| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73541945
Identifier: 73541945
GI number: 73541945
Start: 2491711
End: 2492349
Strand: Reverse
Name: 73541945
Synonym: Reut_A2258
Alternate gene names: NA
Gene position: 2492349-2491711 (Counterclockwise)
Preceding gene: 73541946
Following gene: 73541944
Centisome position: 65.48
GC content: 65.41
Gene sequence:
>639_bases ATGGGTCAGGCTCATAAGCAGTCGGTTCATGTAGTGGAAGCGGCGGAGCAAATCTCCGTCCTGATGGATGGCGAGTTGTC GCCGCACGAGGTCGATCCCGTACTGGCGCTCGCGAAAAGCGAGCCTGGCATGGAGAACTGGACCATGTTCCAGATGATCG GCGATACGCTGCGGTCGGAAGAGTTGAGCCATGCGGGCCCGACCGGCGATTTTCTCGCCCGCTTCGCCGCGCGCCTCGAA GACGAGCCGCACGTACTGGTGCCTGCCGTGGCCCAGGCCGCTGGCATGCGACAGCGCCTGCTGGTGCGACCTTCGTGGGT GCGGCGCGTGATGCCGGGCACCGCGATTGCCGCGGCAGTAGCGGCTGTGAGTTGGGTCGTCGTTCCCCAGTTGCGCGGAC CGTCCGACCTGGGTACGCCTGACGCCGTGGTTGCGCGCGTCGACCAGCCCGCCGCCGCGAAAGCCGCGGCCGCGAACATC GTTACCGTCGCAGCCGAAAACGCCCAGATGATCCGCGATCCGCGGCTGGACGAATACCTGCGTGCCCACCGCACGTCCGT CGCAACGGAGGCATTCGTGCCGACCATGCGTACGGTCGCCAACGGTGCCAATTTCTCTCAGGACAATTCGCAGGAATAA
Upstream 100 bases:
>100_bases GTCGTGCGGCCAGCGTTGCAGCCTATTCCTGCATCGATAAGCGACAGCAAGTGACGGGATTATCGGTGTTCAATGGAATT GGAATGTCTTGGGGTGGGAA
Downstream 100 bases:
>100_bases TGCCGGACATGCACAAAGGATGGTCGCCCGCCAACGTAGCGGGCGCACCGAGAATGGGGGCCCTGCGTAGGTCCTTTTTT CTGGCCTTGTGTCTGAGCGC
Product: anti sigma-E protein RseA, N-terminal
Products: NA
Alternate protein names: Sigma-E Factor Negative Regulatory Protein; Anti Sigma-E Protein RseA N-Terminal
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MGQAHKQSVHVVEAAEQISVLMDGELSPHEVDPVLALAKSEPGMENWTMFQMIGDTLRSEELSHAGPTGDFLARFAARLE DEPHVLVPAVAQAAGMRQRLLVRPSWVRRVMPGTAIAAAVAAVSWVVVPQLRGPSDLGTPDAVVARVDQPAAAKAAAANI VTVAAENAQMIRDPRLDEYLRAHRTSVATEAFVPTMRTVANGANFSQDNSQE
Sequences:
>Translated_212_residues MGQAHKQSVHVVEAAEQISVLMDGELSPHEVDPVLALAKSEPGMENWTMFQMIGDTLRSEELSHAGPTGDFLARFAARLE DEPHVLVPAVAQAAGMRQRLLVRPSWVRRVMPGTAIAAAVAAVSWVVVPQLRGPSDLGTPDAVVARVDQPAAAKAAAANI VTVAAENAQMIRDPRLDEYLRAHRTSVATEAFVPTMRTVANGANFSQDNSQE >Mature_211_residues GQAHKQSVHVVEAAEQISVLMDGELSPHEVDPVLALAKSEPGMENWTMFQMIGDTLRSEELSHAGPTGDFLARFAARLED EPHVLVPAVAQAAGMRQRLLVRPSWVRRVMPGTAIAAAVAAVSWVVVPQLRGPSDLGTPDAVVARVDQPAAAKAAAANIV TVAAENAQMIRDPRLDEYLRAHRTSVATEAFVPTMRTVANGANFSQDNSQE
Specific function: Unknown
COG id: COG3073
COG function: function code T; Negative regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22718; Mature: 22587
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAHKQSVHVVEAAEQISVLMDGELSPHEVDPVLALAKSEPGMENWTMFQMIGDTLRSE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH ELSHAGPTGDFLARFAARLEDEPHVLVPAVAQAAGMRQRLLVRPSWVRRVMPGTAIAAAV HHHCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH AAVSWVVVPQLRGPSDLGTPDAVVARVDQPAAAKAAAANIVTVAAENAQMIRDPRLDEYL HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHCCCCHHHHH RAHRTSVATEAFVPTMRTVANGANFSQDNSQE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GQAHKQSVHVVEAAEQISVLMDGELSPHEVDPVLALAKSEPGMENWTMFQMIGDTLRSE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH ELSHAGPTGDFLARFAARLEDEPHVLVPAVAQAAGMRQRLLVRPSWVRRVMPGTAIAAAV HHHCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH AAVSWVVVPQLRGPSDLGTPDAVVARVDQPAAAKAAAANIVTVAAENAQMIRDPRLDEYL HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHCCCCHHHHH RAHRTSVATEAFVPTMRTVANGANFSQDNSQE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA