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The map label for this gene is yeeY [H]

Identifier: 73540273

GI number: 73540273

Start: 613635

End: 614615

Strand: Direct

Name: yeeY [H]

Synonym: Reut_A0567

Alternate gene names: 73540273

Gene position: 613635-614615 (Clockwise)

Preceding gene: 73540267

Following gene: 73540279

Centisome position: 16.12

GC content: 63.91

Gene sequence:

>981_bases
ATGGAGTCTATCTGGTTTGACGGGATTGCCAAGTTAGGTAGTATCGCAAAATCCGATACATCATCCGCAGCATCCATCAT
GTCGCTTTCCATCGACCAGTTGCAGGCTTTTGCCGCGGCAGCCGAAACCGGCTCGTTCTCTGCCGCTGCGCGCAGGCTCG
GCAAGGCGCAGTCGGTCATCAGCGCGGCGGTGGCCAATCTCGAGATCGACGTTGGCAACGCGCTGTTCGACCGTACTGGT
CGCTATCCCGTCCTGACGCCGGTCGGCGAGCGTCTGCTGGCAGAGGCGCGGGTGATCCTGGAGCGCTGCGAGCACTTTCG
CGGCGTGGCCATGAGCCTCGGGGAGGGCGTGGAGACCCGCCTTGTCCTGGCTGTGGACGAACTCTATCCGGAAGAAACGC
TTGGCGGGCTGCTGGAAGAATTCTCGGGCCTGTTTCCCGCCGTCGAGCTGGAGTTGCTGTTTCCACTGATGGAGGACGTC
AGCCGGCTGGTGCTGGAAGGCGGCGCTGACCTCGGCATCATGTGGCGACAGGAGGTCCTGCCGCCGGCGCTCGGCTTTCA
CGCGCTCGGGTGGGTGCCGATGCAGCTGGTATGTGCGCCCGATCATCCGCTGGCTGGCGGCCAGCGGATCGACTGGGAAG
AGCTCAAGCGCTACCGTCAGCTGATGGTCGCTACGCGGACCGACAGCGAGGAAAAGATGCGGCTGCGGGTGGCCTCCGAT
GTGTGGTGGGTGGAAAGCCAGTGGGTGATTGTCGAACTCGTCAAACGCCGACTTGGCTGGGCCTTTGTGCCGTGGCACGT
CGTGGCGAACTCGCCCGCTGCGGCGAAACTGGTATCGCCGCCCTTGGCGTTTCAGGAACAGGATTGGCCGGTGGCGATGG
AGCTTGTCTGGCTCAAGCAGCGGCCGGCTGGGAAGGCGGCCCGGTGGTTAAGGGACAGGATTTGTGGGCAGGTCTTGCCG
CGGCCGAGTGGGGTGAAGTGA

Upstream 100 bases:

>100_bases
CGGGGCAAACGCCAGCAGGCCGATGACTTCAAAGCCAATGGCGTGGCGGATCCGGTCACGGGTGTTGCGCATGAGACTCT
CCTGCAAATGAAGCGATGGG

Downstream 100 bases:

>100_bases
TGGGAGGGCGCGTTCACACCATCTTCTTGTCGCTCGGACAAGAAGTAAGTCGGGGGTTGTCAGTTTTTTTGTGTGCAGGG
CAGTTAAAGGCTCACCGTCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MESIWFDGIAKLGSIAKSDTSSAASIMSLSIDQLQAFAAAAETGSFSAAARRLGKAQSVISAAVANLEIDVGNALFDRTG
RYPVLTPVGERLLAEARVILERCEHFRGVAMSLGEGVETRLVLAVDELYPEETLGGLLEEFSGLFPAVELELLFPLMEDV
SRLVLEGGADLGIMWRQEVLPPALGFHALGWVPMQLVCAPDHPLAGGQRIDWEELKRYRQLMVATRTDSEEKMRLRVASD
VWWVESQWVIVELVKRRLGWAFVPWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQRPAGKAARWLRDRICGQVLP
RPSGVK

Sequences:

>Translated_326_residues
MESIWFDGIAKLGSIAKSDTSSAASIMSLSIDQLQAFAAAAETGSFSAAARRLGKAQSVISAAVANLEIDVGNALFDRTG
RYPVLTPVGERLLAEARVILERCEHFRGVAMSLGEGVETRLVLAVDELYPEETLGGLLEEFSGLFPAVELELLFPLMEDV
SRLVLEGGADLGIMWRQEVLPPALGFHALGWVPMQLVCAPDHPLAGGQRIDWEELKRYRQLMVATRTDSEEKMRLRVASD
VWWVESQWVIVELVKRRLGWAFVPWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQRPAGKAARWLRDRICGQVLP
RPSGVK
>Mature_326_residues
MESIWFDGIAKLGSIAKSDTSSAASIMSLSIDQLQAFAAAAETGSFSAAARRLGKAQSVISAAVANLEIDVGNALFDRTG
RYPVLTPVGERLLAEARVILERCEHFRGVAMSLGEGVETRLVLAVDELYPEETLGGLLEEFSGLFPAVELELLFPLMEDV
SRLVLEGGADLGIMWRQEVLPPALGFHALGWVPMQLVCAPDHPLAGGQRIDWEELKRYRQLMVATRTDSEEKMRLRVASD
VWWVESQWVIVELVKRRLGWAFVPWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQRPAGKAARWLRDRICGQVLP
RPSGVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=298, Percent_Identity=27.5167785234899, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI145693105, Length=210, Percent_Identity=29.0476190476191, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786713, Length=210, Percent_Identity=32.3809523809524, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790262, Length=250, Percent_Identity=28.4, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786508, Length=305, Percent_Identity=22.9508196721311, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787879, Length=301, Percent_Identity=25.5813953488372, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789492, Length=185, Percent_Identity=27.5675675675676, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787949, Length=173, Percent_Identity=28.9017341040462, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI157672245, Length=201, Percent_Identity=26.3681592039801, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36005; Mature: 36005

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIWFDGIAKLGSIAKSDTSSAASIMSLSIDQLQAFAAAAETGSFSAAARRLGKAQSVI
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SAAVANLEIDVGNALFDRTGRYPVLTPVGERLLAEARVILERCEHFRGVAMSLGEGVETR
HHHHHHCEEECCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LVLAVDELYPEETLGGLLEEFSGLFPAVELELLFPLMEDVSRLVLEGGADLGIMWRQEVL
EEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHC
PPALGFHALGWVPMQLVCAPDHPLAGGQRIDWEELKRYRQLMVATRTDSEEKMRLRVASD
CHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHEECCC
VWWVESQWVIVELVKRRLGWAFVPWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQ
EEEECCCHHHHHHHHHHHCCEEECCEEEECCCCHHHHCCCCCCCCCCCCCCEEHEEEHHC
RPAGKAARWLRDRICGQVLPRPSGVK
CCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MESIWFDGIAKLGSIAKSDTSSAASIMSLSIDQLQAFAAAAETGSFSAAARRLGKAQSVI
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SAAVANLEIDVGNALFDRTGRYPVLTPVGERLLAEARVILERCEHFRGVAMSLGEGVETR
HHHHHHCEEECCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LVLAVDELYPEETLGGLLEEFSGLFPAVELELLFPLMEDVSRLVLEGGADLGIMWRQEVL
EEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHC
PPALGFHALGWVPMQLVCAPDHPLAGGQRIDWEELKRYRQLMVATRTDSEEKMRLRVASD
CHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHEECCC
VWWVESQWVIVELVKRRLGWAFVPWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQ
EEEECCCHHHHHHHHHHHCCEEECCEEEECCCCHHHHCCCCCCCCCCCCCCEEHEEEHHC
RPAGKAARWLRDRICGQVLPRPSGVK
CCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]