Click here to switch to the map view.

The map label for this gene is yraP [C]

Identifier: 73542946

GI number: 73542946

Start: 3574061

End: 3574879

Strand: Reverse

Name: yraP [C]

Synonym: Reut_A3263

Alternate gene names: 73542946

Gene position: 3574879-3574061 (Counterclockwise)

Preceding gene: 73542947

Following gene: 73542945

Centisome position: 93.91

GC content: 67.28

Gene sequence:

>819_bases
ATGAAGAATCTGCCTTTCCAGGCCTCCCGCCTGACCCGCATCGCAATGACAGCCGCCGTGCTAGCGGTTGGCACTACCCA
GCTCGCCGGCTGCTTCCCGGTGATGGCCGGCGCCGTGGCCAGCGGCGTCGCGGTGGCCACCGACCGTCGCCCGACCGCCA
CGCAGACTGTGGACCGCGGGCTGCAGATGGAGGCCGACAGCACCCTCAGCTCGCGCTACAACGGCCAGGCGCGCGTGAGC
GTCACCGTATTCAACCGCAAGGTCCTGCTGACTGGCGAAGCCGCGAACGACAACGTGAAGCAGCAGGTCGACCAGTACGT
GCGCGGCCTGCAGAATGCACGCGTGGTCGTCAACGAACTGGAAATCACGTCTTCGCCGTCGTTCATGACGCAGACCCAGG
ACACCTATCTGACCAGCGCAGTCAAGACCCAGCTCATGACCGCCGAGGGCGTGCCGTCGAACTCCATCAAGGTCACGACC
GACAAGGGTGTGGTCTACCTGCTGGGTATCGTCACCACGACCGAGGGCGACCGCGCCACGGAAGTCGCCCGCAATACGAG
CGGCGTCACCAAGGTGGTCAAGGCTTTTGACTACGTCAGCGAAGCGGAGCGCGCGCGCCTGGATCAAGCCTCCACCTCGC
AGAACCCGCCGCCCGAGGGTACCGTCGGTACGCCCGCACCGGTGCAATCGGTGCCGGGCGTGGGTGGTCCGGTCACTGCG
CCCGCCGGTTCATCCGCCGCCAACGGCGCTGTCGCGAGTCCCGTCGCCTCGCCCGTAAGCTCCCCTGTGGCGCTGCCGCC
CGGACGTAGCCTTCCCTGA

Upstream 100 bases:

>100_bases
GGAAGTTCACCTGCTCACCCTGCATTGCCTGTGCGATGGCATCGACGAGGCATTGCTCGGCGAAGCCTGATCCACTTACC
CCAGCTACAGCAAGGACAGC

Downstream 100 bases:

>100_bases
TCGGCATGGGGACCAGAGGTCAGCGCGGACTGCCTGACCTCATGAGGATTCCGCGCCACCTGCCCGCGCGCGATGTGATA
CGGTTGCCACGCGCCGCCCG

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKNLPFQASRLTRIAMTAAVLAVGTTQLAGCFPVMAGAVASGVAVATDRRPTATQTVDRGLQMEADSTLSSRYNGQARVS
VTVFNRKVLLTGEAANDNVKQQVDQYVRGLQNARVVVNELEITSSPSFMTQTQDTYLTSAVKTQLMTAEGVPSNSIKVTT
DKGVVYLLGIVTTTEGDRATEVARNTSGVTKVVKAFDYVSEAERARLDQASTSQNPPPEGTVGTPAPVQSVPGVGGPVTA
PAGSSAANGAVASPVASPVSSPVALPPGRSLP

Sequences:

>Translated_272_residues
MKNLPFQASRLTRIAMTAAVLAVGTTQLAGCFPVMAGAVASGVAVATDRRPTATQTVDRGLQMEADSTLSSRYNGQARVS
VTVFNRKVLLTGEAANDNVKQQVDQYVRGLQNARVVVNELEITSSPSFMTQTQDTYLTSAVKTQLMTAEGVPSNSIKVTT
DKGVVYLLGIVTTTEGDRATEVARNTSGVTKVVKAFDYVSEAERARLDQASTSQNPPPEGTVGTPAPVQSVPGVGGPVTA
PAGSSAANGAVASPVASPVSSPVALPPGRSLP
>Mature_272_residues
MKNLPFQASRLTRIAMTAAVLAVGTTQLAGCFPVMAGAVASGVAVATDRRPTATQTVDRGLQMEADSTLSSRYNGQARVS
VTVFNRKVLLTGEAANDNVKQQVDQYVRGLQNARVVVNELEITSSPSFMTQTQDTYLTSAVKTQLMTAEGVPSNSIKVTT
DKGVVYLLGIVTTTEGDRATEVARNTSGVTKVVKAFDYVSEAERARLDQASTSQNPPPEGTVGTPAPVQSVPGVGGPVTA
PAGSSAANGAVASPVASPVSSPVALPPGRSLP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=156, Percent_Identity=35.2564102564103, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 28075; Mature: 28075

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLPFQASRLTRIAMTAAVLAVGTTQLAGCFPVMAGAVASGVAVATDRRPTATQTVDRG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCC
LQMEADSTLSSRYNGQARVSVTVFNRKVLLTGEAANDNVKQQVDQYVRGLQNARVVVNEL
CEECCCHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEE
EITSSPSFMTQTQDTYLTSAVKTQLMTAEGVPSNSIKVTTDKGVVYLLGIVTTTEGDRAT
EECCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEEEECCCCHHH
EVARNTSGVTKVVKAFDYVSEAERARLDQASTSQNPPPEGTVGTPAPVQSVPGVGGPVTA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PAGSSAANGAVASPVASPVSSPVALPPGRSLP
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNLPFQASRLTRIAMTAAVLAVGTTQLAGCFPVMAGAVASGVAVATDRRPTATQTVDRG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCC
LQMEADSTLSSRYNGQARVSVTVFNRKVLLTGEAANDNVKQQVDQYVRGLQNARVVVNEL
CEECCCHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEE
EITSSPSFMTQTQDTYLTSAVKTQLMTAEGVPSNSIKVTTDKGVVYLLGIVTTTEGDRAT
EECCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEEEECCCCHHH
EVARNTSGVTKVVKAFDYVSEAERARLDQASTSQNPPPEGTVGTPAPVQSVPGVGGPVTA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PAGSSAANGAVASPVASPVSSPVALPPGRSLP
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]