| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is ispH [H]
Identifier: 73542415
GI number: 73542415
Start: 2997538
End: 2998512
Strand: Reverse
Name: ispH [H]
Synonym: Reut_A2730
Alternate gene names: 73542415
Gene position: 2998512-2997538 (Counterclockwise)
Preceding gene: 73542416
Following gene: 73542414
Centisome position: 78.77
GC content: 66.97
Gene sequence:
>975_bases ATGCCTGACCTGACTACCGCACCCGATGCCGAGATCCTGATGGCGCAGCCGCGCGGCTTTTGCGCCGGCGTCGACCGCGC CATCGAGATCGTCGAGCGCGCGCTTACGCGTTTCGGGGCGCCCATCTATGTGCGTCACGAGATTGTCCACAACGCCTATG TCGTCGCCGACCTGCGCCGCAAGGGCGCGGTGTTCGTGCGCGAGCTCGATGAAGTGCCGGCTGGCGCTACTGTCATCTTC AGCGCCCACGGCGTGTCGAAGGACGTTCGCGCCGAAGCTGCCTCACGCGGCCTCAACGTGTTCGACGCGACTTGCCCGCT CGTGACCAAGGTCCATGTCGAAGTCGGCAAGATGCGCGCGGAGGGCTGCGAGATCGTGATGATCGGCCACCGCGGGCACC CGGAAGTCGAAGGCACCATGGGCCAGGCCGAAGGCGGCATGCTGCTGGTGGAGTCGGTGGCGGATGTCGCAGGGCTGGTG GTTGCCGATCCCGCGCGCCTGGCGTACGTGACGCAGACCACGCTGTCGGTCGATGAAACCCTCGAGATCGTGGCCGCGCT CAAGGCCCGTTTCCCGCTGATCCGCGAGCCAAAGAAACAGGACATCTGCTACGCCACGCAGAACCGCCAGGATGCCGTTA AGTTCATGGCGCCCCAGGTCGATGTGGTGATCGTGGTGGGCAGCCCCAACAGTTCGAACTCGAACCGGTTGCGCGAACTG GCCGCACGACTGGGCGTGCCCGCCTATATGGTGGATGCACCCGATCAGGTGCACCCGGAATGGGTGGCGGGCAAGCGGCG CATCGGCCTGACCGCCGGCGCATCGGCGCCCGAGGAACTGGCCCAGTCCATCGTTGCACGACTGCGCGAGCTCGGTGCCG GCCACGTGCGTGCCCTTGCCGGCATCGAAGAAAACATGGCGTTCCCGCTACCGCGCGGCCTCCAGGCCGCTGCCACGGTC GGCGTCACGGCCTGA
Upstream 100 bases:
>100_bases CTGTTCGATTTCAACCATCCGCTGGCCGGGCAGACGATCCTGTTCGACGTGCAGCTGATCGGGATCCTCTGATTGCGCTC ACTTGTCCTGACATTGCAGC
Downstream 100 bases:
>100_bases CCTGCTGACCTGTCTTGCCGGCGCCGCGTTCTGCGGCGCCTCTCTCCTGCCTTTTCGTCAGACTGCTTTCGCGCGATGCG TGCGTGATCGCGCGCGCATT
Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPDLTTAPDAEILMAQPRGFCAGVDRAIEIVERALTRFGAPIYVRHEIVHNAYVVADLRRKGAVFVRELDEVPAGATVIF SAHGVSKDVRAEAASRGLNVFDATCPLVTKVHVEVGKMRAEGCEIVMIGHRGHPEVEGTMGQAEGGMLLVESVADVAGLV VADPARLAYVTQTTLSVDETLEIVAALKARFPLIREPKKQDICYATQNRQDAVKFMAPQVDVVIVVGSPNSSNSNRLREL AARLGVPAYMVDAPDQVHPEWVAGKRRIGLTAGASAPEELAQSIVARLRELGAGHVRALAGIEENMAFPLPRGLQAAATV GVTA
Sequences:
>Translated_324_residues MPDLTTAPDAEILMAQPRGFCAGVDRAIEIVERALTRFGAPIYVRHEIVHNAYVVADLRRKGAVFVRELDEVPAGATVIF SAHGVSKDVRAEAASRGLNVFDATCPLVTKVHVEVGKMRAEGCEIVMIGHRGHPEVEGTMGQAEGGMLLVESVADVAGLV VADPARLAYVTQTTLSVDETLEIVAALKARFPLIREPKKQDICYATQNRQDAVKFMAPQVDVVIVVGSPNSSNSNRLREL AARLGVPAYMVDAPDQVHPEWVAGKRRIGLTAGASAPEELAQSIVARLRELGAGHVRALAGIEENMAFPLPRGLQAAATV GVTA >Mature_323_residues PDLTTAPDAEILMAQPRGFCAGVDRAIEIVERALTRFGAPIYVRHEIVHNAYVVADLRRKGAVFVRELDEVPAGATVIFS AHGVSKDVRAEAASRGLNVFDATCPLVTKVHVEVGKMRAEGCEIVMIGHRGHPEVEGTMGQAEGGMLLVESVADVAGLVV ADPARLAYVTQTTLSVDETLEIVAALKARFPLIREPKKQDICYATQNRQDAVKFMAPQVDVVIVVGSPNSSNSNRLRELA ARLGVPAYMVDAPDQVHPEWVAGKRRIGLTAGASAPEELAQSIVARLRELGAGHVRALAGIEENMAFPLPRGLQAAATVG VTA
Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]
COG id: COG0761
COG function: function code IM; Penicillin tolerance protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispH family [H]
Homologues:
Organism=Escherichia coli, GI1786212, Length=308, Percent_Identity=59.4155844155844, Blast_Score=372, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003451 [H]
Pfam domain/function: PF02401 LYTB [H]
EC number: =1.17.1.2 [H]
Molecular weight: Translated: 34560; Mature: 34429
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLTTAPDAEILMAQPRGFCAGVDRAIEIVERALTRFGAPIYVRHEIVHNAYVVADLRR CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHEEEEHHH KGAVFVRELDEVPAGATVIFSAHGVSKDVRAEAASRGLNVFDATCPLVTKVHVEVGKMRA CCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCHHEEEHHHHHHHHC EGCEIVMIGHRGHPEVEGTMGQAEGGMLLVESVADVAGLVVADPARLAYVTQTTLSVDET CCCCEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHCEEEECCCCEEEEEEHHHCHHHH LEIVAALKARFPLIREPKKQDICYATQNRQDAVKFMAPQVDVVIVVGSPNSSNSNRLREL HHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH AARLGVPAYMVDAPDQVHPEWVAGKRRIGLTAGASAPEELAQSIVARLRELGAGHVRALA HHHHCCCEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHH GIEENMAFPLPRGLQAAATVGVTA CCHHCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure PDLTTAPDAEILMAQPRGFCAGVDRAIEIVERALTRFGAPIYVRHEIVHNAYVVADLRR CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHEEEEHHH KGAVFVRELDEVPAGATVIFSAHGVSKDVRAEAASRGLNVFDATCPLVTKVHVEVGKMRA CCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCHHEEEHHHHHHHHC EGCEIVMIGHRGHPEVEGTMGQAEGGMLLVESVADVAGLVVADPARLAYVTQTTLSVDET CCCCEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHCEEEECCCCEEEEEEHHHCHHHH LEIVAALKARFPLIREPKKQDICYATQNRQDAVKFMAPQVDVVIVVGSPNSSNSNRLREL HHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH AARLGVPAYMVDAPDQVHPEWVAGKRRIGLTAGASAPEELAQSIVARLRELGAGHVRALA HHHHCCCEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHH GIEENMAFPLPRGLQAAATVGVTA CCHHCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]