| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540560
Identifier: 73540560
GI number: 73540560
Start: 928660
End: 929433
Strand: Direct
Name: 73540560
Synonym: Reut_A0857
Alternate gene names: NA
Gene position: 928660-929433 (Clockwise)
Preceding gene: 73540559
Following gene: 73540561
Centisome position: 24.4
GC content: 67.05
Gene sequence:
>774_bases ATGTCTTTTACCTTGCAGCCGGCGCGTGCCGCCGGAGCACCCAGCCCCGTCACGCCGGAAGAGCAGCGCGTCCGCGTCGA CCTGGCAGCCGCCTACCGGCTGTCGGCGCTCCAGGGCTGGGATGACCTGATCTACACCCATATCTCGGCCACGGTTCCTG GCGAGCCGGATCACTTCCTGATCAACCCGTTCGGCTTTGCCTTCGAGGAAATCCGGGCATCGGACCTCGTCAAGATCAAT GGCCGCGGCGAGGTGGTCGGCGAGACCGTCCATCCGGTCAATGTGACCGGCTTCGCGCTGCACGGCGCGGTGCACGCGGC ACGCGCCGATGCGATGTGCGTCATGCACCTGCACAACACCGCCGGCATCGCGGTGTCGGCACAGGCCGAAGGCCTCCTGC CGCTGTCGCAGCACGCGATGCGTTTCCACTGTCGCATGGCTTACCACGACTACGAAGGCCTCGCGTTCACGCCGGCCGAA GGCGCGCGGCTGACGGCATCGCTCGGCCAGCAGCAGGCCATGCTCTTGCGCAATCACGGCACGCTCACCGTCGGTCGTAC GGTTGCCGAAGCCTATGTGCTGATGGCGACGCTGATCAAGGCATGCGAGGTCCAGATCGGCGCGCAGGCAGGCGGCCGGC TCGTGCGACCCGCGCCCGGCGTGGCGGAAAAGGCGTCCGAGCAGCTCTACGACAACGGCGCCATAGAAGGCGCGCTGGAG TGGCCGGCGCTGCTGCGCAAACTCGATAGAATCGATGCCTCGTTCCGGGACTGA
Upstream 100 bases:
>100_bases TGCGCTACAGTAACGCCTTCGCCGCCCTTTTGCGGACTCCAGACTCAGGAAGCCGGGACCAACACCGGCACCAGACACCG GGCGGCGCAGGAGCGACCCC
Downstream 100 bases:
>100_bases TTGCCCGCGACAGACAGACGAACAAACGAACACCCAAAGACAACGCAAGGAGCCAGGAATGCCGACGTTTCACGTAGAGA TGTTTGAAGGCCGCACCATC
Product: aldolase II superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSFTLQPARAAGAPSPVTPEEQRVRVDLAAAYRLSALQGWDDLIYTHISATVPGEPDHFLINPFGFAFEEIRASDLVKIN GRGEVVGETVHPVNVTGFALHGAVHAARADAMCVMHLHNTAGIAVSAQAEGLLPLSQHAMRFHCRMAYHDYEGLAFTPAE GARLTASLGQQQAMLLRNHGTLTVGRTVAEAYVLMATLIKACEVQIGAQAGGRLVRPAPGVAEKASEQLYDNGAIEGALE WPALLRKLDRIDASFRD
Sequences:
>Translated_257_residues MSFTLQPARAAGAPSPVTPEEQRVRVDLAAAYRLSALQGWDDLIYTHISATVPGEPDHFLINPFGFAFEEIRASDLVKIN GRGEVVGETVHPVNVTGFALHGAVHAARADAMCVMHLHNTAGIAVSAQAEGLLPLSQHAMRFHCRMAYHDYEGLAFTPAE GARLTASLGQQQAMLLRNHGTLTVGRTVAEAYVLMATLIKACEVQIGAQAGGRLVRPAPGVAEKASEQLYDNGAIEGALE WPALLRKLDRIDASFRD >Mature_256_residues SFTLQPARAAGAPSPVTPEEQRVRVDLAAAYRLSALQGWDDLIYTHISATVPGEPDHFLINPFGFAFEEIRASDLVKING RGEVVGETVHPVNVTGFALHGAVHAARADAMCVMHLHNTAGIAVSAQAEGLLPLSQHAMRFHCRMAYHDYEGLAFTPAEG ARLTASLGQQQAMLLRNHGTLTVGRTVAEAYVLMATLIKACEVQIGAQAGGRLVRPAPGVAEKASEQLYDNGAIEGALEW PALLRKLDRIDASFRD
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family [H]
Homologues:
Organism=Homo sapiens, GI29826325, Length=197, Percent_Identity=46.7005076142132, Blast_Score=172, Evalue=3e-43, Organism=Homo sapiens, GI29826319, Length=197, Percent_Identity=46.7005076142132, Blast_Score=171, Evalue=4e-43, Organism=Homo sapiens, GI29826321, Length=197, Percent_Identity=46.7005076142132, Blast_Score=171, Evalue=4e-43, Organism=Homo sapiens, GI29826323, Length=197, Percent_Identity=46.7005076142132, Blast_Score=171, Evalue=4e-43, Organism=Homo sapiens, GI297307158, Length=197, Percent_Identity=43.1472081218274, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI9257192, Length=197, Percent_Identity=43.1472081218274, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI9257190, Length=197, Percent_Identity=43.1472081218274, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI89276787, Length=197, Percent_Identity=43.1472081218274, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI297307160, Length=197, Percent_Identity=43.1472081218274, Blast_Score=151, Evalue=5e-37, Organism=Homo sapiens, GI9943848, Length=194, Percent_Identity=40.7216494845361, Blast_Score=140, Evalue=9e-34, Organism=Homo sapiens, GI9951927, Length=194, Percent_Identity=40.7216494845361, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI62912453, Length=194, Percent_Identity=40.7216494845361, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI115533216, Length=251, Percent_Identity=39.4422310756972, Blast_Score=163, Evalue=9e-41, Organism=Caenorhabditis elegans, GI115533218, Length=251, Percent_Identity=39.4422310756972, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71989550, Length=238, Percent_Identity=33.6134453781513, Blast_Score=130, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71989560, Length=242, Percent_Identity=33.4710743801653, Blast_Score=130, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71989544, Length=238, Percent_Identity=33.6134453781513, Blast_Score=130, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71989541, Length=238, Percent_Identity=33.6134453781513, Blast_Score=130, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71989555, Length=242, Percent_Identity=33.4710743801653, Blast_Score=130, Evalue=7e-31, Organism=Drosophila melanogaster, GI281363755, Length=189, Percent_Identity=37.5661375661376, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI281363751, Length=189, Percent_Identity=37.5661375661376, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24655690, Length=189, Percent_Identity=37.5661375661376, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24655685, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI281363761, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI281363759, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI281363753, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI281363763, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI281363757, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI17136738, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: NA
Molecular weight: Translated: 27599; Mature: 27468
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTLQPARAAGAPSPVTPEEQRVRVDLAAAYRLSALQGWDDLIYTHISATVPGEPDHFL CCCCCCCHHHCCCCCCCCCCHHEEEEEHHHHHHHHHHCCHHHHHEEEEEEECCCCCCEEE INPFGFAFEEIRASDLVKINGRGEVVGETVHPVNVTGFALHGAVHAARADAMCVMHLHNT ECCHHHHHHHHCCCCEEEECCCCCEEECEECCCEEEEEEHHHHHHHHHCCCEEEEEEECC AGIAVSAQAEGLLPLSQHAMRFHCRMAYHDYEGLAFTPAEGARLTASLGQQQAMLLRNHG CCEEEECCCCCCCCHHHHHHHHHEEEEEECCCCEEECCCCCCEEEHHHCHHHHHHHHCCC TLTVGRTVAEAYVLMATLIKACEVQIGAQAGGRLVRPAPGVAEKASEQLYDNGAIEGALE CEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCHH WPALLRKLDRIDASFRD HHHHHHHHHHHCCCCCC >Mature Secondary Structure SFTLQPARAAGAPSPVTPEEQRVRVDLAAAYRLSALQGWDDLIYTHISATVPGEPDHFL CCCCCCHHHCCCCCCCCCCHHEEEEEHHHHHHHHHHCCHHHHHEEEEEEECCCCCCEEE INPFGFAFEEIRASDLVKINGRGEVVGETVHPVNVTGFALHGAVHAARADAMCVMHLHNT ECCHHHHHHHHCCCCEEEECCCCCEEECEECCCEEEEEEHHHHHHHHHCCCEEEEEEECC AGIAVSAQAEGLLPLSQHAMRFHCRMAYHDYEGLAFTPAEGARLTASLGQQQAMLLRNHG CCEEEECCCCCCCCHHHHHHHHHEEEEEECCCCEEECCCCCCEEEHHHCHHHHHHHHCCC TLTVGRTVAEAYVLMATLIKACEVQIGAQAGGRLVRPAPGVAEKASEQLYDNGAIEGALE CEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCHH WPALLRKLDRIDASFRD HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]