Click here to switch to the map view.

The map label for this gene is comL [H]

Identifier: 73541037

GI number: 73541037

Start: 1443995

End: 1444810

Strand: Reverse

Name: comL [H]

Synonym: Reut_A1343

Alternate gene names: 73541037

Gene position: 1444810-1443995 (Counterclockwise)

Preceding gene: 73541040

Following gene: 73541033

Centisome position: 37.96

GC content: 63.48

Gene sequence:

>816_bases
ATGAAGCGCGCCAATTGGCGCGCGCGATTTGGAGCGATTCTGCTCGCAGGCGGCTGCGTCATGCTGTCGGCATGCGGCCT
GCTTGCTGACCAACCCGACGAGACCGCTGGCTGGTCGGCCAACAAATTATATTCGGAAGCCAAGGACGCCCTCGATGGCG
GCGACTATTCCCGTGCCGTGAAGCTGTATGAAAAGCTCGAAGGCCGCTATCCGTTCGGCCGCTACGCGCAGCAAGCCCAG
ATCGACACCGCCTACGCCAGCTACAAGGACGGCGAGACCGCAGCGGCACTGGCCGCGGTGGACCGCTTCATCCAGCTGCA
CCCGAGCCATCCCAATATCGATTACGCCTACTACCTCAAGGGCCTGATCAACTTCAACGACAACCTGGGCTGGCTGGGCC
GCTTCTCCGGCCAGGATCTCAGCGAGCGCGACCCGAAGGCGGCCCGCGCGGCGTACGACGCCTTCAACACGCTGGTCACG
CGCTTCCCCGACAGCAAGTACACGCCTGACGCCGCTGCGCGCATGCAGTACATCGTCAACTCGCTGGCCCAGCACGAAGT
CCATGCGGCGCGCTACTACTACAAGCGCGGCGCCTACCTGGCGGCGGTCAACCGCGCGCAGCAGGCACTCAAGGACTATG
ACGGCGCGCCCGCCAACGAGGAAGCGCTGTACATCATGATCCGCTCGTACGACTCGCTCGGCATGAAGGATCTGCGTGAC
GATACCGCCCGCGTGATGGAGCGCAACTTCCCGAACAGCGACTACATCAAGTACGGCGAGCGCCGCAAGGACAAGTCCTG
GTGGGAAGTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCACTCCCCCCACGCCGGATTCTGGCTGAGGGCTTGGGCTATAATGCTTGACGCTATTTTTCTTCATCCGGGATACGT
TGCCCATGCAATTGCTGAGC

Downstream 100 bases:

>100_bases
TCGGTAAGGACGCGGGGCACTGATTCCGCGGCTCATACAAAACGGGGCAGATCCGCAAGGATCTGCCCCGTTTCTCGTTG
TCCGGCCCGGATCGCGGACC

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKRANWRARFGAILLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYSRAVKLYEKLEGRYPFGRYAQQAQ
IDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLVT
RFPDSKYTPDAAARMQYIVNSLAQHEVHAARYYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRD
DTARVMERNFPNSDYIKYGERRKDKSWWEVF

Sequences:

>Translated_271_residues
MKRANWRARFGAILLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYSRAVKLYEKLEGRYPFGRYAQQAQ
IDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLVT
RFPDSKYTPDAAARMQYIVNSLAQHEVHAARYYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRD
DTARVMERNFPNSDYIKYGERRKDKSWWEVF
>Mature_271_residues
MKRANWRARFGAILLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYSRAVKLYEKLEGRYPFGRYAQQAQ
IDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLVT
RFPDSKYTPDAAARMQYIVNSLAQHEVHAARYYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRD
DTARVMERNFPNSDYIKYGERRKDKSWWEVF

Specific function: Required for efficient transformation of Neisseria gonorrhoeae by species-related DNA [H]

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=240, Percent_Identity=38.75, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30711; Mature: 30711

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRANWRARFGAILLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYSRAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
KLYEKLEGRYPFGRYAQQAQIDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLK
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
GLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLVTRFPDSKYTPDAAARMQYIVN
HHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SLAQHEVHAARYYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHH
DTARVMERNFPNSDYIKYGERRKDKSWWEVF
HHHHHHHCCCCCCHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MKRANWRARFGAILLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYSRAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
KLYEKLEGRYPFGRYAQQAQIDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLK
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
GLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLVTRFPDSKYTPDAAARMQYIVN
HHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SLAQHEVHAARYYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHH
DTARVMERNFPNSDYIKYGERRKDKSWWEVF
HHHHHHHCCCCCCHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8830266 [H]