| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is aroE
Identifier: 73542540
GI number: 73542540
Start: 3128339
End: 3129223
Strand: Reverse
Name: aroE
Synonym: Reut_A2855
Alternate gene names: 73542540
Gene position: 3129223-3128339 (Counterclockwise)
Preceding gene: 73542541
Following gene: 73542539
Centisome position: 82.21
GC content: 67.8
Gene sequence:
>885_bases ATGACATCCACCGAATCCTCCCAGCCGGCTGACCGCTACGTCGTGGTCGGCAACCCCGTCGCGCACAGCCGTTCGCCGTT CATCCACGCCGCGTTTGCCAGGCAGACCGGCGAAGCCGTCGAATACGGTCGCCTGGAAGCGCCGCTCGACGCGTTCGCAG ACACCATGCGCGCGTTCCTTGCTGAAGGCGGCTATGGCTTCAACGTGACCGTGCCGTTCAAGCTGCAGGCCTATGATCTG GCCGACCGCCTGACGCCGCGCGCGGAAGCCGCCGGCGCGGTCAACACGATGTGGATCGAGGATGGCCTGATCCACGGCGA CAATACCGACGGCATCGGCCTCGTGCGCGATATCCAGGACAATCTCGACACCCTGCTCGAAGACAAGCGTGTGCTGCTGC TCGGCGCGGGCGGCGCGGCCATGGGCGCGATGCTGCCGCTGATTGAATGCCGGCCCTCGCGCATTGTGGTGGCCAACCGC ACGGCCTCGCGCGCGAGCGACATGCTCGAAGAGTTCGTGGAAGCGGCCGATTCGTTCGGCGTGGAGTTGTGGGGCGGTGG CCTCGATGCGCTTGAGCAGCTGTCCGAAGACGATGTCTGCGACGTCGTCATCAACGCATCGTCGAGCAGCCTGCATGGCG AAGTGCCGCCGGTGCCGGCGTTCCTGCTCGGCGACGGCGTGCTCGCCTACGACATGATGTACGGCGCCGAGCCGACCGTA TTCCTGCAGCACGCTGCGCAATGCGGCGCGCGCACGGCCGACGGTCTCGGCATGCTGGTCGAACAGGCGGCTGAAGCGTT CTACATCTGGCGCGGCGTGCGTCCGCGCACCGCGCCCGTGCTGGCCGACCTGCGCGCCGCGCTGCAGGCCGAGCGCAAGG GCTGA
Upstream 100 bases:
>100_bases CGTTCACGGCCGAGATGGCTGCGCGCCAGGACATTCTCGAAGTGATTTCCACATTCAAGTTTTCGCGCAGCGGGCTGGAA ACCCGCTTGCAGGCACGCTG
Downstream 100 bases:
>100_bases TCGCCGCCAGTGCCCGTGGCCACCCGACAGCGCTCCGCGCGCGCCGCCGGCACGGCATTCTCCCCGCTGCGCTGGATCGG TTTCCTGCTCGGCTGCATCG
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTSTESSQPADRYVVVGNPVAHSRSPFIHAAFARQTGEAVEYGRLEAPLDAFADTMRAFLAEGGYGFNVTVPFKLQAYDL ADRLTPRAEAAGAVNTMWIEDGLIHGDNTDGIGLVRDIQDNLDTLLEDKRVLLLGAGGAAMGAMLPLIECRPSRIVVANR TASRASDMLEEFVEAADSFGVELWGGGLDALEQLSEDDVCDVVINASSSSLHGEVPPVPAFLLGDGVLAYDMMYGAEPTV FLQHAAQCGARTADGLGMLVEQAAEAFYIWRGVRPRTAPVLADLRAALQAERKG
Sequences:
>Translated_294_residues MTSTESSQPADRYVVVGNPVAHSRSPFIHAAFARQTGEAVEYGRLEAPLDAFADTMRAFLAEGGYGFNVTVPFKLQAYDL ADRLTPRAEAAGAVNTMWIEDGLIHGDNTDGIGLVRDIQDNLDTLLEDKRVLLLGAGGAAMGAMLPLIECRPSRIVVANR TASRASDMLEEFVEAADSFGVELWGGGLDALEQLSEDDVCDVVINASSSSLHGEVPPVPAFLLGDGVLAYDMMYGAEPTV FLQHAAQCGARTADGLGMLVEQAAEAFYIWRGVRPRTAPVLADLRAALQAERKG >Mature_293_residues TSTESSQPADRYVVVGNPVAHSRSPFIHAAFARQTGEAVEYGRLEAPLDAFADTMRAFLAEGGYGFNVTVPFKLQAYDLA DRLTPRAEAAGAVNTMWIEDGLIHGDNTDGIGLVRDIQDNLDTLLEDKRVLLLGAGGAAMGAMLPLIECRPSRIVVANRT ASRASDMLEEFVEAADSFGVELWGGGLDALEQLSEDDVCDVVINASSSSLHGEVPPVPAFLLGDGVLAYDMMYGAEPTVF LQHAAQCGARTADGLGMLVEQAAEAFYIWRGVRPRTAPVLADLRAALQAERKG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1789675, Length=286, Percent_Identity=44.4055944055944, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI1787983, Length=275, Percent_Identity=30.5454545454545, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320332, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROE_CUPPJ (Q46XB7)
Other databases:
- EMBL: CP000090 - RefSeq: YP_297060.1 - HSSP: Q9SQT8 - ProteinModelPortal: Q46XB7 - SMR: Q46XB7 - GeneID: 3611866 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A2855 - NMPDR: fig|264198.3.peg.3461 - HOGENOM: HBG553408 - OMA: DQYVVFG - ProtClustDB: PRK00258 - BioCyc: REUT264198:REUT_A2855-MONOMER - GO: GO:0005737 - HAMAP: MF_00222 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR00507
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N
EC number: =1.1.1.25
Molecular weight: Translated: 31385; Mature: 31254
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: ACT_SITE 74-74
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTESSQPADRYVVVGNPVAHSRSPFIHAAFARQTGEAVEYGRLEAPLDAFADTMRAFL CCCCCCCCCCCCEEEECCCCCCCCCCCEEEHHHHHCCCHHHHCCCCCCHHHHHHHHHHHH AEGGYGFNVTVPFKLQAYDLADRLTPRAEAAGAVNTMWIEDGLIHGDNTDGIGLVRDIQD HCCCCCEEEEEEEEEEEEHHHHHCCCCHHHCCCEEEEEEECCEEECCCCCCCHHHHHHHH NLDTLLEDKRVLLLGAGGAAMGAMLPLIECRPSRIVVANRTASRASDMLEEFVEAADSFG HHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC VELWGGGLDALEQLSEDDVCDVVINASSSSLHGEVPPVPAFLLGDGVLAYDMMYGAEPTV EEEECCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCHH FLQHAAQCGARTADGLGMLVEQAAEAFYIWRGVRPRTAPVLADLRAALQAERKG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSTESSQPADRYVVVGNPVAHSRSPFIHAAFARQTGEAVEYGRLEAPLDAFADTMRAFL CCCCCCCCCCCEEEECCCCCCCCCCCEEEHHHHHCCCHHHHCCCCCCHHHHHHHHHHHH AEGGYGFNVTVPFKLQAYDLADRLTPRAEAAGAVNTMWIEDGLIHGDNTDGIGLVRDIQD HCCCCCEEEEEEEEEEEEHHHHHCCCCHHHCCCEEEEEEECCEEECCCCCCCHHHHHHHH NLDTLLEDKRVLLLGAGGAAMGAMLPLIECRPSRIVVANRTASRASDMLEEFVEAADSFG HHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC VELWGGGLDALEQLSEDDVCDVVINASSSSLHGEVPPVPAFLLGDGVLAYDMMYGAEPTV EEEECCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCHH FLQHAAQCGARTADGLGMLVEQAAEAFYIWRGVRPRTAPVLADLRAALQAERKG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA