| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908344
Identifier: 71908344
GI number: 71908344
Start: 2926778
End: 2927509
Strand: Reverse
Name: 71908344
Synonym: Daro_2731
Alternate gene names: NA
Gene position: 2927509-2926778 (Counterclockwise)
Preceding gene: 71908345
Following gene: 71908343
Centisome position: 65.04
GC content: 60.38
Gene sequence:
>732_bases ATGCACATCCCAGCGCTCAGCCTGAGTTCCATCCAGCGTGCCCTCGCCGAAGGGTGGCGAATCTTCAGTGCGACGCGCAG CATCAGCGTTATTTATTCGCTGATTTTTGCCTTGGGGGGGCTGGTCATCATGGGGGGCTTGCTGGCTCAGGGGTGGACGC CCTTTATCATCGCTGCGGCTGGTGCTTTCATGTTGATCGGACCGGCCATCCTAGCCGGATACTTCGGCATTGCCGCTGCC TGTGAGGCCGGCGATGCGCCAGCATTGAGCAACGTCAGTCGCGGTTTTTCCCGCGCTTCACGAGCACTGTGGGCCTTGTC GCTGGTCTGTGCCTTGCTGTTCATGATTTTCGTCACCGATGCGGCGATTCTCTACGCTTACATGGTTGGTGCGAGCCCGG TCTGGTTGGGCAATTTGTTGCCCGGCAACGCCAATGTGCTTTCCTTTGTCCGCTGGGCCGGTGTTTCCGGCATGGTCGTC GCCTTTCTACTCTTCTGCATTGCTGCGTTTTCAGTGCCGTTACTGTGCGAGCGGCGCGCCGCCCTGGTCGAGGCGGTGGT GCTCAGTGTGCGGGTTGTCTTCGGCAATTTCGTGACGGCGATACTGTGGGCAGTTTTGCTATCGGTGACCGTGATCGGTA GCGTCTTGCTGCTCCCTTTGCTGCCGGTCAGCCTGCCGTGGATGGCCTATGCCAGCCGGGCACTCTACCGCGAAGCACTG CCGCTCGCCTGA
Upstream 100 bases:
>100_bases AGAGTGTGAGCGACTGCTTGATTCTTTGATCTGAATCGGAGCGAGGGGTATGCAAAGGGTTTAGGCTGAACGGCCTATTC CTTGCCGGCTTGTTTCCCAT
Downstream 100 bases:
>100_bases ACGCCGGTGCTTGCCTAGCGGCAAAGGTATAATTGCTGCCTTTCCGCATTTCCAAGCCCTGCCGTGACTCCCCTCGACAA CGAAATCTCCCGCCGTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAAGAFMLIGPAILAGYFGIAAA CEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTDAAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVV AFLLFCIAAFSVPLLCERRAALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL PLA
Sequences:
>Translated_243_residues MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAAGAFMLIGPAILAGYFGIAAA CEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTDAAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVV AFLLFCIAAFSVPLLCERRAALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL PLA >Mature_243_residues MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAAGAFMLIGPAILAGYFGIAAA CEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTDAAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVV AFLLFCIAAFSVPLLCERRAALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL PLA
Specific function: Unknown
COG id: COG5473
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25622; Mature: 25622
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GAFMLIGPAILAGYFGIAAACEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVVAFLLFCIAAFSVPLLCERRA HHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC PLA CCC >Mature Secondary Structure MHIPALSLSSIQRALAEGWRIFSATRSISVIYSLIFALGGLVIMGGLLAQGWTPFIIAAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GAFMLIGPAILAGYFGIAAACEAGDAPALSNVSRGFSRASRALWALSLVCALLFMIFVTD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAILYAYMVGASPVWLGNLLPGNANVLSFVRWAGVSGMVVAFLLFCIAAFSVPLLCERRA HHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ALVEAVVLSVRVVFGNFVTAILWAVLLSVTVIGSVLLLPLLPVSLPWMAYASRALYREAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC PLA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA