| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is arnT [H]
Identifier: 73541030
GI number: 73541030
Start: 1433876
End: 1435636
Strand: Reverse
Name: arnT [H]
Synonym: Reut_A1336
Alternate gene names: 73541030
Gene position: 1435636-1433876 (Counterclockwise)
Preceding gene: 73541033
Following gene: 73541029
Centisome position: 37.72
GC content: 64.74
Gene sequence:
>1761_bases ATGTTTCAAGGTTCCGATCGCCTGACGAAGCAGGAAGTGCTTGCCGCACAAGCCGCACAACCCTGGCACAGGCGCCGCTT CGGCGGCGTTCCGCTGATCGTGCTCGCCAGCGTCTGCGTGCTGATCGCGCTACTGTGGTTCGGCACGCTCGGTATGCGCC ACCTGATCGGCCCGGACGAAGGACGGTACGCCGAAATCGCGCGCGAGATGTTCGTGAGTGGCGACTGGGTGACCATTCGC TACAACGACCTGAAATACTTCGAAAAGCCGCCGTTTCACATGTGGGTGACGGCGCTGTCGTATTCGCTGTTCGGTATCGG TGAGTGGCAGGCGCGCTTGTGTGTCGCCCTGGCCGGCGCCATCGGCTTGCTGGCTTCGATGCTGGCTGCAAATCGCTGGT TTGGCGCCCGTGCAGCCCTGCTCACGGGCCTGGTGCTCGTCGCTGCGCCGATGTGGAGCGTGGCGGCGCACTTCAACACG CTGGACATGACACTTTCCGGCGCCATGGCCTGCGTGCTCGCATTCATGCTGCTGGCCCAGCACCCGCAGGCCAGCCCGGC CGCACGCCGCAACTGGATGCTGGCGTGCTGGGTCGCGATGGGCGTGGCGATCCTGACCAAGGGACTCGTAGGCATCGCCC TGCCCGGCCTGGTGCTGGTGATCTACACGCTCGTCAGCCGTGACTTTGCCCTGTGGCGCCGCCTGCATCTCGTGAGCGGC ATCGCGCTGATGCTACTGGTTGCCGTACCGTGGTTCTGGCTCGTGTCCGAACGCAATCCGGAATTCCTGCGCTTCTTCTT CATTCATGAGCACTGGGAGCGCTACACGTCGACCGTACATTCACGCAAGGGGCCCCTGCTCTATTTCGTACCGCTTGTGA TCGCCGGCTTCCTGCCCTGGCTGGGCCTGTTTCCGCGCATGTGGCAGGCGGTGCGCGAGCGCGCTGGCGTGGAACGCGGC ACCGCGGCGCGGCCCTTCCAGCCTGCACTGCTCGCTGCGGTCTGGGCGATTGTCATCTTCGTGTTCTTCAGCCTGTCGCG CTCGAAGCTGCCCGGCTATATCCTGCCAATCTTCCCGGCACTGGGCATCATTGCCGGCGCAGCCCTGGATACCATCTCCG AGCGCTCCTGGCGCAGGCAGTTGCTGGCTGGACTGGCCATTGGCGCCATCGGCCTGCTGGCCAGCCCCATCGTGGCGACG CTCAACTCCAACAACACGCCAAATGCGCTGTATCGGGCCTACGCCATCTGGGCCGCCGTGGCGTTCGCGATGATCATCGC CAGCACGCTGGTTGCGCGCTGGCTGCTGGAGCGGCGTGGTTTGCTCGCAAGCATCACGGTCTACGCACTCGGCATGTGCA CAGCGTTCACGGCCGCGCTGCTGGGCCATGAAGTCATCGGCCGCTCCGCATCGGGCATCGACATGATTCAGCCGCTTGCA CGCGTACTTCGCCCCGATATGAAGTTCTATGGCGTGCGTGTGCTAGACCATACGCTGCCGTTCTATCTGCGCCACCCGCT GGTCATGGTCGAACGCCCCGACGAACTCGAGTTCGGCGTTACCCAGGAGCCGCAGAAATGGCTGCCGACCACCGCGGCGT TCCTGTCAGAGTGGCAGGACGGCAAGCCCGCCCTGGCAATCATGTCGCCGCAGACGTTCGACGAGCTCAGCCAGCACGCG CCCATGTACGTGGTGGCGCGGGACTGGCGCCGTGTAGCCGTTACCAACTTCGCCGTGAATCCTCCGGCACCGCAGCGCTG A
Upstream 100 bases:
>100_bases CCTGAACGAGCCGCCGTCCCGCCGTTCACGCGACACTGTTTGCCGCACGGCACCGCCCGGTTTCCGGCCCCCGATCCGCC ACGCCAGCCCCCTTTTTTTG
Downstream 100 bases:
>100_bases AGCACCAAGCGCCCGGCACCCCTTACGCTTAACCCATGCAACAACCCAATTCCATGCAAGGCAAGAAAGTCCTCATCCTC GGCGTCAACGGCTTCATCGG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MFQGSDRLTKQEVLAAQAAQPWHRRRFGGVPLIVLASVCVLIALLWFGTLGMRHLIGPDEGRYAEIAREMFVSGDWVTIR YNDLKYFEKPPFHMWVTALSYSLFGIGEWQARLCVALAGAIGLLASMLAANRWFGARAALLTGLVLVAAPMWSVAAHFNT LDMTLSGAMACVLAFMLLAQHPQASPAARRNWMLACWVAMGVAILTKGLVGIALPGLVLVIYTLVSRDFALWRRLHLVSG IALMLLVAVPWFWLVSERNPEFLRFFFIHEHWERYTSTVHSRKGPLLYFVPLVIAGFLPWLGLFPRMWQAVRERAGVERG TAARPFQPALLAAVWAIVIFVFFSLSRSKLPGYILPIFPALGIIAGAALDTISERSWRRQLLAGLAIGAIGLLASPIVAT LNSNNTPNALYRAYAIWAAVAFAMIIASTLVARWLLERRGLLASITVYALGMCTAFTAALLGHEVIGRSASGIDMIQPLA RVLRPDMKFYGVRVLDHTLPFYLRHPLVMVERPDELEFGVTQEPQKWLPTTAAFLSEWQDGKPALAIMSPQTFDELSQHA PMYVVARDWRRVAVTNFAVNPPAPQR
Sequences:
>Translated_586_residues MFQGSDRLTKQEVLAAQAAQPWHRRRFGGVPLIVLASVCVLIALLWFGTLGMRHLIGPDEGRYAEIAREMFVSGDWVTIR YNDLKYFEKPPFHMWVTALSYSLFGIGEWQARLCVALAGAIGLLASMLAANRWFGARAALLTGLVLVAAPMWSVAAHFNT LDMTLSGAMACVLAFMLLAQHPQASPAARRNWMLACWVAMGVAILTKGLVGIALPGLVLVIYTLVSRDFALWRRLHLVSG IALMLLVAVPWFWLVSERNPEFLRFFFIHEHWERYTSTVHSRKGPLLYFVPLVIAGFLPWLGLFPRMWQAVRERAGVERG TAARPFQPALLAAVWAIVIFVFFSLSRSKLPGYILPIFPALGIIAGAALDTISERSWRRQLLAGLAIGAIGLLASPIVAT LNSNNTPNALYRAYAIWAAVAFAMIIASTLVARWLLERRGLLASITVYALGMCTAFTAALLGHEVIGRSASGIDMIQPLA RVLRPDMKFYGVRVLDHTLPFYLRHPLVMVERPDELEFGVTQEPQKWLPTTAAFLSEWQDGKPALAIMSPQTFDELSQHA PMYVVARDWRRVAVTNFAVNPPAPQR >Mature_586_residues MFQGSDRLTKQEVLAAQAAQPWHRRRFGGVPLIVLASVCVLIALLWFGTLGMRHLIGPDEGRYAEIAREMFVSGDWVTIR YNDLKYFEKPPFHMWVTALSYSLFGIGEWQARLCVALAGAIGLLASMLAANRWFGARAALLTGLVLVAAPMWSVAAHFNT LDMTLSGAMACVLAFMLLAQHPQASPAARRNWMLACWVAMGVAILTKGLVGIALPGLVLVIYTLVSRDFALWRRLHLVSG IALMLLVAVPWFWLVSERNPEFLRFFFIHEHWERYTSTVHSRKGPLLYFVPLVIAGFLPWLGLFPRMWQAVRERAGVERG TAARPFQPALLAAVWAIVIFVFFSLSRSKLPGYILPIFPALGIIAGAALDTISERSWRRQLLAGLAIGAIGLLASPIVAT LNSNNTPNALYRAYAIWAAVAFAMIIASTLVARWLLERRGLLASITVYALGMCTAFTAALLGHEVIGRSASGIDMIQPLA RVLRPDMKFYGVRVLDHTLPFYLRHPLVMVERPDELEFGVTQEPQKWLPTTAAFLSEWQDGKPALAIMSPQTFDELSQHA PMYVVARDWRRVAVTNFAVNPPAPQR
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=379, Percent_Identity=28.2321899736148, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 65154; Mature: 65154
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQGSDRLTKQEVLAAQAAQPWHRRRFGGVPLIVLASVCVLIALLWFGTLGMRHLIGPDE CCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GRYAEIAREMFVSGDWVTIRYNDLKYFEKPPFHMWVTALSYSLFGIGEWQARLCVALAGA CHHHHHHHHHHHCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IGLLASMLAANRWFGARAALLTGLVLVAAPMWSVAAHFNTLDMTLSGAMACVLAFMLLAQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPQASPAARRNWMLACWVAMGVAILTKGLVGIALPGLVLVIYTLVSRDFALWRRLHLVSG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALMLLVAVPWFWLVSERNPEFLRFFFIHEHWERYTSTVHSRKGPLLYFVPLVIAGFLPW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH LGLFPRMWQAVRERAGVERGTAARPFQPALLAAVWAIVIFVFFSLSRSKLPGYILPIFPA HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LGIIAGAALDTISERSWRRQLLAGLAIGAIGLLASPIVATLNSNNTPNALYRAYAIWAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AFAMIIASTLVARWLLERRGLLASITVYALGMCTAFTAALLGHEVIGRSASGIDMIQPLA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RVLRPDMKFYGVRVLDHTLPFYLRHPLVMVERPDELEFGVTQEPQKWLPTTAAFLSEWQD HHHCCCHHHHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCC GKPALAIMSPQTFDELSQHAPMYVVARDWRRVAVTNFAVNPPAPQR CCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHEEEECCCCCCCC >Mature Secondary Structure MFQGSDRLTKQEVLAAQAAQPWHRRRFGGVPLIVLASVCVLIALLWFGTLGMRHLIGPDE CCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GRYAEIAREMFVSGDWVTIRYNDLKYFEKPPFHMWVTALSYSLFGIGEWQARLCVALAGA CHHHHHHHHHHHCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IGLLASMLAANRWFGARAALLTGLVLVAAPMWSVAAHFNTLDMTLSGAMACVLAFMLLAQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPQASPAARRNWMLACWVAMGVAILTKGLVGIALPGLVLVIYTLVSRDFALWRRLHLVSG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALMLLVAVPWFWLVSERNPEFLRFFFIHEHWERYTSTVHSRKGPLLYFVPLVIAGFLPW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH LGLFPRMWQAVRERAGVERGTAARPFQPALLAAVWAIVIFVFFSLSRSKLPGYILPIFPA HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LGIIAGAALDTISERSWRRQLLAGLAIGAIGLLASPIVATLNSNNTPNALYRAYAIWAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AFAMIIASTLVARWLLERRGLLASITVYALGMCTAFTAALLGHEVIGRSASGIDMIQPLA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RVLRPDMKFYGVRVLDHTLPFYLRHPLVMVERPDELEFGVTQEPQKWLPTTAAFLSEWQD HHHCCCHHHHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCC GKPALAIMSPQTFDELSQHAPMYVVARDWRRVAVTNFAVNPPAPQR CCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA