Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71908344

Identifier: 71908344

GI number: 71908344

Start: 2926778

End: 2927509

Strand: Reverse

Name: 71908344

Synonym: Daro_2731

Alternate gene names: NA

Gene position: 2927509-2926778 (Counterclockwise)

Preceding gene: 71908345

Following gene: 71908343

Centisome position: 65.04

GC content: 60.38

Gene sequence:

>732_bases
ATGCACATCCCAGCGCTCAGCCTGAGTTCCATCCAGCGTGCCCTCGCCGAAGGGTGGCGAATCTTCAGTGCGACGCGCAG
CATCAGCGTTATTTATTCGCTGATTTTTGCCTTGGGGGGGCTGGTCATCATGGGGGGCTTGCTGGCTCAGGGGTGGACGC
CCTTTATCATCGCTGCGGCTGGTGCTTTCATGTTGATCGGACCGGCCATCCTAGCCGGATACTTCGGCATTGCCGCTGCC
TGTGAGGCCGGCGATGCGCCAGCATTGAGCAACGTCAGTCGCGGTTTTTCCCGCGCTTCACGAGCACTGTGGGCCTTGTC
GCTGGTCTGTGCCTTGCTGTTCATGATTTTCGTCACCGATGCGGCGATTCTCTACGCTTACATGGTTGGTGCGAGCCCGG
TCTGGTTGGGCAATTTGTTGCCCGGCAACGCCAATGTGCTTTCCTTTGTCCGCTGGGCCGGTGTTTCCGGCATGGTCGTC
GCCTTTCTACTCTTCTGCATTGCTGCGTTTTCAGTGCCGTTACTGTGCGAGCGGCGCGCCGCCCTGGTCGAGGCGGTGGT
GCTCAGTGTGCGGGTTGTCTTCGGCAATTTCGTGACGGCGATACTGTGGGCAGTTTTGCTATCGGTGACCGTGATCGGTA
GCGTCTTGCTGCTCCCTTTGCTGCCGGTCAGCCTGCCGTGGATGGCCTATGCCAGCCGGGCACTCTACCGCGAAGCACTG
CCGCTCGCCTGA

Upstream 100 bases:

>100_bases
AGAGTGTGAGCGACTGCTTGATTCTTTGATCTGAATCGGAGCGAGGGGTATGCAAAGGGTTTAGGCTGAACGGCCTATTC
CTTGCCGGCTTGTTTCCCAT

Downstream 100 bases:

>100_bases
ACGCCGGTGCTTGCCTAGCGGCAAAGGTATAATTGCTGCCTTTCCGCATTTCCAAGCCCTGCCGTGACTCCCCTCGACAA
CGAAATCTCCCGCCGTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAAGAFMLIGPAILAGYFGIAAA
CEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTDAAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVV
AFLLFCIAAFSVPLLCERRAALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL
PLA

Sequences:

>Translated_243_residues
MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAAGAFMLIGPAILAGYFGIAAA
CEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTDAAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVV
AFLLFCIAAFSVPLLCERRAALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL
PLA
>Mature_243_residues
MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAAGAFMLIGPAILAGYFGIAAA
CEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTDAAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVV
AFLLFCIAAFSVPLLCERRAALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL
PLA

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25622; Mature: 25622

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GAFMLIGPAILAGYFGIAAACEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVVAFLLFCIAAFSVPLLCERRA
HHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PLA
CCC
>Mature Secondary Structure
MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GAFMLIGPAILAGYFGIAAACEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVVAFLLFCIAAFSVPLLCERRA
HHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PLA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA