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The map label for this gene is ycdI [C]

Identifier: 73540748

GI number: 73540748

Start: 1138107

End: 1138694

Strand: Direct

Name: ycdI [C]

Synonym: Reut_A1045

Alternate gene names: 73540748

Gene position: 1138107-1138694 (Clockwise)

Preceding gene: 73540747

Following gene: 73540751

Centisome position: 29.9

GC content: 63.61

Gene sequence:

>588_bases
ATGACCCAGATCGATCAGGCAGCCCTGGCCCAGTTGTTCACCGAAGCCCGCACGCACAACGTGTGGCAAGATCGTCACGT
GGACGATGCCGTGCTGAACCAGGTCTATGAAGCCATGAAGTTCGGCCCGACCGCTGCCAACAGCTGCCCGGTACGTATCG
TCTTCGTCAAGAGCGCCGCCGAGAAGGCCCGCCTGGTCGAGTGCGTGTCGGCTGGCAACACCGAAAAGACGCGCTCGGCG
CCCGTCACGGCGATCATCGCGTTCGACAAGGCTTTCCACGACCAGTTGCCCAAGCTGTTCCCGCATGCCGATGCACGCTC
GTGGTATGCCGGCAACGATGCCAAGATCGCGCGCGATGCGCTGATGAACAGCTCGCTGCAAGGCGGCTACTTCATCCTGG
CCGCACGTGCCATGGGCCTGGACTGCGGCCCGATGGGCGGCTTCGACGCCGACAAGGTCAATGCCGCGTTCTTCCCGGAC
GGCAAGTGGGAAGTCAACTTCCTGTGCAACCTCGGCTATGGCGAAGGCGACAAGCTGCATCCGCGCCTGCCGCGCCTGTC
GTTCGACGAGGCTTGCCGGATCGTCTGA

Upstream 100 bases:

>100_bases
AACAGAATTGAATTTCCCGATCAAAGCGCCTGCACGCGAGGCGCCTCGCGCTTCGGTACAATTCGCGTTCCCTTTCACAC
CCATGTACAGGAACGAGCGC

Downstream 100 bases:

>100_bases
TCTGGCACGTCGCTCATGAAAAAAGACCCGCCAACGCGGGTCTTTTTCGTTCGTGGGTGCAATCAGCCTTGCGGCGCTTC
GGTCTTGTCGCGGTACTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTQIDQAALAQLFTEARTHNVWQDRHVDDAVLNQVYEAMKFGPTAANSCPVRIVFVKSAAEKARLVECVSAGNTEKTRSA
PVTAIIAFDKAFHDQLPKLFPHADARSWYAGNDAKIARDALMNSSLQGGYFILAARAMGLDCGPMGGFDADKVNAAFFPD
GKWEVNFLCNLGYGEGDKLHPRLPRLSFDEACRIV

Sequences:

>Translated_195_residues
MTQIDQAALAQLFTEARTHNVWQDRHVDDAVLNQVYEAMKFGPTAANSCPVRIVFVKSAAEKARLVECVSAGNTEKTRSA
PVTAIIAFDKAFHDQLPKLFPHADARSWYAGNDAKIARDALMNSSLQGGYFILAARAMGLDCGPMGGFDADKVNAAFFPD
GKWEVNFLCNLGYGEGDKLHPRLPRLSFDEACRIV
>Mature_194_residues
TQIDQAALAQLFTEARTHNVWQDRHVDDAVLNQVYEAMKFGPTAANSCPVRIVFVKSAAEKARLVECVSAGNTEKTRSAP
VTAIIAFDKAFHDQLPKLFPHADARSWYAGNDAKIARDALMNSSLQGGYFILAARAMGLDCGPMGGFDADKVNAAFFPDG
KWEVNFLCNLGYGEGDKLHPRLPRLSFDEACRIV

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=192, Percent_Identity=50.5208333333333, Blast_Score=211, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 21395; Mature: 21264

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIDQAALAQLFTEARTHNVWQDRHVDDAVLNQVYEAMKFGPTAANSCPVRIVFVKSAA
CCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH
EKARLVECVSAGNTEKTRSAPVTAIIAFDKAFHDQLPKLFPHADARSWYAGNDAKIARDA
HHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHH
LMNSSLQGGYFILAARAMGLDCGPMGGFDADKVNAAFFPDGKWEVNFLCNLGYGEGDKLH
HHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCC
PRLPRLSFDEACRIV
CCCCCCCHHHHCCCC
>Mature Secondary Structure 
TQIDQAALAQLFTEARTHNVWQDRHVDDAVLNQVYEAMKFGPTAANSCPVRIVFVKSAA
CCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH
EKARLVECVSAGNTEKTRSAPVTAIIAFDKAFHDQLPKLFPHADARSWYAGNDAKIARDA
HHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHH
LMNSSLQGGYFILAARAMGLDCGPMGGFDADKVNAAFFPDGKWEVNFLCNLGYGEGDKLH
HHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCC
PRLPRLSFDEACRIV
CCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]