDRAGDGWRQVSPPAPGQKNATLRGWRFFLPILKIELTPAVCCPGWGIVPLAHNSAFVYPIQKEQYVSVQEVSYDRAVEL AGVGRFDEALEIAGQLSAARPEVVDFTTLQARLFFDKGDAQSAFAVLDGALSRLETLNLAPPHRWASRGVLAHRYGAMLM SLGRDRDALPWLHEASQRNGLLSGEWPAHFHAGLACYRLGDLAGAGRYWHDLLYRAPDLGAEEILPLVHDAIVRTEAAGQ PVEPMMRVCLGRIALDNPDLLELEPEVADALAGEQAGLVLAASPDHPQARRLRAPLRFGAGDTEGAQDDLAVYQRQCPDP QTQVRAMAWRHQAARTAQPGTPGTDSQPWLKFSLATDSDDGAGYYRAATALGEFIDEVPQAEAALRPRLVEACQLGVARF DQYFATGEGDASGHGGNADPHVYSLLCRLLSRSLPADAGNLESRIALHRKGMAASEFIDHWIDLLDCHAGAGQHQKVVEL AGEVLNRYPLERNPADVTWAFSRLIAAWKAIGGAEAAEAAGAAMAHMDARLDALPVEARSEAAHPMAHARAHYAALVQTR MDGMDPHDRTDALAEIDTQQRRALLVEDAWLFNRFGQVWRDLGDYERALPLFEQAIVMTEGDAWDQAAPRVQRALIHNAA ARHDAALADFAAAFAVRDDWDAETWLRAVESAVGLAQRETALGYFDKARAAGAEQGRTRGLHAKVEAALRATRPKWKLWG V
Sequences:
>Translated_721_residues MDRAGDGWRQVSPPAPGQKNATLRGWRFFLPILKIELTPAVCCPGWGIVPLAHNSAFVYPIQKEQYVSVQEVSYDRAVEL AGVGRFDEALEIAGQLSAARPEVVDFTTLQARLFFDKGDAQSAFAVLDGALSRLETLNLAPPHRWASRGVLAHRYGAMLM SLGRDRDALPWLHEASQRNGLLSGEWPAHFHAGLACYRLGDLAGAGRYWHDLLYRAPDLGAEEILPLVHDAIVRTEAAGQ PVEPMMRVCLGRIALDNPDLLELEPEVADALAGEQAGLVLAASPDHPQARRLRAPLRFGAGDTEGAQDDLAVYQRQCPDP QTQVRAMAWRHQAARTAQPGTPGTDSQPWLKFSLATDSDDGAGYYRAATALGEFIDEVPQAEAALRPRLVEACQLGVARF DQYFATGEGDASGHGGNADPHVYSLLCRLLSRSLPADAGNLESRIALHRKGMAASEFIDHWIDLLDCHAGAGQHQKVVEL AGEVLNRYPLERNPADVTWAFSRLIAAWKAIGGAEAAEAAGAAMAHMDARLDALPVEARSEAAHPMAHARAHYAALVQTR MDGMDPHDRTDALAEIDTQQRRALLVEDAWLFNRFGQVWRDLGDYERALPLFEQAIVMTEGDAWDQAAPRVQRALIHNAA ARHDAALADFAAAFAVRDDWDAETWLRAVESAVGLAQRETALGYFDKARAAGAEQGRTRGLHAKVEAALRATRPKWKLWG V >Mature_721_residues MDRAGDGWRQVSPPAPGQKNATLRGWRFFLPILKIELTPAVCCPGWGIVPLAHNSAFVYPIQKEQYVSVQEVSYDRAVEL AGVGRFDEALEIAGQLSAARPEVVDFTTLQARLFFDKGDAQSAFAVLDGALSRLETLNLAPPHRWASRGVLAHRYGAMLM SLGRDRDALPWLHEASQRNGLLSGEWPAHFHAGLACYRLGDLAGAGRYWHDLLYRAPDLGAEEILPLVHDAIVRTEAAGQ PVEPMMRVCLGRIALDNPDLLELEPEVADALAGEQAGLVLAASPDHPQARRLRAPLRFGAGDTEGAQDDLAVYQRQCPDP QTQVRAMAWRHQAARTAQPGTPGTDSQPWLKFSLATDSDDGAGYYRAATALGEFIDEVPQAEAALRPRLVEACQLGVARF DQYFATGEGDASGHGGNADPHVYSLLCRLLSRSLPADAGNLESRIALHRKGMAASEFIDHWIDLLDCHAGAGQHQKVVEL AGEVLNRYPLERNPADVTWAFSRLIAAWKAIGGAEAAEAAGAAMAHMDARLDALPVEARSEAAHPMAHARAHYAALVQTR MDGMDPHDRTDALAEIDTQQRRALLVEDAWLFNRFGQVWRDLGDYERALPLFEQAIVMTEGDAWDQAAPRVQRALIHNAA ARHDAALADFAAAFAVRDDWDAETWLRAVESAVGLAQRETALGYFDKARAAGAEQGRTRGLHAKVEAALRATRPKWKLWG V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78753; Mature: 78753
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00699 NITROGENASE_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRAGDGWRQVSPPAPGQKNATLRGWRFFLPILKIELTPAVCCPGWGIVPLAHNSAFVYP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEECCCCCEEEEECCCEEEEE IQKEQYVSVQEVSYDRAVELAGVGRFDEALEIAGQLSAARPEVVDFTTLQARLFFDKGDA ECCCHHCHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC QSAFAVLDGALSRLETLNLAPPHRWASRGVLAHRYGAMLMSLGRDRDALPWLHEASQRNG HHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC LLSGEWPAHFHAGLACYRLGDLAGAGRYWHDLLYRAPDLGAEEILPLVHDAIVRTEAAGQ CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC PVEPMMRVCLGRIALDNPDLLELEPEVADALAGEQAGLVLAASPDHPQARRLRAPLRFGA CHHHHHHHHHHHHCCCCCCCEEECHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCHHCCC GDTEGAQDDLAVYQRQCPDPQTQVRAMAWRHQAARTAQPGTPGTDSQPWLKFSLATDSDD CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC GAGYYRAATALGEFIDEVPQAEAALRPRLVEACQLGVARFDQYFATGEGDASGHGGNADP CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH HVYSLLCRLLSRSLPADAGNLESRIALHRKGMAASEFIDHWIDLLDCHAGAGQHQKVVEL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH AGEVLNRYPLERNPADVTWAFSRLIAAWKAIGGAEAAEAAGAAMAHMDARLDALPVEARS HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH EAAHPMAHARAHYAALVQTRMDGMDPHDRTDALAEIDTQQRRALLVEDAWLFNRFGQVWR HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH DLGDYERALPLFEQAIVMTEGDAWDQAAPRVQRALIHNAAARHDAALADFAAAFAVRDDW HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DAETWLRAVESAVGLAQRETALGYFDKARAAGAEQGRTRGLHAKVEAALRATRPKWKLWG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCCEEECC V C >Mature Secondary Structure MDRAGDGWRQVSPPAPGQKNATLRGWRFFLPILKIELTPAVCCPGWGIVPLAHNSAFVYP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEECCCCCEEEEECCCEEEEE IQKEQYVSVQEVSYDRAVELAGVGRFDEALEIAGQLSAARPEVVDFTTLQARLFFDKGDA ECCCHHCHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC QSAFAVLDGALSRLETLNLAPPHRWASRGVLAHRYGAMLMSLGRDRDALPWLHEASQRNG HHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC LLSGEWPAHFHAGLACYRLGDLAGAGRYWHDLLYRAPDLGAEEILPLVHDAIVRTEAAGQ CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC PVEPMMRVCLGRIALDNPDLLELEPEVADALAGEQAGLVLAASPDHPQARRLRAPLRFGA CHHHHHHHHHHHHCCCCCCCEEECHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCHHCCC GDTEGAQDDLAVYQRQCPDPQTQVRAMAWRHQAARTAQPGTPGTDSQPWLKFSLATDSDD CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC GAGYYRAATALGEFIDEVPQAEAALRPRLVEACQLGVARFDQYFATGEGDASGHGGNADP CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH HVYSLLCRLLSRSLPADAGNLESRIALHRKGMAASEFIDHWIDLLDCHAGAGQHQKVVEL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH AGEVLNRYPLERNPADVTWAFSRLIAAWKAIGGAEAAEAAGAAMAHMDARLDALPVEARS HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH EAAHPMAHARAHYAALVQTRMDGMDPHDRTDALAEIDTQQRRALLVEDAWLFNRFGQVWR HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH DLGDYERALPLFEQAIVMTEGDAWDQAAPRVQRALIHNAAARHDAALADFAAAFAVRDDW HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DAETWLRAVESAVGLAQRETALGYFDKARAAGAEQGRTRGLHAKVEAALRATRPKWKLWG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCCEEECC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA