| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is phoR [H]
Identifier: 73541849
GI number: 73541849
Start: 2383992
End: 2385326
Strand: Reverse
Name: phoR [H]
Synonym: Reut_A2161
Alternate gene names: 73541849
Gene position: 2385326-2383992 (Counterclockwise)
Preceding gene: 73541850
Following gene: 73541847
Centisome position: 62.66
GC content: 63.6
Gene sequence:
>1335_bases ATGAATGTCATCTGGGCCCGCTCCGTGGCCATCCTGATCAGCCTGGTGGTGGTTGCCGTCGGGGTCTATCTTCTGGCGGG GGCGGTGCCTGCGCTGGCGGTGATGAGTGTGTCGCTGCTTTGCCTGGTGGCATTCCACCTGTACCAGATCAACCGGCTGT GGAAAGTGCTGGACGCGCCAGCGTATGGTGAAATTCCCAGCGCGCCGGGCCTGTGGGGCGAGGTCTATTACCGCCTGCAC CGGCTGGTCAAGCGTTGGCGCCTGCAGGTACTGCAAGTGGAGCAGCAGCACACGCGCTTTATCCAGGCGATCCAGGCTTC GCCCAACGGCGTGCTGATGCTGGACGACGCCGACCAGATCGAGTGGTGCAACAGCGTGGCTGAACTGCACCTCGGCTTGA ATGCACGGCGCGATGTGCGCCAGCGCATTACGCACCTGATTCGCCGTCCCGAGTTCGTTCACTACCTGACACGCCAGCGC TTTGATGAGCCATTGGCCATGCGCGACATGGGCGAGCACAAGCAGGGCGTGATCTCGGTGCAGGTGCTGCCGTATGGCGA CAACCGCAAGCTGGTCATCACGCAGGACATCACCAAGCTCGAGAATACGGAAGCCATGCGGCGCGACTTTGTCGCCAACG TTTCGCATGAGTTGAAGACGCCGCTCACCGTGCTGACCGGCTTCCTGGAAACCGTGCGTGACCTGCCGGTTTCCGAGGAA GACCGTCAGCGCTATGTCGACATGATGCTGGTGCAGTCCATGCGCATGCAGAGCATCGTGGAAGACCTGCTGGCGCTGGC CAAGCTGGAAAGCGATGCGCAACCGCCCGGGCAGGATCTCGTCCCGGTCCGCGAGATGGTGGATCATCTCGTCCACGATG CGGAGGCGCTGTCACAAGGCCGCCATCATATCGCTGCGGAGATCGATCCGACCGTGGAGCTGCGCGGCACCGAGTCCGAA CTGATGTCGGCGCTGGGCAACCTGGTATCGAATGCCGTGCGCTATACGCCCGCCGGCGGGCGAATCACGGTCCGGCTCGG CTGGGATGATGGACATGCCGTGTTTTCGGTCGCGGATACCGGGCTGGGCATCGCGCCCGAGCATATTCCCCGGCTAACCG AGCGTTTCTACCGTGTCGACCGCAGCCGGTCGCGTGACACCGGCGGTACCGGGCTTGGCCTGGCAATCGTCAAGCATGTG GTCTCGCGCCATCATGCCGAGCTGCGCGTGAACAGCGAAGTGGGGCGGGGCAGCGTGTTTCGGATCATTTTTCCGATCGA GCGCAGCGTGCGCGAGGTGGCGGACACTGCCGATCCTTCGCGCCGCGCTGCCTGA
Upstream 100 bases:
>100_bases TTGCGTGGCCAGTTGTCACGGATTCGTGGCAAACTCTGCCGCAACGGCGGTTCCCCCGCCACTTGCCCGCACCGCGGGTT CCTGAGTCTCCTTTGCGCGC
Downstream 100 bases:
>100_bases GCGCTGCTGGCGGCTATTTGCCGCTGGCAACCATCCTTTCCCTTGGAAAAATGGCCCGCACAAGCGGGCCATTTCTTTCT GGCGGAGCCTGGCTTATGCG
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MNVIWARSVAILISLVVVAVGVYLLAGAVPALAVMSVSLLCLVAFHLYQINRLWKVLDAPAYGEIPSAPGLWGEVYYRLH RLVKRWRLQVLQVEQQHTRFIQAIQASPNGVLMLDDADQIEWCNSVAELHLGLNARRDVRQRITHLIRRPEFVHYLTRQR FDEPLAMRDMGEHKQGVISVQVLPYGDNRKLVITQDITKLENTEAMRRDFVANVSHELKTPLTVLTGFLETVRDLPVSEE DRQRYVDMMLVQSMRMQSIVEDLLALAKLESDAQPPGQDLVPVREMVDHLVHDAEALSQGRHHIAAEIDPTVELRGTESE LMSALGNLVSNAVRYTPAGGRITVRLGWDDGHAVFSVADTGLGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV VSRHHAELRVNSEVGRGSVFRIIFPIERSVREVADTADPSRRAA
Sequences:
>Translated_444_residues MNVIWARSVAILISLVVVAVGVYLLAGAVPALAVMSVSLLCLVAFHLYQINRLWKVLDAPAYGEIPSAPGLWGEVYYRLH RLVKRWRLQVLQVEQQHTRFIQAIQASPNGVLMLDDADQIEWCNSVAELHLGLNARRDVRQRITHLIRRPEFVHYLTRQR FDEPLAMRDMGEHKQGVISVQVLPYGDNRKLVITQDITKLENTEAMRRDFVANVSHELKTPLTVLTGFLETVRDLPVSEE DRQRYVDMMLVQSMRMQSIVEDLLALAKLESDAQPPGQDLVPVREMVDHLVHDAEALSQGRHHIAAEIDPTVELRGTESE LMSALGNLVSNAVRYTPAGGRITVRLGWDDGHAVFSVADTGLGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV VSRHHAELRVNSEVGRGSVFRIIFPIERSVREVADTADPSRRAA >Mature_444_residues MNVIWARSVAILISLVVVAVGVYLLAGAVPALAVMSVSLLCLVAFHLYQINRLWKVLDAPAYGEIPSAPGLWGEVYYRLH RLVKRWRLQVLQVEQQHTRFIQAIQASPNGVLMLDDADQIEWCNSVAELHLGLNARRDVRQRITHLIRRPEFVHYLTRQR FDEPLAMRDMGEHKQGVISVQVLPYGDNRKLVITQDITKLENTEAMRRDFVANVSHELKTPLTVLTGFLETVRDLPVSEE DRQRYVDMMLVQSMRMQSIVEDLLALAKLESDAQPPGQDLVPVREMVDHLVHDAEALSQGRHHIAAEIDPTVELRGTESE LMSALGNLVSNAVRYTPAGGRITVRLGWDDGHAVFSVADTGLGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV VSRHHAELRVNSEVGRGSVFRIIFPIERSVREVADTADPSRRAA
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=432, Percent_Identity=38.1944444444444, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI1786783, Length=233, Percent_Identity=34.7639484978541, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=31.1355311355311, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI145693157, Length=343, Percent_Identity=28.5714285714286, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI48994928, Length=409, Percent_Identity=25.1833740831296, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788713, Length=277, Percent_Identity=27.7978339350181, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1790861, Length=214, Percent_Identity=34.5794392523364, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790346, Length=218, Percent_Identity=28.4403669724771, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87082128, Length=243, Percent_Identity=28.8065843621399, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1788549, Length=396, Percent_Identity=22.7272727272727, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789149, Length=237, Percent_Identity=29.1139240506329, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1790551, Length=217, Percent_Identity=31.3364055299539, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789403, Length=219, Percent_Identity=31.0502283105023, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1789808, Length=222, Percent_Identity=30.1801801801802, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787894, Length=238, Percent_Identity=27.7310924369748, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788279, Length=218, Percent_Identity=26.605504587156, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790436, Length=223, Percent_Identity=23.7668161434978, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787374, Length=263, Percent_Identity=23.9543726235741, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI87081816, Length=249, Percent_Identity=26.1044176706827, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=26.3392857142857, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49891; Mature: 49891
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIWARSVAILISLVVVAVGVYLLAGAVPALAVMSVSLLCLVAFHLYQINRLWKVLDAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AYGEIPSAPGLWGEVYYRLHRLVKRWRLQVLQVEQQHTRFIQAIQASPNGVLMLDDADQI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH EWCNSVAELHLGLNARRDVRQRITHLIRRPEFVHYLTRQRFDEPLAMRDMGEHKQGVISV HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCCEEEE QVLPYGDNRKLVITQDITKLENTEAMRRDFVANVSHELKTPLTVLTGFLETVRDLPVSEE EEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHH DRQRYVDMMLVQSMRMQSIVEDLLALAKLESDAQPPGQDLVPVREMVDHLVHDAEALSQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC RHHIAAEIDPTVELRGTESELMSALGNLVSNAVRYTPAGGRITVRLGWDDGHAVFSVADT CCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEEEEECC GLGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVVSRHHAELRVNSEVGRGSVF CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEE RIIFPIERSVREVADTADPSRRAA EEEEHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNVIWARSVAILISLVVVAVGVYLLAGAVPALAVMSVSLLCLVAFHLYQINRLWKVLDAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AYGEIPSAPGLWGEVYYRLHRLVKRWRLQVLQVEQQHTRFIQAIQASPNGVLMLDDADQI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH EWCNSVAELHLGLNARRDVRQRITHLIRRPEFVHYLTRQRFDEPLAMRDMGEHKQGVISV HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCCEEEE QVLPYGDNRKLVITQDITKLENTEAMRRDFVANVSHELKTPLTVLTGFLETVRDLPVSEE EEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHH DRQRYVDMMLVQSMRMQSIVEDLLALAKLESDAQPPGQDLVPVREMVDHLVHDAEALSQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC RHHIAAEIDPTVELRGTESELMSALGNLVSNAVRYTPAGGRITVRLGWDDGHAVFSVADT CCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEEEEECC GLGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVVSRHHAELRVNSEVGRGSVF CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEE RIIFPIERSVREVADTADPSRRAA EEEEHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3550103; 9278503; 2187152; 8391104 [H]