| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is metQ [H]
Identifier: 73541634
GI number: 73541634
Start: 2132457
End: 2133272
Strand: Direct
Name: metQ [H]
Synonym: Reut_A1945
Alternate gene names: 73541634
Gene position: 2132457-2133272 (Clockwise)
Preceding gene: 73541633
Following gene: 73541635
Centisome position: 56.02
GC content: 62.25
Gene sequence:
>816_bases ATGCGCAGCATCTCCCTTTACAAGCGTCTGGCGGTTGCCGTGTCCGCCGTAGGTTTCATTGCCGCCGCCGGCAACGCCTC GGCCCAGGAACAGACTATTCGCGTGGGTACCGTGAGCGGGCCGGACGCTGAAGTCTGGCAAGTCGTGCAGAAAGCGGCCA AGAAGAATGGCCTGAACGTGAAGGTCGTGGAATTTAACGACTACGTGCAGCCGAACGCCGCACTGGATGCCGGCGACCTC GACGCCAACAGCTTCCAGCACCAGCCTTACCTCGACAGCCAGATCAAGCAGCGCGGCTACAAGATGGTTAGCGTGGGCTA CACCTACATCTCGCCACTGGGCATCTACTCGAAGAACCTGAAGTCGCCGAAGGATCTGGCGCAGGGCGCCAAGGTTGCCG TGCCGAATGACCCGTCGAACGAGAACCGTGCCCTGCTGCTGCTCCAGGCACAGGGCGTGATCAAGCTCAAGGCCGGCGCA GGCACAAACGGCGCCAACGCGACCCCGCTGGACGTCGCCGAGAACCCGAAGAAACTGAAGATCGTGGAGCTGGACGCCGC CCAGCTTGCTCGCGCCCTGCCCGACGTCGGCGCCGCCGTCATCAACACCAACTACGCGCTGGCCGCCGGCCTCCAGCCGA CCAGGAATGCAATCGCCCTGGAAGACATCCACAGCCCGTACGCCAACATCATCGTCGTTCGCACGCAGGACAAGGACAAG CCGTGGGTGAAGAAGCTGGTGGCGGCTTATCAGTCGGAAGACGTCAAGCAGTTCATGAAGACCCAGTTCAAGGGCGCGAT GGTCCCTTCGTTCTGA
Upstream 100 bases:
>100_bases CGCAATTGCGTTAATCTTTGGCCTCGCCCGCCCCACCCTACACGGACCGGGGCCAGGCGCCTTTCAAGCCACAAGCTTCC AATAACATCCAAACTCTCCT
Downstream 100 bases:
>100_bases TGGAACGACGGAGTGATGTCCTGATGGACTGATAGCCATACGGGACCGGATCAAGCATCGAACATCATGATCCGGTCCCG TACGCCACGGCAAATCCCCC
Product: lipoprotein YaeC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRSISLYKRLAVAVSAVGFIAAAGNASAQEQTIRVGTVSGPDAEVWQVVQKAAKKNGLNVKVVEFNDYVQPNAALDAGDL DANSFQHQPYLDSQIKQRGYKMVSVGYTYISPLGIYSKNLKSPKDLAQGAKVAVPNDPSNENRALLLLQAQGVIKLKAGA GTNGANATPLDVAENPKKLKIVELDAAQLARALPDVGAAVINTNYALAAGLQPTRNAIALEDIHSPYANIIVVRTQDKDK PWVKKLVAAYQSEDVKQFMKTQFKGAMVPSF
Sequences:
>Translated_271_residues MRSISLYKRLAVAVSAVGFIAAAGNASAQEQTIRVGTVSGPDAEVWQVVQKAAKKNGLNVKVVEFNDYVQPNAALDAGDL DANSFQHQPYLDSQIKQRGYKMVSVGYTYISPLGIYSKNLKSPKDLAQGAKVAVPNDPSNENRALLLLQAQGVIKLKAGA GTNGANATPLDVAENPKKLKIVELDAAQLARALPDVGAAVINTNYALAAGLQPTRNAIALEDIHSPYANIIVVRTQDKDK PWVKKLVAAYQSEDVKQFMKTQFKGAMVPSF >Mature_271_residues MRSISLYKRLAVAVSAVGFIAAAGNASAQEQTIRVGTVSGPDAEVWQVVQKAAKKNGLNVKVVEFNDYVQPNAALDAGDL DANSFQHQPYLDSQIKQRGYKMVSVGYTYISPLGIYSKNLKSPKDLAQGAKVAVPNDPSNENRALLLLQAQGVIKLKAGA GTNGANATPLDVAENPKKLKIVELDAAQLARALPDVGAAVINTNYALAAGLQPTRNAIALEDIHSPYANIIVVRTQDKDK PWVKKLVAAYQSEDVKQFMKTQFKGAMVPSF
Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=270, Percent_Identity=49.6296296296296, Blast_Score=242, Evalue=2e-65, Organism=Escherichia coli, GI1790093, Length=249, Percent_Identity=42.570281124498, Blast_Score=202, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 - InterPro: IPR004478 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 29047; Mature: 29047
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSISLYKRLAVAVSAVGFIAAAGNASAQEQTIRVGTVSGPDAEVWQVVQKAAKKNGLNV CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEE KVVEFNDYVQPNAALDAGDLDANSFQHQPYLDSQIKQRGYKMVSVGYTYISPLGIYSKNL EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHCCHHHHHHCC KSPKDLAQGAKVAVPNDPSNENRALLLLQAQGVIKLKAGAGTNGANATPLDVAENPKKLK CCHHHHHCCCEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEE IVELDAAQLARALPDVGAAVINTNYALAAGLQPTRNAIALEDIHSPYANIIVVRTQDKDK EEEECHHHHHHHCCCCCCEEEECCEEEEECCCCCCCEEEHHHHCCCCCCEEEEEECCCCC PWVKKLVAAYQSEDVKQFMKTQFKGAMVPSF HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRSISLYKRLAVAVSAVGFIAAAGNASAQEQTIRVGTVSGPDAEVWQVVQKAAKKNGLNV CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEE KVVEFNDYVQPNAALDAGDLDANSFQHQPYLDSQIKQRGYKMVSVGYTYISPLGIYSKNL EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHCCHHHHHHCC KSPKDLAQGAKVAVPNDPSNENRALLLLQAQGVIKLKAGAGTNGANATPLDVAENPKKLK CCHHHHHCCCEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEE IVELDAAQLARALPDVGAAVINTNYALAAGLQPTRNAIALEDIHSPYANIIVVRTQDKDK EEEECHHHHHHHCCCCCCEEEECCEEEEECCCCCCCEEEHHHHCCCCCCEEEEEECCCCC PWVKKLVAAYQSEDVKQFMKTQFKGAMVPSF HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]