| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is ttuD [H]
Identifier: 73542977
GI number: 73542977
Start: 3602983
End: 3604290
Strand: Direct
Name: ttuD [H]
Synonym: Reut_A3294
Alternate gene names: 73542977
Gene position: 3602983-3604290 (Clockwise)
Preceding gene: 73542976
Following gene: 73542978
Centisome position: 94.65
GC content: 69.72
Gene sequence:
>1308_bases ATGCTCGACACCGAAACCAGCGCCGCCCTGCTGACCCCGCAGCGTCCCAGCCTCCAGCCGCGCGCCCTGTTGCGCGACCT GTTCGATACCGCCGTGGCATCGGTCAGCGCCAGCCACTGCCTGCCGCCGCACCTGCCGCATCCGCCGAAGGGCCGCACCG TGGTAATCGGCGCCGGCAAGGCCGCCGCCGCGATGGCGCAGGCTGTCGAAGCGCACTGGCAAGGCGAGCTGAGCGGACTG GTGGTGACGCGCTATGGCCACGGTGCCGACTGCAAGCGCATCGAAGTCGTCGAAGCCGCGCATCCGGTGCCCGATGAAGC CGGCGCCCGCGCCGCGCAGCGCATGGTCGAACTCGTGCAGGGCCTGACCGCCGACGATCTCGTGCTGTGCCTGATTTCCG GTGGCGGCTCCGCGTTGCTCGCCGCGCCCGCGCCTGGCATCTCGCTCGCCGACAAGCAGGCCGTCAACAAGGCCCTGCTG CGCAGCGGCGCGAGCATCGGCGAGATGAACTGCGTGCGCAAGCACCTGTCGGCGCTCAAGGGCGGGCGCCTCGCGTTGCA CTGCGCACCGGCGCGTGTCGAGACGCTGCTGATTTCCGATATTCCCGGCGATGACCCCACGCTGATCGCGAGCGGCCCGA CGCTGCCCGACGCAACGACGTGCGCCGACGCGCTCGCGGTCATCGCCAAGTACGGCATCGACGTGCCGGCCAATGTGCGT GCCCATCTGGAAAGCGGCGCAGGCGAAACGCCGAAGCCCGGCGATGCACGCTTTGCGGGCCACCGCAGCGTGACGCTGGC CACCGCGCAGCAATCGCTCGAAGCGGCCGCGGCACGTGCGCGCGAACTCGGCTTCGAGGCGCACATCCTGTCCGATTGCA TCGAAGGCGAAGCGCGCGACGTGGCGCTCGTGCACGCGGCCATCGCACGCCAGATCGCACAGCACGGCCAACCCTTCAGC AAGCCATGCGTGCTGTTGTCCGGCGGCGAGACCACGGTGACCGTGCGCGGCAAGGGCCGTGGCGGGCGCAATGCGGAATT CCTGCTGTCGCTGGCCGTTGCGCTCGATGGCCTGCCCGGCGTGCATGCGATTGCTTGCGACACCGACGGCATCGACGGCT CCGAAGACAACGCCGGCGCGCTGCTCGCGCCGGATACGCTGACCCGCGCCGCCTCACGCGGCTTGTCGGCCCGCGCGCAT CTGGAAAACAACGACGGCTATGGCTTCTTTGCCGGCGTGGACGACCTGATCGTGACCGGCCCGACCCGCACCAACGTGAA CGATTTCCGCGCGATCCTTATCGTTTGA
Upstream 100 bases:
>100_bases AAGCACATCGCTGCACACGCAAGATCTGCAGTACCTGTAGTTGCAGCAAACGCCGTCCCCTTCGCGGGGACGGCCTCAGT TTCAGTTCCCAGGATTCCCC
Downstream 100 bases:
>100_bases GTATCGCGTCCGAACTGAACCGCATTACCGGCGCGCCACCACGGCGCGCCGTTCCGAGAATGGAAGAGGAGACATCATGA GACGCCAGCGCAAAGCCAAG
Product: glycerate 2-kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MLDTETSAALLTPQRPSLQPRALLRDLFDTAVASVSASHCLPPHLPHPPKGRTVVIGAGKAAAAMAQAVEAHWQGELSGL VVTRYGHGADCKRIEVVEAAHPVPDEAGARAAQRMVELVQGLTADDLVLCLISGGGSALLAAPAPGISLADKQAVNKALL RSGASIGEMNCVRKHLSALKGGRLALHCAPARVETLLISDIPGDDPTLIASGPTLPDATTCADALAVIAKYGIDVPANVR AHLESGAGETPKPGDARFAGHRSVTLATAQQSLEAAAARARELGFEAHILSDCIEGEARDVALVHAAIARQIAQHGQPFS KPCVLLSGGETTVTVRGKGRGGRNAEFLLSLAVALDGLPGVHAIACDTDGIDGSEDNAGALLAPDTLTRAASRGLSARAH LENNDGYGFFAGVDDLIVTGPTRTNVNDFRAILIV
Sequences:
>Translated_435_residues MLDTETSAALLTPQRPSLQPRALLRDLFDTAVASVSASHCLPPHLPHPPKGRTVVIGAGKAAAAMAQAVEAHWQGELSGL VVTRYGHGADCKRIEVVEAAHPVPDEAGARAAQRMVELVQGLTADDLVLCLISGGGSALLAAPAPGISLADKQAVNKALL RSGASIGEMNCVRKHLSALKGGRLALHCAPARVETLLISDIPGDDPTLIASGPTLPDATTCADALAVIAKYGIDVPANVR AHLESGAGETPKPGDARFAGHRSVTLATAQQSLEAAAARARELGFEAHILSDCIEGEARDVALVHAAIARQIAQHGQPFS KPCVLLSGGETTVTVRGKGRGGRNAEFLLSLAVALDGLPGVHAIACDTDGIDGSEDNAGALLAPDTLTRAASRGLSARAH LENNDGYGFFAGVDDLIVTGPTRTNVNDFRAILIV >Mature_435_residues MLDTETSAALLTPQRPSLQPRALLRDLFDTAVASVSASHCLPPHLPHPPKGRTVVIGAGKAAAAMAQAVEAHWQGELSGL VVTRYGHGADCKRIEVVEAAHPVPDEAGARAAQRMVELVQGLTADDLVLCLISGGGSALLAAPAPGISLADKQAVNKALL RSGASIGEMNCVRKHLSALKGGRLALHCAPARVETLLISDIPGDDPTLIASGPTLPDATTCADALAVIAKYGIDVPANVR AHLESGAGETPKPGDARFAGHRSVTLATAQQSLEAAAARARELGFEAHILSDCIEGEARDVALVHAAIARQIAQHGQPFS KPCVLLSGGETTVTVRGKGRGGRNAEFLLSLAVALDGLPGVHAIACDTDGIDGSEDNAGALLAPDTLTRAASRGLSARAH LENNDGYGFFAGVDDLIVTGPTRTNVNDFRAILIV
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=485, Percent_Identity=32.9896907216495, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI193205461, Length=412, Percent_Identity=29.8543689320388, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI19920578, Length=387, Percent_Identity=29.9741602067183, Blast_Score=131, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 44730; Mature: 44730
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTETSAALLTPQRPSLQPRALLRDLFDTAVASVSASHCLPPHLPHPPKGRTVVIGAGK CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCH AAAAMAQAVEAHWQGELSGLVVTRYGHGADCKRIEVVEAAHPVPDEAGARAAQRMVELVQ HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHH GLTADDLVLCLISGGGSALLAAPAPGISLADKQAVNKALLRSGASIGEMNCVRKHLSALK CCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GGRLALHCAPARVETLLISDIPGDDPTLIASGPTLPDATTCADALAVIAKYGIDVPANVR CCCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHH AHLESGAGETPKPGDARFAGHRSVTLATAQQSLEAAAARARELGFEAHILSDCIEGEARD HHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH VALVHAAIARQIAQHGQPFSKPCVLLSGGETTVTVRGKGRGGRNAEFLLSLAVALDGLPG HHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC VHAIACDTDGIDGSEDNAGALLAPDTLTRAASRGLSARAHLENNDGYGFFAGVDDLIVTG CEEEEECCCCCCCCCCCCCEEECCHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEC PTRTNVNDFRAILIV CCCCCCCCEEEEEEC >Mature Secondary Structure MLDTETSAALLTPQRPSLQPRALLRDLFDTAVASVSASHCLPPHLPHPPKGRTVVIGAGK CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCH AAAAMAQAVEAHWQGELSGLVVTRYGHGADCKRIEVVEAAHPVPDEAGARAAQRMVELVQ HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHH GLTADDLVLCLISGGGSALLAAPAPGISLADKQAVNKALLRSGASIGEMNCVRKHLSALK CCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GGRLALHCAPARVETLLISDIPGDDPTLIASGPTLPDATTCADALAVIAKYGIDVPANVR CCCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHH AHLESGAGETPKPGDARFAGHRSVTLATAQQSLEAAAARARELGFEAHILSDCIEGEARD HHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH VALVHAAIARQIAQHGQPFSKPCVLLSGGETTVTVRGKGRGGRNAEFLLSLAVALDGLPG HHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC VHAIACDTDGIDGSEDNAGALLAPDTLTRAASRGLSARAHLENNDGYGFFAGVDDLIVTG CEEEEECCCCCCCCCCCCCEEECCHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEC PTRTNVNDFRAILIV CCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]