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The map label for this gene is yaaD [H]

Identifier: 73542416

GI number: 73542416

Start: 2998541

End: 2999029

Strand: Reverse

Name: yaaD [H]

Synonym: Reut_A2731

Alternate gene names: 73542416

Gene position: 2999029-2998541 (Counterclockwise)

Preceding gene: 73542421

Following gene: 73542415

Centisome position: 78.79

GC content: 64.01

Gene sequence:

>489_bases
ATGAATTTGCAAACATTTGCGTCGGAAGCCGACGGCGGCGCGGCTGACCGCAAGACGGTCCAGGCCGACTCCTTCCTGAC
CCTCCACTACAGTATCTCTCTCGAAAACGGCACCGAAGTCGTGAGCACGTTCGAGGAGAATCCCGCCACGATGCTGCTTG
GCCAGGGGCAGCTCGCCCCGACGCTGGAGCAGGCGCTGCTCGGCATGCCCGAGGGCGAGCGCATGACCTACCGCCTGGCG
CCCGAACAGGCCTTCGGCCCGCGCAACCCGGAATTGCTGCAGTGGGTATCGCTCGCCACGCTGCGCGAGAACAGCTCGTT
CGAGGAAGACTACAGCCCCGGCGATCTGGTCGAGTTCAACGCACCCGGCGGTGGCAAATATGCGGGCGTCCTCAAGGAGA
TCGGCGACACTGCGGCGCTGTTCGATTTCAACCATCCGCTGGCCGGGCAGACGATCCTGTTCGACGTGCAGCTGATCGGG
ATCCTCTGA

Upstream 100 bases:

>100_bases
GAGTCTCGGGACGGGTGCGTCGGGCCGGGCGAGGGTGGATCGGCAGGGCGTCCGGTGGCCCAGTCGAATACAATACGGGT
TGTCGACAGGTTGATCACCC

Downstream 100 bases:

>100_bases
TTGCGCTCACTTGTCCTGACATTGCAGCATGCCTGACCTGACTACCGCACCCGATGCCGAGATCCTGATGGCGCAGCCGC
GCGGCTTTTGCGCCGGCGTC

Product: peptidylprolyl isomerase, FKBP-type

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNLQTFASEADGGAADRKTVQADSFLTLHYSISLENGTEVVSTFEENPATMLLGQGQLAPTLEQALLGMPEGERMTYRLA
PEQAFGPRNPELLQWVSLATLRENSSFEEDYSPGDLVEFNAPGGGKYAGVLKEIGDTAALFDFNHPLAGQTILFDVQLIG
IL

Sequences:

>Translated_162_residues
MNLQTFASEADGGAADRKTVQADSFLTLHYSISLENGTEVVSTFEENPATMLLGQGQLAPTLEQALLGMPEGERMTYRLA
PEQAFGPRNPELLQWVSLATLRENSSFEEDYSPGDLVEFNAPGGGKYAGVLKEIGDTAALFDFNHPLAGQTILFDVQLIG
IL
>Mature_162_residues
MNLQTFASEADGGAADRKTVQADSFLTLHYSISLENGTEVVSTFEENPATMLLGQGQLAPTLEQALLGMPEGERMTYRLA
PEQAFGPRNPELLQWVSLATLRENSSFEEDYSPGDLVEFNAPGGGKYAGVLKEIGDTAALFDFNHPLAGQTILFDVQLIG
IL

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=145, Percent_Identity=36.551724137931, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 17525; Mature: 17525

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQTFASEADGGAADRKTVQADSFLTLHYSISLENGTEVVSTFEENPATMLLGQGQLAP
CCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCHHHHHHCCCCEEEEEECCCCCH
TLEQALLGMPEGERMTYRLAPEQAFGPRNPELLQWVSLATLRENSSFEEDYSPGDLVEFN
HHHHHHHCCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
APGGGKYAGVLKEIGDTAALFDFNHPLAGQTILFDVQLIGIL
CCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MNLQTFASEADGGAADRKTVQADSFLTLHYSISLENGTEVVSTFEENPATMLLGQGQLAP
CCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCHHHHHHCCCCEEEEEECCCCCH
TLEQALLGMPEGERMTYRLAPEQAFGPRNPELLQWVSLATLRENSSFEEDYSPGDLVEFN
HHHHHHHCCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
APGGGKYAGVLKEIGDTAALFDFNHPLAGQTILFDVQLIGIL
CCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]