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The map label for this gene is tex [H]

Identifier: 73541033

GI number: 73541033

Start: 1437962

End: 1440370

Strand: Reverse

Name: tex [H]

Synonym: Reut_A1339

Alternate gene names: 73541033

Gene position: 1440370-1437962 (Counterclockwise)

Preceding gene: 73541037

Following gene: 73541030

Centisome position: 37.84

GC content: 65.55

Gene sequence:

>2409_bases
TTGTGGCAAAATGCCCCGCTTTCGACTGACCGCTTTCGACAGACCGATTTCCCGATGTCCAATCTGCCCGCATCCGTTTC
GCAAAAGATTGTGTCGCTCATCGCGGCTGAACTCACCGTTCAACCCCGCCAGGTAGCGGCGGCCGTGGAACTGCTCGACG
AAGGCTCGACCGTGCCCTTCATCGCCCGTTACCGCAAGGAAGTCACGGGCAACCTGGACGACACCCAGCTCCGTACGCTG
GAAGAGCGCCTGCTGTACCTGCGCGACATGGAAGACCGGCGCCTGGCGATCCTTGCCTCGATCGAAGAGCAAGGCAAGCT
GACGCCGGAACTGCGCACAGCCATTGAAGGCGCCCAGACCAAGCAGACGCTGGAAGACCTGTACCTGCCCTACAAGCCCA
AGCGCCGCACGCGCGCGCAGATCGCACGCGAATGCGGGCTGGAGCCGCTGGCCCAGGCACTGCTGGCCGACCCCACGCTA
GACCCGCAGGCCGAAGCTGCCAAGTACGTCAACGGAAATCCGACCGCCGACGGCGGCGTGCCCGACGTCAAGGCTGCGCT
GGATGGCGCGCGCGACATCCTTTCCGAGCAGTTCGGCGAAACCGCGGAACTGCTGGGCAAGCTGCGCGAACACTTGTGGA
GCAACGGCGTCGTCAGCTCCACGGTGATGGAGGGCAAGGAAACCGCCGAGGAAGAGAAGTTCCGCGACTACTACCAGTAC
AGCGAAACCATCCGCACCGTGCCGTCGCACCGCGCACTGGCGCTGTTCCGTGGCCGCAATGCGGGCGTGCTGATGGTCAA
GCTGGGCCTGGGCGAAGAACAGGATGCGCTGGTGCCGCACCCGTGCGAAGGCATGATTGCGCGCCACGTGGGCATCCAGA
ATCAGGGCCGCCCCGCCGACAAGTGGCTCGGCGACGTGTGCCGCTGGTGCTGGCGCGTCAAGGTGCAGCCGCATCTGGAA
ACCGAACTGCTGACCCAGTTGCGCGAAACCGCCGAAGGCGAAGCCATCAAGGTGTTCGGCCGCAACCTGCACGAACTGCT
GCTCGCCGCGCCGGCCGGTCCCAAGGCGGTGATGGGCGTCGACCCCGGCATCCGCACCGGCTGCAAGATCGCTGTGGTGG
ACACCACCGGCAAGCTGCTCGAAACCGCGACCATCTACCCGCATGAGCCGCGCCGCGACTGGAACGGCTCGCTGGCCACG
CTCGCGCGCATGGCCAAGCAGCATGGCGTGGCGCTGGTCTCGATCGGCAACGGCACGGCCAGCCGCGAAACCGACAAGCT
GGTGCAGGACCTGATGCGCCAGGCGCCCGACCTCAAGCTGACCAAGATCGTCGTCAGCGAGGCCGGCGCATCGGTGTACT
CCGCATCGGAACTGGCCGCGAAGGAATTCCCGGATCTCGACGTGTCGCTGCGCGGCGCCGTATCGATTGCGCGCCGCCTG
CAGGATCCGCTGGCCGAACTCGTGAAGATCGATCCGAAATCAATCGGCGTCGGCCAGTACCAGCATGACGTGAACCAACG
CGAGCTGGCCCGCACGCTCGATGCCGTGGTCGAGGACTGCGTGAACGCCGTGGGCGTCGATGTGAACACCGCCTCGGCCC
CGCTGCTGGCGCGTGTGTCAGGCCTGAACACCGTGCTGGCGCGCAATATCGTCGAGTACCGCGACGCCAACGGTGCCTTC
ACCAATCGCGAAGCGCTGAAGAAGGTGCCGCGCCTCGGCGACAAGACCTTCGAGCAGGCCGCCGGCTTCCTGCGCGTCAA
CAACGGCGACAACCCGCTGGATCGCTCGTCGGTGCACCCGGAGGCCTATCCGGTGGTCAAGCGCATCCTGGACCATATCA
AGAAGGGCCTGTCGGACGTCATGGGCAACCGCGAGGCCCTGCGCGGCGTGTCGCCGGCGCAGTTCACCGACGAATCGTTC
GGCCTGCCGACCGTGCGCGACATCCTCACCGAACTCGAAAAACCGGGCCGTGACCCGCGCCCCGAGTTCAAGACCGCGAC
CTTCCAGGAAGGCGTCGAAGACGTGAAGGATTTGCAACCGGGCATGATCCTGGAAGGCGTGGTCACCAACGTGGCGGCCT
TTGGCGCATTCGTGGACATCGGCGTGCACCAGGACGGTCTCGTGCATATCTCGGCGTTGTCGAACAAATTCGTCAAGGAT
GCGCACGAGGTGGTCAAGGCTGGCCAGATCGTCAAGGTCAAGGTGATGGAGGTGGACGTCATGCGCAATCGCATCGGGCT
GAGCATGCGGCTGGATGACGAGCCCGGACAGACCTCGTCGCGACCGTCGTCGGGTGACCGTGGTGGCCAGCGGCCCGGCG
GTGGCAAGAGCTTCGGCAATGGCGGCAACCGCCGCGAAGCAGAACCAGCCGGCGCCATGGCGGCGGCATTCGCCAAGCTC
AAGCGCTAA

Upstream 100 bases:

>100_bases
TAGCATCCGGCCTGCCACGCGCCTTGGCGGCCAGTGCGGCGGCGTCTCGCGGGATACACAGACTGAATCAGGCCTACTTC
CGTGGGGGATATCCGCCAGC

Downstream 100 bases:

>100_bases
GCTGCCTGGCCAATACTGTTGTTGAAGGACGCCCCGCGCGGCTGCTGCCGCCCGGGGCGTTTTTTATGACTGCCCGGCAC
AACGGAAGATGCGAACCATC

Product: RNA binding S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 802; Mature: 802

Protein sequence:

>802_residues
MWQNAPLSTDRFRQTDFPMSNLPASVSQKIVSLIAAELTVQPRQVAAAVELLDEGSTVPFIARYRKEVTGNLDDTQLRTL
EERLLYLRDMEDRRLAILASIEEQGKLTPELRTAIEGAQTKQTLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTL
DPQAEAAKYVNGNPTADGGVPDVKAALDGARDILSEQFGETAELLGKLREHLWSNGVVSSTVMEGKETAEEEKFRDYYQY
SETIRTVPSHRALALFRGRNAGVLMVKLGLGEEQDALVPHPCEGMIARHVGIQNQGRPADKWLGDVCRWCWRVKVQPHLE
TELLTQLRETAEGEAIKVFGRNLHELLLAAPAGPKAVMGVDPGIRTGCKIAVVDTTGKLLETATIYPHEPRRDWNGSLAT
LARMAKQHGVALVSIGNGTASRETDKLVQDLMRQAPDLKLTKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRL
QDPLAELVKIDPKSIGVGQYQHDVNQRELARTLDAVVEDCVNAVGVDVNTASAPLLARVSGLNTVLARNIVEYRDANGAF
TNREALKKVPRLGDKTFEQAAGFLRVNNGDNPLDRSSVHPEAYPVVKRILDHIKKGLSDVMGNREALRGVSPAQFTDESF
GLPTVRDILTELEKPGRDPRPEFKTATFQEGVEDVKDLQPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNKFVKD
AHEVVKAGQIVKVKVMEVDVMRNRIGLSMRLDDEPGQTSSRPSSGDRGGQRPGGGKSFGNGGNRREAEPAGAMAAAFAKL
KR

Sequences:

>Translated_802_residues
MWQNAPLSTDRFRQTDFPMSNLPASVSQKIVSLIAAELTVQPRQVAAAVELLDEGSTVPFIARYRKEVTGNLDDTQLRTL
EERLLYLRDMEDRRLAILASIEEQGKLTPELRTAIEGAQTKQTLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTL
DPQAEAAKYVNGNPTADGGVPDVKAALDGARDILSEQFGETAELLGKLREHLWSNGVVSSTVMEGKETAEEEKFRDYYQY
SETIRTVPSHRALALFRGRNAGVLMVKLGLGEEQDALVPHPCEGMIARHVGIQNQGRPADKWLGDVCRWCWRVKVQPHLE
TELLTQLRETAEGEAIKVFGRNLHELLLAAPAGPKAVMGVDPGIRTGCKIAVVDTTGKLLETATIYPHEPRRDWNGSLAT
LARMAKQHGVALVSIGNGTASRETDKLVQDLMRQAPDLKLTKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRL
QDPLAELVKIDPKSIGVGQYQHDVNQRELARTLDAVVEDCVNAVGVDVNTASAPLLARVSGLNTVLARNIVEYRDANGAF
TNREALKKVPRLGDKTFEQAAGFLRVNNGDNPLDRSSVHPEAYPVVKRILDHIKKGLSDVMGNREALRGVSPAQFTDESF
GLPTVRDILTELEKPGRDPRPEFKTATFQEGVEDVKDLQPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNKFVKD
AHEVVKAGQIVKVKVMEVDVMRNRIGLSMRLDDEPGQTSSRPSSGDRGGQRPGGGKSFGNGGNRREAEPAGAMAAAFAKL
KR
>Mature_802_residues
MWQNAPLSTDRFRQTDFPMSNLPASVSQKIVSLIAAELTVQPRQVAAAVELLDEGSTVPFIARYRKEVTGNLDDTQLRTL
EERLLYLRDMEDRRLAILASIEEQGKLTPELRTAIEGAQTKQTLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTL
DPQAEAAKYVNGNPTADGGVPDVKAALDGARDILSEQFGETAELLGKLREHLWSNGVVSSTVMEGKETAEEEKFRDYYQY
SETIRTVPSHRALALFRGRNAGVLMVKLGLGEEQDALVPHPCEGMIARHVGIQNQGRPADKWLGDVCRWCWRVKVQPHLE
TELLTQLRETAEGEAIKVFGRNLHELLLAAPAGPKAVMGVDPGIRTGCKIAVVDTTGKLLETATIYPHEPRRDWNGSLAT
LARMAKQHGVALVSIGNGTASRETDKLVQDLMRQAPDLKLTKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRL
QDPLAELVKIDPKSIGVGQYQHDVNQRELARTLDAVVEDCVNAVGVDVNTASAPLLARVSGLNTVLARNIVEYRDANGAF
TNREALKKVPRLGDKTFEQAAGFLRVNNGDNPLDRSSVHPEAYPVVKRILDHIKKGLSDVMGNREALRGVSPAQFTDESF
GLPTVRDILTELEKPGRDPRPEFKTATFQEGVEDVKDLQPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNKFVKD
AHEVVKAGQIVKVKVMEVDVMRNRIGLSMRLDDEPGQTSSRPSSGDRGGQRPGGGKSFGNGGNRREAEPAGAMAAAFAKL
KR

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=801, Percent_Identity=33.832709113608, Blast_Score=398, Evalue=1e-110,
Organism=Homo sapiens, GI27597090, Length=565, Percent_Identity=23.3628318584071, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI87082262, Length=767, Percent_Identity=62.9726205997393, Blast_Score=942, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17511129, Length=720, Percent_Identity=28.6111111111111, Blast_Score=248, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17552892, Length=297, Percent_Identity=26.9360269360269, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI62484314, Length=774, Percent_Identity=31.3953488372093, Blast_Score=353, Evalue=2e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 87571; Mature: 87571

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQNAPLSTDRFRQTDFPMSNLPASVSQKIVSLIAAELTVQPRQVAAAVELLDEGSTVPF
CCCCCCCCHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHH
IARYRKEVTGNLDDTQLRTLEERLLYLRDMEDRRLAILASIEEQGKLTPELRTAIEGAQT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEHEEEHHHCCCCCHHHHHHHHHHHH
KQTLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTLDPQAEAAKYVNGNPTADGGV
HHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
PDVKAALDGARDILSEQFGETAELLGKLREHLWSNGVVSSTVMEGKETAEEEKFRDYYQY
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHH
SETIRTVPSHRALALFRGRNAGVLMVKLGLGEEQDALVPHPCEGMIARHVGIQNQGRPAD
HHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHH
KWLGDVCRWCWRVKVQPHLETELLTQLRETAEGEAIKVFGRNLHELLLAAPAGPKAVMGV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEC
DPGIRTGCKIAVVDTTGKLLETATIYPHEPRRDWNGSLATLARMAKQHGVALVSIGNGTA
CCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC
SRETDKLVQDLMRQAPDLKLTKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRL
CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QDPLAELVKIDPKSIGVGQYQHDVNQRELARTLDAVVEDCVNAVGVDVNTASAPLLARVS
HHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GLNTVLARNIVEYRDANGAFTNREALKKVPRLGDKTFEQAAGFLRVNNGDNPLDRSSVHP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCC
EAYPVVKRILDHIKKGLSDVMGNREALRGVSPAQFTDESFGLPTVRDILTELEKPGRDPR
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PEFKTATFQEGVEDVKDLQPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNKFVKD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHHH
AHEVVKAGQIVKVKVMEVDVMRNRIGLSMRLDDEPGQTSSRPSSGDRGGQRPGGGKSFGN
HHHHHHCCCEEEEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGNRREAEPAGAMAAAFAKLKR
CCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MWQNAPLSTDRFRQTDFPMSNLPASVSQKIVSLIAAELTVQPRQVAAAVELLDEGSTVPF
CCCCCCCCHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHH
IARYRKEVTGNLDDTQLRTLEERLLYLRDMEDRRLAILASIEEQGKLTPELRTAIEGAQT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEHEEEHHHCCCCCHHHHHHHHHHHH
KQTLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTLDPQAEAAKYVNGNPTADGGV
HHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
PDVKAALDGARDILSEQFGETAELLGKLREHLWSNGVVSSTVMEGKETAEEEKFRDYYQY
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHH
SETIRTVPSHRALALFRGRNAGVLMVKLGLGEEQDALVPHPCEGMIARHVGIQNQGRPAD
HHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHH
KWLGDVCRWCWRVKVQPHLETELLTQLRETAEGEAIKVFGRNLHELLLAAPAGPKAVMGV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEC
DPGIRTGCKIAVVDTTGKLLETATIYPHEPRRDWNGSLATLARMAKQHGVALVSIGNGTA
CCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC
SRETDKLVQDLMRQAPDLKLTKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRL
CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QDPLAELVKIDPKSIGVGQYQHDVNQRELARTLDAVVEDCVNAVGVDVNTASAPLLARVS
HHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GLNTVLARNIVEYRDANGAFTNREALKKVPRLGDKTFEQAAGFLRVNNGDNPLDRSSVHP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCC
EAYPVVKRILDHIKKGLSDVMGNREALRGVSPAQFTDESFGLPTVRDILTELEKPGRDPR
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PEFKTATFQEGVEDVKDLQPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNKFVKD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHHH
AHEVVKAGQIVKVKVMEVDVMRNRIGLSMRLDDEPGQTSSRPSSGDRGGQRPGGGKSFGN
HHHHHHCCCEEEEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGNRREAEPAGAMAAAFAKLKR
CCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]