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The map label for this gene is ywhC [H]

Identifier: 73540804

GI number: 73540804

Start: 1195384

End: 1196049

Strand: Direct

Name: ywhC [H]

Synonym: Reut_A1102

Alternate gene names: 73540804

Gene position: 1195384-1196049 (Clockwise)

Preceding gene: 73540803

Following gene: 73540805

Centisome position: 31.4

GC content: 64.26

Gene sequence:

>666_bases
ATGGATTCCTCCCTCATTCAGACCTTTGCCGTCTATGCGCTGCCAGTGCTGTTCGCGATCACGCTGCACGAGGCGTCGCA
CGGCTATGTCGCCAAGCACTTCGGGGACACCACCGCTTATGCGCTGGGCCGCGTCAGCCTGAATCCGGCGCGGCATATTG
ACCCGATCGGCACCATTGCCGTGCCGCTGCTGCTGTATCTCCTGACCAGCGGCCAGTTCGTGTTCGGCTATGCCAAGCCG
GTCCCGGTGGATTTCGGGCGGCTGCGCAATCCGCGCTGGCATGGCATGTGGGTGGCGCTGGCTGGTCCCGTCAGCAATAT
CGTGCAGGCCTTCCTGTGGGCGCTGATCGCGATCGGGCTGGCCTGGGCGCGCGTGTCGGAGCCGTTCTTCAGCGAAATGG
CTCGCGCCGGTGTGCTGGTCAATCTGGTCGTGGCAGCGTTCAATCTTTTTCCGATTCCGCCGCTGGACGGCGGCCGCGTG
CTGACCGCACTGCTGCCCCCGCGTGTGGCTTATTCGGTGTCGCGCATCGAGCCGTACGGGATTTTTGTCGTGCTGGCGCT
GGTGGCGGCCGGTGTGATCACCTCGGTCTGGATGCGGCCGGTGATCAACCTGCTGAGTTCGGTCGTCGAGCTGATGCTGC
GGCCGATCATCATGCTGCTGCAGTAG

Upstream 100 bases:

>100_bases
CGAGCTCGTGCGCCAGGGAAGGGGCGATATCGCACGGTTCGGTCTCTGAATTCGTGCCGCATGTGATGCGGCGGCCAGCC
CGCCCGGTACAATAAGTCTC

Downstream 100 bases:

>100_bases
GGGCGAGGTCCATGCTCGCCCATGCGCCGACCGGCGCTCCGTCCGACTGGGTTACGCGCTGGGCGCACCTCGTGCGGCCA
AGCGGCCGCGTACTTGATCT

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDSSLIQTFAVYALPVLFAITLHEASHGYVAKHFGDTTAYALGRVSLNPARHIDPIGTIAVPLLLYLLTSGQFVFGYAKP
VPVDFGRLRNPRWHGMWVALAGPVSNIVQAFLWALIAIGLAWARVSEPFFSEMARAGVLVNLVVAAFNLFPIPPLDGGRV
LTALLPPRVAYSVSRIEPYGIFVVLALVAAGVITSVWMRPVINLLSSVVELMLRPIIMLLQ

Sequences:

>Translated_221_residues
MDSSLIQTFAVYALPVLFAITLHEASHGYVAKHFGDTTAYALGRVSLNPARHIDPIGTIAVPLLLYLLTSGQFVFGYAKP
VPVDFGRLRNPRWHGMWVALAGPVSNIVQAFLWALIAIGLAWARVSEPFFSEMARAGVLVNLVVAAFNLFPIPPLDGGRV
LTALLPPRVAYSVSRIEPYGIFVVLALVAAGVITSVWMRPVINLLSSVVELMLRPIIMLLQ
>Mature_221_residues
MDSSLIQTFAVYALPVLFAITLHEASHGYVAKHFGDTTAYALGRVSLNPARHIDPIGTIAVPLLLYLLTSGQFVFGYAKP
VPVDFGRLRNPRWHGMWVALAGPVSNIVQAFLWALIAIGLAWARVSEPFFSEMARAGVLVNLVVAAFNLFPIPPLDGGRV
LTALLPPRVAYSVSRIEPYGIFVVLALVAAGVITSVWMRPVINLLSSVVELMLRPIIMLLQ

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24057; Mature: 24057

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSLIQTFAVYALPVLFAITLHEASHGYVAKHFGDTTAYALGRVSLNPARHIDPIGTIA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCCHHCCCCHHHHH
VPLLLYLLTSGQFVFGYAKPVPVDFGRLRNPRWHGMWVALAGPVSNIVQAFLWALIAIGL
HHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
AWARVSEPFFSEMARAGVLVNLVVAAFNLFPIPPLDGGRVLTALLPPRVAYSVSRIEPYG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHH
IFVVLALVAAGVITSVWMRPVINLLSSVVELMLRPIIMLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSSLIQTFAVYALPVLFAITLHEASHGYVAKHFGDTTAYALGRVSLNPARHIDPIGTIA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCCHHCCCCHHHHH
VPLLLYLLTSGQFVFGYAKPVPVDFGRLRNPRWHGMWVALAGPVSNIVQAFLWALIAIGL
HHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
AWARVSEPFFSEMARAGVLVNLVVAAFNLFPIPPLDGGRVLTALLPPRVAYSVSRIEPYG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHH
IFVVLALVAAGVITSVWMRPVINLLSSVVELMLRPIIMLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]