Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

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The map label for this gene is 73541289

Identifier: 73541289

GI number: 73541289

Start: 1721550

End: 1722710

Strand: Direct

Name: 73541289

Synonym: Reut_A1599

Alternate gene names: NA

Gene position: 1721550-1722710 (Clockwise)

Preceding gene: 73541288

Following gene: 73541292

Centisome position: 45.23

GC content: 61.33

Gene sequence:

>1161_bases
GTGAAAAGAAAGATTCTTGCCCTGGCTGCTGTCAGTGCGTGTGGGGCAGCGAGCGCGCAATCCGGCGTGACCTTGTATGG
TGTGGCGGATATCAACGTAGAGTACGTCAACCGCGTCGGCGCCGCCGTGCCGTCGGCCGCCAACGGCTTCCAGTCGGGTG
CCGGCCATAGCGTCGTCCGCGAGAATTCCGGCGGGTACTCCGGCTCGCGTTGGGGGCTTCGCGGCACGGAGGATCTGGGC
GCCGGAATGAAGTCCATCTTCGTCCTGGAAAGCGGCTTCAATCTCGATAGTGGCGCGTCGCAGCAGGGCGGGCGTTTGTT
TGGTCGCCAGGCCTTTGTGGGTCTTAGCTCCGAATATGGTCAGCTCACCTTCGGCCGGCAATACCATTCGATGTTCTCGA
CGCTGGCCAACTTCATTCCGGCCCGATATGCGACCCAGTATGAACCCGTGGGCGTGATCGCCGGTGCGAATTTCCGCGAG
GACAATGCGCTGAAGTACGTCGGCGTGTTCGGCGGCCTCACGGCACAGGCCAACATGTCGTTCGGCGTCGGGACGACACT
GCCGCAAGTCATCGCAAGCGTTCCGGCCGCCGGCGGCAATGGCGAGGTGCCGGGGCAGTATCGCCGCGACACGGCCTATG
GTGTTGGCTTGAGCTATCTCGCCGGGCCGTTCGGGGTAGGCGTTGCCTACGATCAATGGAATCCGACGATCGGCACTGGC
AGCGGTACCTTCAAGAAGGCCGCGGTCATGGGCAGCTACGCTTTCAACGCCACGGCGAAAGTCATGGGCGGTTATCGCTG
GGGCCAGAACAAGAACCAGAATGGCGGCCTGACCATGCGTGACGACTTCTATTGGGTCGGCGGTCAGTACCGGTTCTCTT
CTGCACTCGACTTCACGCTCGAGTATGACTATCAGAACGTGAAGAGCCTCGGCGGCAATACGCACGTTGCCAATCCCTGG
CAGGTTGCGCTGATTGCCGACTACACGCTCTCGAAGCGGACAGATATCTATCTGACCATGGCCTATGCCAAGAACGCCGG
CCTGGCGATGGAATCGGCAGCGAGCAACTATGCCACCAGCCTGACAGTCAACAACTACGCGCTGTCCAATGGCCAGAGCT
CGATGTTTGGCGCCGCTGTGGGTATCCGCCACGTGTTCTGA

Upstream 100 bases:

>100_bases
GGGAAATCGACCCTCGATTCGCCCCCTCAAACGCTTCGACCTCTTGGCATTCGCGCGCCACCGGGTTGAAGACGACAACA
ATGAACGTGGAGGAGTTCTG

Downstream 100 bases:

>100_bases
AGGCGGCTCTGAAGAGCCTTCTGCATGAGTCTCCACCGGAAATGCCGATCTTCAGCCAGCCTGGCACTTTCCTCGGCACT
TCCGGCTTCAAAGGTTCGAC

Product: putative outer membrane porin signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVRENSGGYSGSRWGLRGTEDLG
AGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYGQLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFRE
DNALKYVGVFGGLTAQANMSFGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG
SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTLEYDYQNVKSLGGNTHVANPW
QVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATSLTVNNYALSNGQSSMFGAAVGIRHVF

Sequences:

>Translated_386_residues
MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVRENSGGYSGSRWGLRGTEDLG
AGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYGQLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFRE
DNALKYVGVFGGLTAQANMSFGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG
SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTLEYDYQNVKSLGGNTHVANPW
QVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATSLTVNNYALSNGQSSMFGAAVGIRHVF
>Mature_386_residues
MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVRENSGGYSGSRWGLRGTEDLG
AGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYGQLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFRE
DNALKYVGVFGGLTAQANMSFGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG
SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTLEYDYQNVKSLGGNTHVANPW
QVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATSLTVNNYALSNGQSSMFGAAVGIRHVF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40682; Mature: 40682

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVR
CCCEEEEEEHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEE
ENSGGYSGSRWGLRGTEDLGAGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYG
CCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCC
QLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFREDNALKYVGVFGGLTAQANMS
CEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEECCCC
FGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCEEECCCCCCEECC
SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTL
CCCHHHHHEEECHHHCCHHHHHCCEECCCCCCCCCCEEEECCEEEECCEEEECCEEEEEE
EYDYQNVKSLGGNTHVANPWQVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATS
EECCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEHHCCCCCEEE
LTVNNYALSNGQSSMFGAAVGIRHVF
EEEECEEECCCCCHHHHHHHHHEECC
>Mature Secondary Structure
MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVR
CCCEEEEEEHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEE
ENSGGYSGSRWGLRGTEDLGAGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYG
CCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCC
QLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFREDNALKYVGVFGGLTAQANMS
CEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEECCCC
FGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCEEECCCCCCEECC
SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTL
CCCHHHHHEEECHHHCCHHHHHCCEECCCCCCCCCCEEEECCEEEECCEEEECCEEEEEE
EYDYQNVKSLGGNTHVANPWQVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATS
EECCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEHHCCCCCEEE
LTVNNYALSNGQSSMFGAAVGIRHVF
EEEECEEECCCCCHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]