| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yjiJ [H]
Identifier: 73540559
GI number: 73540559
Start: 927334
End: 928572
Strand: Direct
Name: yjiJ [H]
Synonym: Reut_A0856
Alternate gene names: 73540559
Gene position: 927334-928572 (Clockwise)
Preceding gene: 73540558
Following gene: 73540560
Centisome position: 24.36
GC content: 70.62
Gene sequence:
>1239_bases ATGGCTGCGGCAGGTACAGGAACGGCAGCAGCGAGCATGTCGCGGCGCGAGTCCGGAGCGTGGGCGGTTGCCCTGGCAGG GCTGGCATGCCTGGCCGTGGTGATGGGCATCGGCCGCTTCGCGTTCACGCCGCTGCTGCCGATGATGCTGCACGATGGCA CGGTCAACCTGCATGAGGGCGGCTGGCTCGCCACACTCAACTACATTGGCTATTTTGTCGGCGCCGCCGTCTGCCTGTTC ATTCGCCCGGAGCCCGCGCGCACGATCCGGGTCGGGCTGGTGGCCACGGTGCTGCTGACGCTGGGCATGGCGCTGCCCGG CGGCATGCCGGCCTGGGCGGTTTGGCGTGCGTTGGCGGGTGTGGCTAGCGCCGTCGTGCTTGTCTACACCTCGGGCTGGT GCATGCAACGGCTGGCGGATCTGGGACAGCCGGCACTGGGCGGCCTGATCTTCTGCGGGCCGGGCATCGGCATCGTAGTG ACCGGCGTCTCGGCGTTCGGCATGGTCGCCGCCGGCTGGGATGCCTCCACCGGCTGGATCGCCTTCACGGTCATGGCAGC GGTGCTGGTGCTCGCGGTCTGGCGGGTATTCTCGTCCGGCGAACGGCCGGCGCCCGCAAGCGCCAAAACCAGTGCCATCG ACCCGGCACGCAGCGCGCGGCTGGATGGCGAGACGTGGGCACTGACGGTGGCCTATGGCCTCGCGGGTTTCGGCTACATC ATCACGGCGACCTTCCTGCCCGTGATCGCGCGGCAGGCGATGCCGGGCTCGGTGTGGGCGGACCTGTTCTGGCCGGTGTT CGGCGCCGGCGTGACGATCGGCGCCTATCTCGCGACGCGCGTGGGCATGGCGCACGACAACCGCCGGTTGCTCGCATGGG CCTACGCCATGCAGGCACTGGGCGTGGCGATCGCCGTGGTCTTCCCGAACGTCACCGGCTTTGCCGTGAGCAGCCTGCTG GCTGGGCTGCCGTTCACCGCGCTGGTGTCGTTCGCGATGCGCGAGGCGCGCCGGCTGTGGGGGCCGCAGGCGCCGCGCCT GATGGGCCTGATGACGGCGTCCTACGGCCTGGGCCAGATCATCGGACCGCCGCTGGCCACGGCGCTCGTCGCGCGCTCGG GTGGCTTTGCAAGCTCGCTGGCGTGCGCATCCGCCGCGCTGCTCGCGGGCGCCGTGATGTTCGTATGGATGCGCCGCGCC TGGCCCATCCCGGTGCCGCCGCAGACTGCGCTACAGTAA
Upstream 100 bases:
>100_bases AGGATCCACGCTCTACCGTGGTGGTCATCGACGAGGTCGATCCGGATAACTGGGGCTTTGCGGGCGAAACCACCACGGAG CGCCGCAAGGCGGGCCGGTG
Downstream 100 bases:
>100_bases CGCCTTCGCCGCCCTTTTGCGGACTCCAGACTCAGGAAGCCGGGACCAACACCGGCACCAGACACCGGGCGGCGCAGGAG CGACCCCATGTCTTTTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MAAAGTGTAAASMSRRESGAWAVALAGLACLAVVMGIGRFAFTPLLPMMLHDGTVNLHEGGWLATLNYIGYFVGAAVCLF IRPEPARTIRVGLVATVLLTLGMALPGGMPAWAVWRALAGVASAVVLVYTSGWCMQRLADLGQPALGGLIFCGPGIGIVV TGVSAFGMVAAGWDASTGWIAFTVMAAVLVLAVWRVFSSGERPAPASAKTSAIDPARSARLDGETWALTVAYGLAGFGYI ITATFLPVIARQAMPGSVWADLFWPVFGAGVTIGAYLATRVGMAHDNRRLLAWAYAMQALGVAIAVVFPNVTGFAVSSLL AGLPFTALVSFAMREARRLWGPQAPRLMGLMTASYGLGQIIGPPLATALVARSGGFASSLACASAALLAGAVMFVWMRRA WPIPVPPQTALQ
Sequences:
>Translated_412_residues MAAAGTGTAAASMSRRESGAWAVALAGLACLAVVMGIGRFAFTPLLPMMLHDGTVNLHEGGWLATLNYIGYFVGAAVCLF IRPEPARTIRVGLVATVLLTLGMALPGGMPAWAVWRALAGVASAVVLVYTSGWCMQRLADLGQPALGGLIFCGPGIGIVV TGVSAFGMVAAGWDASTGWIAFTVMAAVLVLAVWRVFSSGERPAPASAKTSAIDPARSARLDGETWALTVAYGLAGFGYI ITATFLPVIARQAMPGSVWADLFWPVFGAGVTIGAYLATRVGMAHDNRRLLAWAYAMQALGVAIAVVFPNVTGFAVSSLL AGLPFTALVSFAMREARRLWGPQAPRLMGLMTASYGLGQIIGPPLATALVARSGGFASSLACASAALLAGAVMFVWMRRA WPIPVPPQTALQ >Mature_411_residues AAAGTGTAAASMSRRESGAWAVALAGLACLAVVMGIGRFAFTPLLPMMLHDGTVNLHEGGWLATLNYIGYFVGAAVCLFI RPEPARTIRVGLVATVLLTLGMALPGGMPAWAVWRALAGVASAVVLVYTSGWCMQRLADLGQPALGGLIFCGPGIGIVVT GVSAFGMVAAGWDASTGWIAFTVMAAVLVLAVWRVFSSGERPAPASAKTSAIDPARSARLDGETWALTVAYGLAGFGYII TATFLPVIARQAMPGSVWADLFWPVFGAGVTIGAYLATRVGMAHDNRRLLAWAYAMQALGVAIAVVFPNVTGFAVSSLLA GLPFTALVSFAMREARRLWGPQAPRLMGLMTASYGLGQIIGPPLATALVARSGGFASSLACASAALLAGAVMFVWMRRAW PIPVPPQTALQ
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790788, Length=379, Percent_Identity=31.6622691292876, Blast_Score=126, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010645 - InterPro: IPR016196 [H]
Pfam domain/function: PF06779 DUF1228 [H]
EC number: NA
Molecular weight: Translated: 42630; Mature: 42499
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAGTGTAAASMSRRESGAWAVALAGLACLAVVMGIGRFAFTPLLPMMLHDGTVNLHEG CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC GWLATLNYIGYFVGAAVCLFIRPEPARTIRVGLVATVLLTLGMALPGGMPAWAVWRALAG CHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VASAVVLVYTSGWCMQRLADLGQPALGGLIFCGPGIGIVVTGVSAFGMVAAGWDASTGWI HHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEECHHHHHHHEECCCCCCHHH AFTVMAAVLVLAVWRVFSSGERPAPASAKTSAIDPARSARLDGETWALTVAYGLAGFGYI HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHH ITATFLPVIARQAMPGSVWADLFWPVFGAGVTIGAYLATRVGMAHDNRRLLAWAYAMQAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH GVAIAVVFPNVTGFAVSSLLAGLPFTALVSFAMREARRLWGPQAPRLMGLMTASYGLGQI HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH IGPPLATALVARSGGFASSLACASAALLAGAVMFVWMRRAWPIPVPPQTALQ CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC >Mature Secondary Structure AAAGTGTAAASMSRRESGAWAVALAGLACLAVVMGIGRFAFTPLLPMMLHDGTVNLHEG CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC GWLATLNYIGYFVGAAVCLFIRPEPARTIRVGLVATVLLTLGMALPGGMPAWAVWRALAG CHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VASAVVLVYTSGWCMQRLADLGQPALGGLIFCGPGIGIVVTGVSAFGMVAAGWDASTGWI HHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEECHHHHHHHEECCCCCCHHH AFTVMAAVLVLAVWRVFSSGERPAPASAKTSAIDPARSARLDGETWALTVAYGLAGFGYI HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHH ITATFLPVIARQAMPGSVWADLFWPVFGAGVTIGAYLATRVGMAHDNRRLLAWAYAMQAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH GVAIAVVFPNVTGFAVSSLLAGLPFTALVSFAMREARRLWGPQAPRLMGLMTASYGLGQI HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH IGPPLATALVARSGGFASSLACASAALLAGAVMFVWMRRAWPIPVPPQTALQ CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]