| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is yajO [H]
Identifier: 71908374
GI number: 71908374
Start: 2962315
End: 2963286
Strand: Reverse
Name: yajO [H]
Synonym: Daro_2761
Alternate gene names: 71908374
Gene position: 2963286-2962315 (Counterclockwise)
Preceding gene: 71908375
Following gene: 71908373
Centisome position: 65.83
GC content: 59.36
Gene sequence:
>972_bases ATGGATTACGTACAGTTTGGCTCGACCGGCCTGAAGGTCTCACGCCTTGCCCTTGGTTGCATGACTTACGGGACGCCCGA CTGGCGGCCATGGGTGCTCGATGAAGCGACGAGCCGGCCGTTCATTCGTCAGGCGCTCGATCTTGGGATCAATTTCTTCG ATACGGCAGACATGTATTCGCTTGGCGTTGGTGAATCGGTGGTTGGTCTAGCCTTGAAGGATTTTGCGCGGCGAGAGGAT GTGGTCATTGCGACCAAGGTTTTCTACCCGATGAGCGACAAGCCCAATGATCGCGGCTTGTCGCGAAAGCATATTCTGGC CAGCATCGATGCCTCGCTGAAACGCCTTGGCACTGATTATGTCGATCTGTACATCATCCACCGCTTCGACCCGCTGACCC CGATCGACGAAACCCTGGCCGCACTCGATACCGTCGTGCGCTCGGGCAAAGCCCGCTATATCGGTGCCTCGTCAATGTTC GCCTGGCAGTTCATGGCCATGCTGGCGCGACAACGCGAGCTGGGTTTGAGTTGTTTTGTCTCGATGCAGAATCATTTCAA CCTGATCTATCGCGAGGAAGAACGGGAGATGCTGCCCCTTTGCCGCCATGAAGGCATTGCTGTTACCCCGTGGTCGCCGC TGGCCCGCGGCCGGCTTGCCGGTGCGCAGCAGGCACAGACCAGGCGCGCGATGACCGACAATTTGGCGCATCAATGGTAT GACCAGCAGGCCATGGAAGATGCCATCGTCGCGGCGGTGAATAAGGTCGCGCAGGCCCGTGGCGTACCACCGGCCCAGAT CGCCATCGCCTGGGTTAATAGCCAGCCGGGGATTACAGCGCCGATCATTGGCGCTTCGAAGGAGCACCATCTGCCCGATG CCATCGCCGGCAGCCAACTCAGGTTGAGTGCTGAGGAGCGGGCCATTCTCGAGGCGCCTTACCATCCACGTCCCGTCGTT GGACACGACTGA
Upstream 100 bases:
>100_bases ACTCCTCAAGCCGGGCGAGGTGATCGCGGCCAAGGATTTGTCGCTTGAAGTTTGCCCAGCAAATATTGACCCCGGAAGTT TTGACTGGATTGGAGCAGAG
Downstream 100 bases:
>100_bases GGCGGAGTCTGATGTTTTCTCATCTTGAGCGCCCTGTTGCGAAGCTTTCCGGCCCGAGGCAGGTCTTTGCCGATTCTGGC CTGGGGTATATCGCCAACGG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MDYVQFGSTGLKVSRLALGCMTYGTPDWRPWVLDEATSRPFIRQALDLGINFFDTADMYSLGVGESVVGLALKDFARRED VVIATKVFYPMSDKPNDRGLSRKHILASIDASLKRLGTDYVDLYIIHRFDPLTPIDETLAALDTVVRSGKARYIGASSMF AWQFMAMLARQRELGLSCFVSMQNHFNLIYREEEREMLPLCRHEGIAVTPWSPLARGRLAGAQQAQTRRAMTDNLAHQWY DQQAMEDAIVAAVNKVAQARGVPPAQIAIAWVNSQPGITAPIIGASKEHHLPDAIAGSQLRLSAEERAILEAPYHPRPVV GHD
Sequences:
>Translated_323_residues MDYVQFGSTGLKVSRLALGCMTYGTPDWRPWVLDEATSRPFIRQALDLGINFFDTADMYSLGVGESVVGLALKDFARRED VVIATKVFYPMSDKPNDRGLSRKHILASIDASLKRLGTDYVDLYIIHRFDPLTPIDETLAALDTVVRSGKARYIGASSMF AWQFMAMLARQRELGLSCFVSMQNHFNLIYREEEREMLPLCRHEGIAVTPWSPLARGRLAGAQQAQTRRAMTDNLAHQWY DQQAMEDAIVAAVNKVAQARGVPPAQIAIAWVNSQPGITAPIIGASKEHHLPDAIAGSQLRLSAEERAILEAPYHPRPVV GHD >Mature_323_residues MDYVQFGSTGLKVSRLALGCMTYGTPDWRPWVLDEATSRPFIRQALDLGINFFDTADMYSLGVGESVVGLALKDFARRED VVIATKVFYPMSDKPNDRGLSRKHILASIDASLKRLGTDYVDLYIIHRFDPLTPIDETLAALDTVVRSGKARYIGASSMF AWQFMAMLARQRELGLSCFVSMQNHFNLIYREEEREMLPLCRHEGIAVTPWSPLARGRLAGAQQAQTRRAMTDNLAHQWY DQQAMEDAIVAAVNKVAQARGVPPAQIAIAWVNSQPGITAPIIGASKEHHLPDAIAGSQLRLSAEERAILEAPYHPRPVV GHD
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=310, Percent_Identity=32.5806451612903, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4504825, Length=308, Percent_Identity=32.4675324675325, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI27436964, Length=310, Percent_Identity=30.6451612903226, Blast_Score=141, Evalue=8e-34, Organism=Homo sapiens, GI27436962, Length=310, Percent_Identity=30.6451612903226, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=31.8885448916409, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI27436966, Length=310, Percent_Identity=30.3225806451613, Blast_Score=138, Evalue=5e-33, Organism=Homo sapiens, GI223718702, Length=199, Percent_Identity=30.1507537688442, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI41152114, Length=201, Percent_Identity=29.8507462686567, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI41327764, Length=184, Percent_Identity=29.3478260869565, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=55.5555555555556, Blast_Score=343, Evalue=6e-96, Organism=Escherichia coli, GI1789375, Length=325, Percent_Identity=32.9230769230769, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=31.4121037463977, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1788070, Length=321, Percent_Identity=31.1526479750779, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788081, Length=283, Percent_Identity=31.095406360424, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI48994888, Length=310, Percent_Identity=27.0967741935484, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786400, Length=271, Percent_Identity=24.7232472324723, Blast_Score=68, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=335, Percent_Identity=37.910447761194, Blast_Score=233, Evalue=4e-62, Organism=Saccharomyces cerevisiae, GI6323998, Length=333, Percent_Identity=27.9279279279279, Blast_Score=126, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=29.4520547945205, Blast_Score=119, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6322615, Length=261, Percent_Identity=29.8850574712644, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6319951, Length=319, Percent_Identity=26.6457680250784, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI24640980, Length=347, Percent_Identity=26.2247838616715, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI45549126, Length=347, Percent_Identity=26.2247838616715, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24646155, Length=319, Percent_Identity=30.0940438871473, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24646159, Length=165, Percent_Identity=36.3636363636364, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24644950, Length=303, Percent_Identity=25.4125412541254, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35921; Mature: 35921
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYVQFGSTGLKVSRLALGCMTYGTPDWRPWVLDEATSRPFIRQALDLGINFFDTADMYS CCCCEECCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHCCCEECCCCHHH LGVGESVVGLALKDFARREDVVIATKVFYPMSDKPNDRGLSRKHILASIDASLKRLGTDY CCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE VDLYIIHRFDPLTPIDETLAALDTVVRSGKARYIGASSMFAWQFMAMLARQRELGLSCFV EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHEE SMQNHFNLIYREEEREMLPLCRHEGIAVTPWSPLARGRLAGAQQAQTRRAMTDNLAHQWY EHHHCCEEEEECCHHHHHHHHHCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH DQQAMEDAIVAAVNKVAQARGVPPAQIAIAWVNSQPGITAPIIGASKEHHLPDAIAGSQL HHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCEECCCCCCCCCCHHCCCCE RLSAEERAILEAPYHPRPVVGHD EECHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MDYVQFGSTGLKVSRLALGCMTYGTPDWRPWVLDEATSRPFIRQALDLGINFFDTADMYS CCCCEECCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHCCCEECCCCHHH LGVGESVVGLALKDFARREDVVIATKVFYPMSDKPNDRGLSRKHILASIDASLKRLGTDY CCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE VDLYIIHRFDPLTPIDETLAALDTVVRSGKARYIGASSMFAWQFMAMLARQRELGLSCFV EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCHHHEE SMQNHFNLIYREEEREMLPLCRHEGIAVTPWSPLARGRLAGAQQAQTRRAMTDNLAHQWY EHHHCCEEEEECCHHHHHHHHHCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH DQQAMEDAIVAAVNKVAQARGVPPAQIAIAWVNSQPGITAPIIGASKEHHLPDAIAGSQL HHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCEECCCCCCCCCCHHCCCCE RLSAEERAILEAPYHPRPVVGHD EECHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]