| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is macA [H]
Identifier: 73541506
GI number: 73541506
Start: 1989351
End: 1990568
Strand: Direct
Name: macA [H]
Synonym: Reut_A1817
Alternate gene names: 73541506
Gene position: 1989351-1990568 (Clockwise)
Preceding gene: 73541505
Following gene: 73541507
Centisome position: 52.26
GC content: 68.97
Gene sequence:
>1218_bases ATGACACTGCCCACACTGCGGGAAACCGCTGACAATGCACCGCCTGAAACTGCCTGCCCGCCACCTGCCGAGCGCGGGAG GGGGCGCCTCATTCTGGCTGCCGCGGCCGTCCTCGCCTGTGCGCTGGCCGCCGGGATCGTCCCCAGGCTGCACGCGCACG CTGCACTGGCCCAGCGCACCGCGCAGACGATGGTGCCGGCCGTCAGGATCGTGCGCCCCGGGCATGCGGCGGCGATGCGC GAAATCGTCCTGCCCGGAGATGTGCGGGCCTATCAGGATGCAGCGGTCTATGCGCGCGTCAACGGCTATTTGCGACGCTG GTATGCGGACCTCGGTACGCCGGTGAAGAAGGGCCAGTTGCTGGCCGAGATCGACGCGCCGGAAGTGGCTGACCAGTTGC GCCAGGCACGCGCCGACGAAGCGACCGCCGCCGCCAACTACGCGCTGGCGCGGAGCACTGCGGACCGCTGGAAGGACCTG CAGGCGTCCAACTCCGTCGCGCAGCAAGAGACCGACCAGAAGATCGCCGACATGCAGGCCAAGGCTGCCGTACTGGCATC GGCGCGCTCGAATACGTCGCGCCTCGCGCAACTTGCGTCCTACACGGAGATTCGCGCGCCATTCGACGGGGTGATTACCG CCAGGAATGTCGATACCGGTGCCTTGGTCGATGCCGGCAGCGCCCCCGGCCAGGGCCGTGAACTGTTCCACATCTCGGCG GGCGGCACGCTGCGGGTCTACATACAGCTTCCCCAGGACGCCAGTGCGATGGTGGGCCCGGACATGCAGGCATGGCTGAC GCTGCCGCAATCGCCAGGCGAGCGGTTTGCCGCCACGGTGACGCGCAATGCCGGTGCCTTCGATGCCGCCACGCGCAGCC TGCGGGTCGAACTCGAGGTCGACAGCCACGGCGGCCGCATCCTGCCGGGCGCCTATGCGGAGGTGCACCTGAGCACGAAT GCGGACACTGCTGGCTTCGACCTGCCGGCCAGCACGCTGGCGTTCCGCCCCGCAGGTCCGAGCGTCGCCGTGGTCGGCAA GGATGGGCGCGTGGAACTTCGCAACATCACGCTTGGCCGTGACTTCGGTACCCACGTGGAAGTGCTGGGCGGGCTGCAAG GCACGGAGCAGGTCATCGTCAACCCGGGTGACGGCCTGATGGCTGGCACCCCGGTACGTGTCGTTGCCGACCAGGCCGGT GCGGCCCGGTCGTCCTGA
Upstream 100 bases:
>100_bases TGGTCCCGGTCTTCTTCGCGATGCTCCACACCTGGCTCGGCACGCGGTCCGCTGCAACGCCCGCGCATTCGGCACTTGGC TCTGATGAAAAAGGTCTGGT
Downstream 100 bases:
>100_bases TCGCTTTGCCATCCCATCATGCTCAACACGTCCGCGACGGAACACCGCAAAAAGCAGCCTGCCAGGCATGGAACACTCAG ACACCAGGCCGGGCGGGCAC
Product: secretion protein HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTLPTLRETADNAPPETACPPPAERGRGRLILAAAAVLACALAAGIVPRLHAHAALAQRTAQTMVPAVRIVRPGHAAAMR EIVLPGDVRAYQDAAVYARVNGYLRRWYADLGTPVKKGQLLAEIDAPEVADQLRQARADEATAAANYALARSTADRWKDL QASNSVAQQETDQKIADMQAKAAVLASARSNTSRLAQLASYTEIRAPFDGVITARNVDTGALVDAGSAPGQGRELFHISA GGTLRVYIQLPQDASAMVGPDMQAWLTLPQSPGERFAATVTRNAGAFDAATRSLRVELEVDSHGGRILPGAYAEVHLSTN ADTAGFDLPASTLAFRPAGPSVAVVGKDGRVELRNITLGRDFGTHVEVLGGLQGTEQVIVNPGDGLMAGTPVRVVADQAG AARSS
Sequences:
>Translated_405_residues MTLPTLRETADNAPPETACPPPAERGRGRLILAAAAVLACALAAGIVPRLHAHAALAQRTAQTMVPAVRIVRPGHAAAMR EIVLPGDVRAYQDAAVYARVNGYLRRWYADLGTPVKKGQLLAEIDAPEVADQLRQARADEATAAANYALARSTADRWKDL QASNSVAQQETDQKIADMQAKAAVLASARSNTSRLAQLASYTEIRAPFDGVITARNVDTGALVDAGSAPGQGRELFHISA GGTLRVYIQLPQDASAMVGPDMQAWLTLPQSPGERFAATVTRNAGAFDAATRSLRVELEVDSHGGRILPGAYAEVHLSTN ADTAGFDLPASTLAFRPAGPSVAVVGKDGRVELRNITLGRDFGTHVEVLGGLQGTEQVIVNPGDGLMAGTPVRVVADQAG AARSS >Mature_404_residues TLPTLRETADNAPPETACPPPAERGRGRLILAAAAVLACALAAGIVPRLHAHAALAQRTAQTMVPAVRIVRPGHAAAMRE IVLPGDVRAYQDAAVYARVNGYLRRWYADLGTPVKKGQLLAEIDAPEVADQLRQARADEATAAANYALARSTADRWKDLQ ASNSVAQQETDQKIADMQAKAAVLASARSNTSRLAQLASYTEIRAPFDGVITARNVDTGALVDAGSAPGQGRELFHISAG GTLRVYIQLPQDASAMVGPDMQAWLTLPQSPGERFAATVTRNAGAFDAATRSLRVELEVDSHGGRILPGAYAEVHLSTNA DTAGFDLPASTLAFRPAGPSVAVVGKDGRVELRNITLGRDFGTHVEVLGGLQGTEQVIVNPGDGLMAGTPVRVVADQAGA ARSS
Specific function: Efflux transporter for macrolide antibiotics [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87081796, Length=335, Percent_Identity=25.6716417910448, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786668, Length=366, Percent_Identity=25.4098360655738, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87082036, Length=340, Percent_Identity=25, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1789929, Length=353, Percent_Identity=23.5127478753541, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789665, Length=393, Percent_Identity=26.2086513994911, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 42422; Mature: 42291
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPTLRETADNAPPETACPPPAERGRGRLILAAAAVLACALAAGIVPRLHAHAALAQRT CCCCCCHHHHCCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQTMVPAVRIVRPGHAAAMREIVLPGDVRAYQDAAVYARVNGYLRRWYADLGTPVKKGQL HHHHHHHHEEECCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LAEIDAPEVADQLRQARADEATAAANYALARSTADRWKDLQASNSVAQQETDQKIADMQA EEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KAAVLASARSNTSRLAQLASYTEIRAPFDGVITARNVDTGALVDAGSAPGQGRELFHISA HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCEEEEEEC GGTLRVYIQLPQDASAMVGPDMQAWLTLPQSPGERFAATVTRNAGAFDAATRSLRVELEV CCEEEEEEECCCCCCHHCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHCCEEEEEEEEE DSHGGRILPGAYAEVHLSTNADTAGFDLPASTLAFRPAGPSVAVVGKDGRVELRNITLGR CCCCCEECCCCEEEEEEECCCCCCCCCCCHHHEEECCCCCCEEEEECCCCEEEEEEEECC DFGTHVEVLGGLQGTEQVIVNPGDGLMAGTPVRVVADQAGAARSS CCCCHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure TLPTLRETADNAPPETACPPPAERGRGRLILAAAAVLACALAAGIVPRLHAHAALAQRT CCCCCHHHHCCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQTMVPAVRIVRPGHAAAMREIVLPGDVRAYQDAAVYARVNGYLRRWYADLGTPVKKGQL HHHHHHHHEEECCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LAEIDAPEVADQLRQARADEATAAANYALARSTADRWKDLQASNSVAQQETDQKIADMQA EEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KAAVLASARSNTSRLAQLASYTEIRAPFDGVITARNVDTGALVDAGSAPGQGRELFHISA HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCEEEEEEC GGTLRVYIQLPQDASAMVGPDMQAWLTLPQSPGERFAATVTRNAGAFDAATRSLRVELEV CCEEEEEEECCCCCCHHCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHCCEEEEEEEEE DSHGGRILPGAYAEVHLSTNADTAGFDLPASTLAFRPAGPSVAVVGKDGRVELRNITLGR CCCCCEECCCCEEEEEEECCCCCCCCCCCHHHEEECCCCCCEEEEECCCCEEEEEEEECC DFGTHVEVLGGLQGTEQVIVNPGDGLMAGTPVRVVADQAGAARSS CCCCHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]