| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is paaK [H]
Identifier: 73542701
GI number: 73542701
Start: 3319895
End: 3321199
Strand: Direct
Name: paaK [H]
Synonym: Reut_A3017
Alternate gene names: 73542701
Gene position: 3319895-3321199 (Clockwise)
Preceding gene: 73542700
Following gene: 73542703
Centisome position: 87.22
GC content: 66.74
Gene sequence:
>1305_bases ATGAGCACGCGCCTGACCGATCTGCCGCTCGAGCCTATCGAGACCGCCAGCCGCGACGAATTGCGGGCACTCCAGCTCGA GCGCCTGAAATGGTCGCTGCGGCATGCCTACGATAACTCGCCGGTCTACCGCCGCAAATTCGACGAGGCCGGCGTGCATC CCGATCAGGTCCAGACGCTCGCAGACCTCGCGCGCTTCCCGTTCACCACCAAACAGGACCTGCGCGACAACTATCCGTTC GGCATGTTCGCGGTGCCGCAGGACCGCGTGGCGCGCGTGCATGCATCGTCGGGCACTACGGGCAAGCCGACCGTGGTCGG TTACACGCTCAAGGACATCGACACGTGGGCCACGGTGATGGCGCGCTCGATCCGGGCTGCCGGAGCGAGGCGTTGCGACA AGGTGCACGTCAGCTATGGCTATGGCCTGTTCACGGGCGGCCTCGGCGCGCACTACGGCGTGGAAAAGGCCGGCCTGACG GCGATCCCGTTCGGCGGCGGGCAGACCGAACGCCAGGTGCAGCTGATCATGGATTTCAAGCCCGAGATCATCATGGTCAC GCCGAGCTATATGCTCGCCATCGCCGACGAATTCGAGCGCCAGGGCATCGATCCCGCCACGACGTCGCTGCGCGTCGGCA TCTTCGGGGCCGAGCCGTGGACGCCGGAAATGCGCCTCGCGATCGAGAAGCGCATGAATATCTCGGCCGTCGACATCTAT GGCCTGTCCGAAGTGATGGGCCCGGGCGTGGCCAATGAATGCGCCGAGACCAAGGACGGCCCGACCATCTGGGAAGATCA CTTCTACCCCGAGATCATCGACCCGGATACCGGTGAGGTACTTCCCGACGGCGAGTTCGGCGAACTCGTGTTCACGTCAC TGACCAAGGAAGCGATGCCGGTGGTCCGCTACCGCACGCGCGACCTGACGCGCCTGCTGCCGGGCACCGCGCGCGCGGCG TTCCGGCGCATGGAGAAGGTCACCGGCCGGACCGACGACATGATGATCGTGCGCGGCGTGAACGTGTTCCCGTCGCAGAT CGAGGAGCTGATCCTGAAGCGCCCGGAACTGGCGCCGCACTACCAGTGCGTGCTGACGCGCGAAGGGCCGATGGACCTGC TGACAGTGCGCGTGGAATGCGCCCACGGCGGCGAACCGGCGACGGCGCAAGCCGCTCGCGAGGCACTGGCCCACGACATC AAGGCCTATATCGGCGTGAGCGCCGGCATCGAGGTGCTGCCGACCGGCGGCATCGAGCGCTCGGTCGGCAAGGCGCGGCG CATCGTCGACCAGCGCCCACGCTGA
Upstream 100 bases:
>100_bases GACAGCAGCAGCACCTGAAGTTCGCCAGGCCCGTGGCCTGACCCCGCACAAGACGATTTCACGATTCCATCGACAAGAAC GCCCACGTGCAGGAGACGAT
Downstream 100 bases:
>100_bases TAGTTACCGCGCGGCGCGTCAGCTGCGCGGCATCAGCACCCACATCCGGCCGCCCTGCTTCATGCGGCCGGCCGTCTCGC CCGCGGCATCGCCCGCGCCC
Product: phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSTRLTDLPLEPIETASRDELRALQLERLKWSLRHAYDNSPVYRRKFDEAGVHPDQVQTLADLARFPFTTKQDLRDNYPF GMFAVPQDRVARVHASSGTTGKPTVVGYTLKDIDTWATVMARSIRAAGARRCDKVHVSYGYGLFTGGLGAHYGVEKAGLT AIPFGGGQTERQVQLIMDFKPEIIMVTPSYMLAIADEFERQGIDPATTSLRVGIFGAEPWTPEMRLAIEKRMNISAVDIY GLSEVMGPGVANECAETKDGPTIWEDHFYPEIIDPDTGEVLPDGEFGELVFTSLTKEAMPVVRYRTRDLTRLLPGTARAA FRRMEKVTGRTDDMMIVRGVNVFPSQIEELILKRPELAPHYQCVLTREGPMDLLTVRVECAHGGEPATAQAAREALAHDI KAYIGVSAGIEVLPTGGIERSVGKARRIVDQRPR
Sequences:
>Translated_434_residues MSTRLTDLPLEPIETASRDELRALQLERLKWSLRHAYDNSPVYRRKFDEAGVHPDQVQTLADLARFPFTTKQDLRDNYPF GMFAVPQDRVARVHASSGTTGKPTVVGYTLKDIDTWATVMARSIRAAGARRCDKVHVSYGYGLFTGGLGAHYGVEKAGLT AIPFGGGQTERQVQLIMDFKPEIIMVTPSYMLAIADEFERQGIDPATTSLRVGIFGAEPWTPEMRLAIEKRMNISAVDIY GLSEVMGPGVANECAETKDGPTIWEDHFYPEIIDPDTGEVLPDGEFGELVFTSLTKEAMPVVRYRTRDLTRLLPGTARAA FRRMEKVTGRTDDMMIVRGVNVFPSQIEELILKRPELAPHYQCVLTREGPMDLLTVRVECAHGGEPATAQAAREALAHDI KAYIGVSAGIEVLPTGGIERSVGKARRIVDQRPR >Mature_433_residues STRLTDLPLEPIETASRDELRALQLERLKWSLRHAYDNSPVYRRKFDEAGVHPDQVQTLADLARFPFTTKQDLRDNYPFG MFAVPQDRVARVHASSGTTGKPTVVGYTLKDIDTWATVMARSIRAAGARRCDKVHVSYGYGLFTGGLGAHYGVEKAGLTA IPFGGGQTERQVQLIMDFKPEIIMVTPSYMLAIADEFERQGIDPATTSLRVGIFGAEPWTPEMRLAIEKRMNISAVDIYG LSEVMGPGVANECAETKDGPTIWEDHFYPEIIDPDTGEVLPDGEFGELVFTSLTKEAMPVVRYRTRDLTRLLPGTARAAF RRMEKVTGRTDDMMIVRGVNVFPSQIEELILKRPELAPHYQCVLTREGPMDLLTVRVECAHGGEPATAQAAREALAHDIK AYIGVSAGIEVLPTGGIERSVGKARRIVDQRPR
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=432, Percent_Identity=63.1944444444444, Blast_Score=567, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 48147; Mature: 48015
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRLTDLPLEPIETASRDELRALQLERLKWSLRHAYDNSPVYRRKFDEAGVHPDQVQTL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHH ADLARFPFTTKQDLRDNYPFGMFAVPQDRVARVHASSGTTGKPTVVGYTLKDIDTWATVM HHHHHCCCCCHHHHHCCCCCCEEECCHHHHHEEECCCCCCCCCEEEEEEHHHHHHHHHHH ARSIRAAGARRCDKVHVSYGYGLFTGGLGAHYGVEKAGLTAIPFGGGQTERQVQLIMDFK HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECC PEIIMVTPSYMLAIADEFERQGIDPATTSLRVGIFGAEPWTPEMRLAIEKRMNISAVDIY CCEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEC GLSEVMGPGVANECAETKDGPTIWEDHFYPEIIDPDTGEVLPDGEFGELVFTSLTKEAMP CHHHHHCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VVRYRTRDLTRLLPGTARAAFRRMEKVTGRTDDMMIVRGVNVFPSQIEELILKRPELAPH HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC YQCVLTREGPMDLLTVRVECAHGGEPATAQAAREALAHDIKAYIGVSAGIEVLPTGGIER EEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH SVGKARRIVDQRPR HHHHHHHHHHCCCC >Mature Secondary Structure STRLTDLPLEPIETASRDELRALQLERLKWSLRHAYDNSPVYRRKFDEAGVHPDQVQTL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHH ADLARFPFTTKQDLRDNYPFGMFAVPQDRVARVHASSGTTGKPTVVGYTLKDIDTWATVM HHHHHCCCCCHHHHHCCCCCCEEECCHHHHHEEECCCCCCCCCEEEEEEHHHHHHHHHHH ARSIRAAGARRCDKVHVSYGYGLFTGGLGAHYGVEKAGLTAIPFGGGQTERQVQLIMDFK HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECC PEIIMVTPSYMLAIADEFERQGIDPATTSLRVGIFGAEPWTPEMRLAIEKRMNISAVDIY CCEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEC GLSEVMGPGVANECAETKDGPTIWEDHFYPEIIDPDTGEVLPDGEFGELVFTSLTKEAMP CHHHHHCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VVRYRTRDLTRLLPGTARAAFRRMEKVTGRTDDMMIVRGVNVFPSQIEELILKRPELAPH HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC YQCVLTREGPMDLLTVRVECAHGGEPATAQAAREALAHDIKAYIGVSAGIEVLPTGGIER EEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH SVGKARRIVDQRPR HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]