| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is thrS [H]
Identifier: 73540970
GI number: 73540970
Start: 1361019
End: 1362926
Strand: Direct
Name: thrS [H]
Synonym: Reut_A1275
Alternate gene names: 73540970
Gene position: 1361019-1362926 (Clockwise)
Preceding gene: 73540969
Following gene: 73540971
Centisome position: 35.75
GC content: 61.95
Gene sequence:
>1908_bases ATGATCGCAATCACGCTGCCGGATGGGTCCCGTCGCGAGTTTCCCGGCCCGGTGACGGTCGCCGAAGTGGCGCAAAGCAT CGGCACGGGTCTGGCCAAGGCCGCGCTGGCTGGCAAGGTGGACGGCAACCTGGTCGACACGAGCTACTCGATCGATCGCG ATGTGGCGCTGGCCATCATCACGGATAAGGACGCTGACGGCGTCGATGTCATTCGTCACTCCACGGCCCACTTGCTCGCG TATGCGGTCAAGGAACTGTACCCGGATGCCCAGGTGACGATCGGCCCCGTGATCGAAAACGGCTTCTATTACGACTTCGC CTACAAGCGTCCCTTCACGCCGGAAGACCTGGCTGCCATCGAAAAGAAGATGACGGAGCTGTCCCGCAAGGACGAGAAGG TCACGCGCGAGGTCTGGAACCGCGACGAGGCGGTGGCGCTGTTCGAGTCGATGGGCGAGAAGTACAAGGCCGAGATCATC GCCTCGATTCCGGCGGACCAGGAAATCGGTCTGTATCGCGAAGGCAAGTTCGTCGACCTGTGCCGTGGCCCGCACGTGCC GTCCACGGGCAAGCTCAAGGTCTTCAAGCTCATGAAGGTGGCCGGCGCCTACTGGCGCGGCGATGCCAACAACGAGATGC TCCAGCGCATCTACGGTACGGCGTGGGCCAAGAAGGAAGACCAGGAAGCCTACCTGCACATGCTCGAAGAGGCCGAAAAG CGCGATCACCGCAAACTGGGCAAGTCGCTCGACCTGTTCCACCTGCAGGAAGAGGCGCCGGGCATGGTGTTCTGGCACCC GAAGGGCTGGCAGGTATGGCAGGCCGTCGAGCAGTACATGCGCGGCCGCCTGACGGCCGCCGGCTATGACGAAGTGCGCA CGCCGCAGGTGATGGACCGTTCGCTGTGGGAGAAGTCCGGCCACTGGCAGAACTACAAGGAAAACATGTTCGTCACGGAG TCGGAGAAGCGCGACTACGCGATCAAGCCGATGAACTGCCCGGGACATGTGCAGATCTTCAACCATGGCCTGCGTTCCTA CCGTGACCTGCCGCTGCGCCTGGCCGAGTTCGGCGCCTGCCATCGCAACGAGCCGTCGGGCGCGCTGCATGGGCTGATGC GCGTGCGCGGTTTTGTGCAGGATGATGCGCACATCTTCTGCACGGAAGAGCAGATCGTTGCCGAGGCGAAAGCCTTCAAC GAACTCGCGTTCTCGGTCTATGACGACTTCGGCTTCAAGGATGTGGCGGTGAAGCTGTCGCTGCGTCCGGCACAGCGCGC TGGCTCGGACGAGGTCTGGGATCACGCCGAAGAAGGCCTGCGCCTGGCGCTGCGCGCCTGTGGCGTGGACTGGGAAGAAC TGCCCGGCGAGGGCGCATTCTACGGTCCGAAGGTCGAGTACCACATCAAAGATGCCATCGGCCGTTCATGGCAGTGCGGC ACGCTGCAGCTCGACCTGGTGCTGCCGGAGCGCCTCGGTGCCGAATACGTCGCCGAGGATAATTCGCGCAAGCGTCCGGT GATGCTGCACCGTGCGATCCTGGGTTCGTTCGAGCGTTTCCTTGGCATCCTGCTCGAAAACCACGCAGGTGCGCTGCCCG CCTGGCTGGCACCGGAGCAGGTGGTTGTCATGAATATCGCGGAATCGCAGGCTGAATATGCCGAAAATGTCGTGCAATCG CTGCTAAAACAAGGGTTTAGGGCGAAGGCCGATTTGCGTAACGAGAAAATTACGTATAAAATCCGCGAGCATTCGCTTCA GAAGATCCCCTACCTGCTGGTGGTGGGCGACAAGGAGCGGGATGCCAATCAAGTGGCCGTGCGTGCCCGTGGCAACGTGG ATCTGGGTGTGATGCCCGTCTCCGCGTTTGTGGAGCGTCTGCAACAGGACGTCACCAACAAAGCCTGA
Upstream 100 bases:
>100_bases TCGGTACGCCGCCTGTTTCGGGGTGGGCCGGTGCTACAAAAGATGCAGTTTGATCCGCCCGCCGAGCGCCAGCGCCGGGG TGGAATCCTGGAGAGTCGAA
Downstream 100 bases:
>100_bases TGGGTCGGAAGCACGGCTTGTTTTTTTGTCTTCTTGAGGTAACGCAACATCGCTACAGACAAAGGTCATCGCATCAACCG GGAGATCAGTGCGCCTGAGC
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MIAITLPDGSRREFPGPVTVAEVAQSIGTGLAKAALAGKVDGNLVDTSYSIDRDVALAIITDKDADGVDVIRHSTAHLLA YAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIEKKMTELSRKDEKVTREVWNRDEAVALFESMGEKYKAEII ASIPADQEIGLYREGKFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK RDHRKLGKSLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDRSLWEKSGHWQNYKENMFVTE SEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFN ELAFSVYDDFGFKDVAVKLSLRPAQRAGSDEVWDHAEEGLRLALRACGVDWEELPGEGAFYGPKVEYHIKDAIGRSWQCG TLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIAESQAEYAENVVQS LLKQGFRAKADLRNEKITYKIREHSLQKIPYLLVVGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQDVTNKA
Sequences:
>Translated_635_residues MIAITLPDGSRREFPGPVTVAEVAQSIGTGLAKAALAGKVDGNLVDTSYSIDRDVALAIITDKDADGVDVIRHSTAHLLA YAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIEKKMTELSRKDEKVTREVWNRDEAVALFESMGEKYKAEII ASIPADQEIGLYREGKFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK RDHRKLGKSLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDRSLWEKSGHWQNYKENMFVTE SEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFN ELAFSVYDDFGFKDVAVKLSLRPAQRAGSDEVWDHAEEGLRLALRACGVDWEELPGEGAFYGPKVEYHIKDAIGRSWQCG TLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIAESQAEYAENVVQS LLKQGFRAKADLRNEKITYKIREHSLQKIPYLLVVGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQDVTNKA >Mature_635_residues MIAITLPDGSRREFPGPVTVAEVAQSIGTGLAKAALAGKVDGNLVDTSYSIDRDVALAIITDKDADGVDVIRHSTAHLLA YAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIEKKMTELSRKDEKVTREVWNRDEAVALFESMGEKYKAEII ASIPADQEIGLYREGKFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK RDHRKLGKSLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDRSLWEKSGHWQNYKENMFVTE SEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFN ELAFSVYDDFGFKDVAVKLSLRPAQRAGSDEVWDHAEEGLRLALRACGVDWEELPGEGAFYGPKVEYHIKDAIGRSWQCG TLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIAESQAEYAENVVQS LLKQGFRAKADLRNEKITYKIREHSLQKIPYLLVVGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQDVTNKA
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=632, Percent_Identity=41.4556962025316, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI38570111, Length=614, Percent_Identity=41.042345276873, Blast_Score=478, Evalue=1e-134, Organism=Homo sapiens, GI20070344, Length=647, Percent_Identity=37.7125193199382, Blast_Score=413, Evalue=1e-115, Organism=Escherichia coli, GI1788013, Length=636, Percent_Identity=58.0188679245283, Blast_Score=782, Evalue=0.0, Organism=Escherichia coli, GI1786392, Length=140, Percent_Identity=31.4285714285714, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71984184, Length=634, Percent_Identity=39.1167192429022, Blast_Score=473, Evalue=1e-134, Organism=Caenorhabditis elegans, GI71984192, Length=634, Percent_Identity=39.1167192429022, Blast_Score=473, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6322112, Length=653, Percent_Identity=39.0505359877489, Blast_Score=469, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6322654, Length=447, Percent_Identity=36.0178970917226, Blast_Score=293, Evalue=4e-80, Organism=Drosophila melanogaster, GI24583842, Length=631, Percent_Identity=40.5705229793978, Blast_Score=494, Evalue=1e-140, Organism=Drosophila melanogaster, GI28574141, Length=631, Percent_Identity=40.5705229793978, Blast_Score=494, Evalue=1e-140, Organism=Drosophila melanogaster, GI24583839, Length=631, Percent_Identity=40.5705229793978, Blast_Score=494, Evalue=1e-139,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 71652; Mature: 71652
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAITLPDGSRREFPGPVTVAEVAQSIGTGLAKAALAGKVDGNLVDTSYSIDRDVALAII CEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAI ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHH EKKMTELSRKDEKVTREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGKFVDL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHEEEECCCCCCCCCEECCCEEEE CRGPHVPSTGKLKVFKLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RDHRKLGKSLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDR HHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH SLWEKSGHWQNYKENMFVTESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGAC HHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCC HRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFKDVAVKLS CCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE LRPAQRAGSDEVWDHAEEGLRLALRACGVDWEELPGEGAFYGPKVEYHIKDAIGRSWQCG ECCHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEHHHCCCCCCCC TLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQ EEEEEEECHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VVVMNIAESQAEYAENVVQSLLKQGFRAKADLRNEKITYKIREHSLQKIPYLLVVGDKER EEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEHHHHHHHCCEEEEECCCCC DANQVAVRARGNVDLGVMPVSAFVERLQQDVTNKA CCCEEEEEECCCCCEEEECHHHHHHHHHHHHCCCC >Mature Secondary Structure MIAITLPDGSRREFPGPVTVAEVAQSIGTGLAKAALAGKVDGNLVDTSYSIDRDVALAII CEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAI ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHH EKKMTELSRKDEKVTREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGKFVDL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHEEEECCCCCCCCCEECCCEEEE CRGPHVPSTGKLKVFKLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RDHRKLGKSLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDR HHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH SLWEKSGHWQNYKENMFVTESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGAC HHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCC HRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFKDVAVKLS CCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE LRPAQRAGSDEVWDHAEEGLRLALRACGVDWEELPGEGAFYGPKVEYHIKDAIGRSWQCG ECCHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEHHHCCCCCCCC TLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQ EEEEEEECHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VVVMNIAESQAEYAENVVQSLLKQGFRAKADLRNEKITYKIREHSLQKIPYLLVVGDKER EEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEHHHHHHHCCEEEEECCCCC DANQVAVRARGNVDLGVMPVSAFVERLQQDVTNKA CCCEEEEEECCCCCEEEECHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA