| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is phoB [H]
Identifier: 73541850
GI number: 73541850
Start: 2385446
End: 2386153
Strand: Reverse
Name: phoB [H]
Synonym: Reut_A2162
Alternate gene names: 73541850
Gene position: 2386153-2385446 (Counterclockwise)
Preceding gene: 73541851
Following gene: 73541849
Centisome position: 62.69
GC content: 61.86
Gene sequence:
>708_bases ATGCCAAGCAGTATTCTCGTTGTCGAAGATGAACCGGCGATCGCTGAACTAATCGCCGTCAACCTGCAGCACGCGGGGCA CTATCCGATCCGGGCCTACAACGCCGAACAGGCGCTGTCGCTGATGAGCGACGTGCTGCCAGACCTGGTGCTGCTGGACT GGATGCTACCGGGCAAGTCAGGCGCCACCTTCGCCAAGGAGTTGCGTGCGAACGACCGCACCAAGCAGATTCCCATCATC ATGCTCACCGCCCGCAGCGAAGAGCAGGACAAGGTGATGGGGCTCGAAGCCGGTGCGGACGACTATGTCACCAAGCCGTT TTCGCCCAAGGAACTGCTTGCCCGCATCAAAGCCGTGCTGCGCCGCCGTGCGCCGCAGCTCACCGATGATGTGGTGGCCA TCAATGGCCTGCGTCTGGATCCGGCCACGCACCGCGTGACCGGCGAAGACAACGCCGGCCCGATCAAGCTCGACCTCGGT CCTACAGAGTTCCGGTTGCTTCACTTCCTGATGACGCATCCGGAGCGCGTGCATAGCCGTTCGCAACTGCTGGATCAAGT GTGGGGCGATCACGTGTTCGTCGAAGAACGTACGGTCGACGTGCATATCAAGCGCCTGCGTGCTGCGCTGACGCCGGGCG GCTACAGCAATATGATTGAAACCGTACGCGGCAGCGGTTACCGGCTGGCTCGCACGCCAGGCAATTGA
Upstream 100 bases:
>100_bases ATCTACATCGTCAAGGGGACGGATGTCCGCCACGCCTCGCGCGAGGACATGGAGCGTGAGGCCCTGAGCTGAGCGGCGTT ATCTCCGGAGAAACATACAC
Downstream 100 bases:
>100_bases GATTGGCCCTGGCCATCCTTTGCGTGGCCAGTTGTCACGGATTCGTGGCAAACTCTGCCGCAACGGCGGTTCCCCCGCCA CTTGCCCGCACCGCGGGTTC
Product: phosphate regulon transcriptional regulatory protein phoB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPSSILVVEDEPAIAELIAVNLQHAGHYPIRAYNAEQALSLMSDVLPDLVLLDWMLPGKSGATFAKELRANDRTKQIPII MLTARSEEQDKVMGLEAGADDYVTKPFSPKELLARIKAVLRRRAPQLTDDVVAINGLRLDPATHRVTGEDNAGPIKLDLG PTEFRLLHFLMTHPERVHSRSQLLDQVWGDHVFVEERTVDVHIKRLRAALTPGGYSNMIETVRGSGYRLARTPGN
Sequences:
>Translated_235_residues MPSSILVVEDEPAIAELIAVNLQHAGHYPIRAYNAEQALSLMSDVLPDLVLLDWMLPGKSGATFAKELRANDRTKQIPII MLTARSEEQDKVMGLEAGADDYVTKPFSPKELLARIKAVLRRRAPQLTDDVVAINGLRLDPATHRVTGEDNAGPIKLDLG PTEFRLLHFLMTHPERVHSRSQLLDQVWGDHVFVEERTVDVHIKRLRAALTPGGYSNMIETVRGSGYRLARTPGN >Mature_234_residues PSSILVVEDEPAIAELIAVNLQHAGHYPIRAYNAEQALSLMSDVLPDLVLLDWMLPGKSGATFAKELRANDRTKQIPIIM LTARSEEQDKVMGLEAGADDYVTKPFSPKELLARIKAVLRRRAPQLTDDVVAINGLRLDPATHRVTGEDNAGPIKLDLGP TEFRLLHFLMTHPERVHSRSQLLDQVWGDHVFVEERTVDVHIKRLRAALTPGGYSNMIETVRGSGYRLARTPGN
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=56.9565217391304, Blast_Score=278, Evalue=2e-76, Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=42.0353982300885, Blast_Score=164, Evalue=5e-42, Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=38.5281385281385, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1790860, Length=233, Percent_Identity=39.0557939914163, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=36.7713004484305, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=35.8407079646018, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=34.0807174887892, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=33.8983050847458, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1786911, Length=230, Percent_Identity=35.2173913043478, Blast_Score=120, Evalue=6e-29, Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=38.034188034188, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787229, Length=237, Percent_Identity=33.7552742616034, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1789402, Length=228, Percent_Identity=33.7719298245614, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1790552, Length=232, Percent_Identity=32.7586206896552, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI145693140, Length=240, Percent_Identity=32.9166666666667, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=36.1111111111111, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26125; Mature: 25994
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSILVVEDEPAIAELIAVNLQHAGHYPIRAYNAEQALSLMSDVLPDLVLLDWMLPGKS CCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCC GATFAKELRANDRTKQIPIIMLTARSEEQDKVMGLEAGADDYVTKPFSPKELLARIKAVL CCHHHHHHHCCCCCCCCCEEEEECCCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHH RRRAPQLTDDVVAINGLRLDPATHRVTGEDNAGPIKLDLGPTEFRLLHFLMTHPERVHSR HHCCCCCCCCEEEECCEEECCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHCHHHHHHH SQLLDQVWGDHVFVEERTVDVHIKRLRAALTPGGYSNMIETVRGSGYRLARTPGN HHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCC >Mature Secondary Structure PSSILVVEDEPAIAELIAVNLQHAGHYPIRAYNAEQALSLMSDVLPDLVLLDWMLPGKS CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCC GATFAKELRANDRTKQIPIIMLTARSEEQDKVMGLEAGADDYVTKPFSPKELLARIKAVL CCHHHHHHHCCCCCCCCCEEEEECCCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHH RRRAPQLTDDVVAINGLRLDPATHRVTGEDNAGPIKLDLGPTEFRLLHFLMTHPERVHSR HHCCCCCCCCEEEECCEEECCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHCHHHHHHH SQLLDQVWGDHVFVEERTVDVHIKRLRAALTPGGYSNMIETVRGSGYRLARTPGN HHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]