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The map label for this gene is rodZ [H]

Identifier: 73541775

GI number: 73541775

Start: 2295195

End: 2296211

Strand: Reverse

Name: rodZ [H]

Synonym: Reut_A2087

Alternate gene names: 73541775

Gene position: 2296211-2295195 (Counterclockwise)

Preceding gene: 73541776

Following gene: 73541774

Centisome position: 60.32

GC content: 69.22

Gene sequence:

>1017_bases
ATGAGTGAGCAAGAGCGCGCCGCAGGCCAGGCCGCATCGACGGGACACGTCGGCGGGGGCGCGACCGATTCAGAACGTGA
AGCCGTGGCGCGCGAGATCGGCGCCCTGTTGGCGCAGGCACGGGAATCGCAACGGATGTCCGTCGAGGACGTGAGCGCCC
GTCTGAAGGTGGCGGCGCCGAAGCTCGTGGCGATCGAATCCGGCAACGTCGAGGCGCTGCCCGACATCACGTTTGCCAAG
GGCGTGATGCGCGCGTACGCACGCATGTTGCACGTGGACATTGACGGCTTGCTTGCGCGTTTCCACCCGCGGCCCGTGCA
GGTCACCGAAATGGCGCGCCAGCGCGAAGGCGGTCTCAACGAGACGTTTGACGATCGCAGGCGCTTTGGCAAGCGCGGTG
GCGGCGCAGGGGCCGGTGGGCGCTGGGTTTGGCTGGCACTCGTGATTGCCGGCCTGGCGGCAGGCGGCTGGTTCGGGCTC
GACCATATGAAACAATGGCTGGAAGCGCGCAACAGCGCCGCTCAGGCCGCGCCAGCCGAAGTGCAGGAACCGGCGGGCCA
GGGCGGCGAGCCGGGCACCGTGACGGCTGCACTGCCGCCGGTCATGGCTGCCGCCGACTCTCCGGCTCCGTCCGAGGAAT
TGCCCGCCAGCGCGCCGGCCGCGAGCGGCGTCGCGGTGCCCGCACAGTCCGCGGCAGCGACCACGGCCGTGCCCGCCGTG
GCAACGACGGTCACGCCGGTTGCCAATACGGCGCCTGTTGCAGCGACTCCCGCGGCGCAAGGCGAACTTCAGATCAAGTT
CTCCGCCGATACCTGGTACGAGATCCGCGACCGCAACGGCAAGGTTGTCCTCGGCGGTACCGCCAAGGCCGGCCAGGAAG
TCGCGGGCGGCGGCACGGCACCGTACAAGGTGACCATCGGCAACGTCAAGGGTGTGGAATCGATGAGCCGGAACGGCACG
CCGGTTGACCTGAAGGCGGCGAATCGCAACAACGTGGCGCGGTTGACGCTGCCCTGA

Upstream 100 bases:

>100_bases
CGTCAGGGCGACGCGGCGGCGCAGGGTGCCCTGGCGGCACAGCTGCGCCAGCGTTTTCCCGACTCGCGCGAATTGAGCGC
GTACGAACAAGGAGCATGGG

Downstream 100 bases:

>100_bases
CGCGGCTCGACACCGTGCATCATTGCGAGGTGGTAACGCTATGAACGAACAGCTTTGTCTTCCGGTCCTGCCGGGCCCGC
TGCCGCGCCGCGAAAGGCGC

Product: helix-hairpin-helix DNA-binding motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSEQERAAGQAASTGHVGGGATDSEREAVAREIGALLAQARESQRMSVEDVSARLKVAAPKLVAIESGNVEALPDITFAK
GVMRAYARMLHVDIDGLLARFHPRPVQVTEMARQREGGLNETFDDRRRFGKRGGGAGAGGRWVWLALVIAGLAAGGWFGL
DHMKQWLEARNSAAQAAPAEVQEPAGQGGEPGTVTAALPPVMAAADSPAPSEELPASAPAASGVAVPAQSAAATTAVPAV
ATTVTPVANTAPVAATPAAQGELQIKFSADTWYEIRDRNGKVVLGGTAKAGQEVAGGGTAPYKVTIGNVKGVESMSRNGT
PVDLKAANRNNVARLTLP

Sequences:

>Translated_338_residues
MSEQERAAGQAASTGHVGGGATDSEREAVAREIGALLAQARESQRMSVEDVSARLKVAAPKLVAIESGNVEALPDITFAK
GVMRAYARMLHVDIDGLLARFHPRPVQVTEMARQREGGLNETFDDRRRFGKRGGGAGAGGRWVWLALVIAGLAAGGWFGL
DHMKQWLEARNSAAQAAPAEVQEPAGQGGEPGTVTAALPPVMAAADSPAPSEELPASAPAASGVAVPAQSAAATTAVPAV
ATTVTPVANTAPVAATPAAQGELQIKFSADTWYEIRDRNGKVVLGGTAKAGQEVAGGGTAPYKVTIGNVKGVESMSRNGT
PVDLKAANRNNVARLTLP
>Mature_337_residues
SEQERAAGQAASTGHVGGGATDSEREAVAREIGALLAQARESQRMSVEDVSARLKVAAPKLVAIESGNVEALPDITFAKG
VMRAYARMLHVDIDGLLARFHPRPVQVTEMARQREGGLNETFDDRRRFGKRGGGAGAGGRWVWLALVIAGLAAGGWFGLD
HMKQWLEARNSAAQAAPAEVQEPAGQGGEPGTVTAALPPVMAAADSPAPSEELPASAPAASGVAVPAQSAAATTAVPAVA
TTVTPVANTAPVAATPAAQGELQIKFSADTWYEIRDRNGKVVLGGTAKAGQEVAGGGTAPYKVTIGNVKGVESMSRNGTP
VDLKAANRNNVARLTLP

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=338, Percent_Identity=28.9940828402367, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 34676; Mature: 34545

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQERAAGQAASTGHVGGGATDSEREAVAREIGALLAQARESQRMSVEDVSARLKVAAP
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC
KLVAIESGNVEALPDITFAKGVMRAYARMLHVDIDGLLARFHPRPVQVTEMARQREGGLN
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCCC
ETFDDRRRFGKRGGGAGAGGRWVWLALVIAGLAAGGWFGLDHMKQWLEARNSAAQAAPAE
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHH
VQEPAGQGGEPGTVTAALPPVMAAADSPAPSEELPASAPAASGVAVPAQSAAATTAVPAV
HHCCCCCCCCCCEEEEECCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
ATTVTPVANTAPVAATPAAQGELQIKFSADTWYEIRDRNGKVVLGGTAKAGQEVAGGGTA
HHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCHHCCCCCC
PYKVTIGNVKGVESMSRNGTPVDLKAANRNNVARLTLP
CEEEEECCCCCHHHHCCCCCCEEEEECCCCCEEEEECC
>Mature Secondary Structure 
SEQERAAGQAASTGHVGGGATDSEREAVAREIGALLAQARESQRMSVEDVSARLKVAAP
CCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC
KLVAIESGNVEALPDITFAKGVMRAYARMLHVDIDGLLARFHPRPVQVTEMARQREGGLN
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCCC
ETFDDRRRFGKRGGGAGAGGRWVWLALVIAGLAAGGWFGLDHMKQWLEARNSAAQAAPAE
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHH
VQEPAGQGGEPGTVTAALPPVMAAADSPAPSEELPASAPAASGVAVPAQSAAATTAVPAV
HHCCCCCCCCCCEEEEECCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
ATTVTPVANTAPVAATPAAQGELQIKFSADTWYEIRDRNGKVVLGGTAKAGQEVAGGGTA
HHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCHHCCCCCC
PYKVTIGNVKGVESMSRNGTPVDLKAANRNNVARLTLP
CEEEEECCCCCHHHHCCCCCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA