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The map label for this gene is ydcO [H]

Identifier: 73542048

GI number: 73542048

Start: 2606149

End: 2607327

Strand: Direct

Name: ydcO [H]

Synonym: Reut_A2362

Alternate gene names: 73542048

Gene position: 2606149-2607327 (Clockwise)

Preceding gene: 73542047

Following gene: 73542050

Centisome position: 68.47

GC content: 68.45

Gene sequence:

>1179_bases
ATGCCTGCCACCTCCCTGAAGCTGTCCGATCTTTCCGTTTCCGCGCTCGTCGCGGGCCTGATTGCCACGCTGACCGGCTA
CACCAGCTCTCTCGTGCTGATGATCCAGGCCGGGCAGGCTGCGCACCTGAGCAGTGCGCAGATCTCGTCCTGGCTGTGGG
CACTGTCGATCGGCATGGGCGTGACCACGATCGGCCTGTCGCTGGCCATGCGCGTGCCCGTGGTGGTGGCATGGTCCACG
CCCGGCGCCGCACTGCTGATCGCGAGCCTGCCGGGCGTGCCCTATGCGGAAGCGATCGGTGCCTTCCTGATGGCGGCGCT
GCTGATGACCGCCGCCGGGCTGACCGGCTGGTTCGACAAGCTGATGCGGGCGCTGCCGGCGAGCATTGCATCGGCGCTGC
TTGCCGGCATCCTGTTCCGGATCAGCGTGGATGTGTTCGTACAGGCGCAGGACCAGACGCTGCTGATGCTGGCGATGTTC
GCCGCCTATCTCGCTGGCCGGCGCTGGTGGCCACGCTACGCGGTGCCCGGTGTGCTGCTGGTTGGCGTGGCACTGGCCGG
CACGCTGGGCCAGTTGCACTTTGAAGGATTCCACCTGGCGGTGGCGGTACCGGTCTGGACTACGCCGGCATTCTCGTTCC
AGGCCTTTGTCAGCATCGCCATTCCGTTGTTCATCGTGGCGCTGGCCTCGCAGAACATTCCCGGCCTGGCGGTACTGCGC
GCGGACGGCTACCACGTGCCGGCATCGCCGCTGATTACCGTCACGGGCTTCGCCTCGGCCGTGCTGGCGCCGTTCGGCTC
GCACGGCATCAACCTGGCCGCCATCACGGCCGCCATCTGCACCGGGCCGCAGGCCGACGCCGACCCGGCACGGCGCTACA
CCGCTGCCGTGGTCTGCGGCGTGGGATATCTGTTGGCCGGCATCCTCGCGGCCAGCATTGCCGCGCTGTTCGCGGCCTTC
CCCAAAGCCGTGGTGGTGGCGCTGGCTGCGTTCGCGCTGCTCGGATCGATCGCCAACGGACTGACCGTGGCCATGCAGAC
GCCGGACGAGCGTGAAGCCGCGCTGATCACTTTCATGATCACCGCGTCCGGCATGACGCTGGCCGGCGTGGGCTCGGCCT
TCTGGGGCGTGGTGGGCGGCATGCTGACGCTGCTAGTGCTGCGCCGCAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
CGGATTCGGCAGCGAAGCAGCCAGGGACAACGGGCGGCAGCACTCATGCGAAGATGTCGGCCGTGCCGCTCAGGTCTCCT
TCCCGTCTCCTTCCTGCCTC

Downstream 100 bases:

>100_bases
CGACCCCTGACCGGTCAGCGGCTAATGGACTAGAGCAGCAGGAAGCCGATATCGCGAGACCGGACCTCTTCGAGCGCTAC
GCCCTTGCGGCGCTGGAACA

Product: benzoate membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPATSLKLSDLSVSALVAGLIATLTGYTSSLVLMIQAGQAAHLSSAQISSWLWALSIGMGVTTIGLSLAMRVPVVVAWST
PGAALLIASLPGVPYAEAIGAFLMAALLMTAAGLTGWFDKLMRALPASIASALLAGILFRISVDVFVQAQDQTLLMLAMF
AAYLAGRRWWPRYAVPGVLLVGVALAGTLGQLHFEGFHLAVAVPVWTTPAFSFQAFVSIAIPLFIVALASQNIPGLAVLR
ADGYHVPASPLITVTGFASAVLAPFGSHGINLAAITAAICTGPQADADPARRYTAAVVCGVGYLLAGILAASIAALFAAF
PKAVVVALAAFALLGSIANGLTVAMQTPDEREAALITFMITASGMTLAGVGSAFWGVVGGMLTLLVLRRKAA

Sequences:

>Translated_392_residues
MPATSLKLSDLSVSALVAGLIATLTGYTSSLVLMIQAGQAAHLSSAQISSWLWALSIGMGVTTIGLSLAMRVPVVVAWST
PGAALLIASLPGVPYAEAIGAFLMAALLMTAAGLTGWFDKLMRALPASIASALLAGILFRISVDVFVQAQDQTLLMLAMF
AAYLAGRRWWPRYAVPGVLLVGVALAGTLGQLHFEGFHLAVAVPVWTTPAFSFQAFVSIAIPLFIVALASQNIPGLAVLR
ADGYHVPASPLITVTGFASAVLAPFGSHGINLAAITAAICTGPQADADPARRYTAAVVCGVGYLLAGILAASIAALFAAF
PKAVVVALAAFALLGSIANGLTVAMQTPDEREAALITFMITASGMTLAGVGSAFWGVVGGMLTLLVLRRKAA
>Mature_391_residues
PATSLKLSDLSVSALVAGLIATLTGYTSSLVLMIQAGQAAHLSSAQISSWLWALSIGMGVTTIGLSLAMRVPVVVAWSTP
GAALLIASLPGVPYAEAIGAFLMAALLMTAAGLTGWFDKLMRALPASIASALLAGILFRISVDVFVQAQDQTLLMLAMFA
AYLAGRRWWPRYAVPGVLLVGVALAGTLGQLHFEGFHLAVAVPVWTTPAFSFQAFVSIAIPLFIVALASQNIPGLAVLRA
DGYHVPASPLITVTGFASAVLAPFGSHGINLAAITAAICTGPQADADPARRYTAAVVCGVGYLLAGILAASIAALFAAFP
KAVVVALAAFALLGSIANGLTVAMQTPDEREAALITFMITASGMTLAGVGSAFWGVVGGMLTLLVLRRKAA

Specific function: Unknown

COG id: COG3135

COG function: function code Q; Uncharacterized protein involved in benzoate metabolism

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081909, Length=383, Percent_Identity=43.0809399477807, Blast_Score=295, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004711 [H]

Pfam domain/function: PF03594 BenE [H]

EC number: NA

Molecular weight: Translated: 40074; Mature: 39943

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATSLKLSDLSVSALVAGLIATLTGYTSSLVLMIQAGQAAHLSSAQISSWLWALSIGMG
CCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
VTTIGLSLAMRVPVVVAWSTPGAALLIASLPGVPYAEAIGAFLMAALLMTAAGLTGWFDK
HHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LMRALPASIASALLAGILFRISVDVFVQAQDQTLLMLAMFAAYLAGRRWWPRYAVPGVLL
HHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VGVALAGTLGQLHFEGFHLAVAVPVWTTPAFSFQAFVSIAIPLFIVALASQNIPGLAVLR
HHHHHHHHHHHHEECCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
ADGYHVPASPLITVTGFASAVLAPFGSHGINLAAITAAICTGPQADADPARRYTAAVVCG
ECCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VGYLLAGILAASIAALFAAFPKAVVVALAAFALLGSIANGLTVAMQTPDEREAALITFMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEE
TASGMTLAGVGSAFWGVVGGMLTLLVLRRKAA
EECCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PATSLKLSDLSVSALVAGLIATLTGYTSSLVLMIQAGQAAHLSSAQISSWLWALSIGMG
CCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
VTTIGLSLAMRVPVVVAWSTPGAALLIASLPGVPYAEAIGAFLMAALLMTAAGLTGWFDK
HHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LMRALPASIASALLAGILFRISVDVFVQAQDQTLLMLAMFAAYLAGRRWWPRYAVPGVLL
HHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VGVALAGTLGQLHFEGFHLAVAVPVWTTPAFSFQAFVSIAIPLFIVALASQNIPGLAVLR
HHHHHHHHHHHHEECCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
ADGYHVPASPLITVTGFASAVLAPFGSHGINLAAITAAICTGPQADADPARRYTAAVVCG
ECCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VGYLLAGILAASIAALFAAFPKAVVVALAAFALLGSIANGLTVAMQTPDEREAALITFMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEE
TASGMTLAGVGSAFWGVVGGMLTLLVLRRKAA
EECCCEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]