| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908336
Identifier: 71908336
GI number: 71908336
Start: 2917785
End: 2918597
Strand: Reverse
Name: 71908336
Synonym: Daro_2723
Alternate gene names: NA
Gene position: 2918597-2917785 (Counterclockwise)
Preceding gene: 71908340
Following gene: 71908334
Centisome position: 64.84
GC content: 64.33
Gene sequence:
>813_bases ATGAACGGCATGAGTGGAATGGAGAACGGTAAGAACCAGGCTTGGCATCGCTGGCGTGAGGCTCGGGAGAAGGAACTTTC CGGGCCGGATAGCTGGATTGGATTGATCGGTCTTGATTGGCTGGAACCCGGCGCGAACCGGGTGGGCGGCGCCGAGGATT GTGTTGTGCGTTTGCCGGGGGGGGAGGCGCATCTGGGCGATCTGCTGTGGTCAGGCGATGTGCTGCATTGGCGGCCGCTC AAGGGCGAGGTTCAGGAATTGGCGACCGACCGCGATGGTGCGCCGACGGTGGTTGATTGCGCGCAGTTCGCGTTCTTCGT GGTCGAGCGGGATGGCCGGTTGGCGGCGCGGGTGCGGAATCGGGAATGGGCGAAGACGCAGCCGTTTGCCGGCTTGCAGT ACTTCGACTATGACCCGGCATGGGACATCGAGGCCGACTGGCTGGCGCTGGAGCCGCCGGTGGTGATGGAGGTGCCGAAT GTGACGGGCGACCTCAAGCCGGTGACGGTGGCACACAAGGCCGTTTTCGCGGTGGCCGGTGCTCAGGTCGAATTGCTGCC GATGAGCGTCAGCGAGCGGGAGGTGTTTTTCGTGTTCCGCGACCGGACGAGCGGCCGGGAAAGCTATGGCGCGGGGCGCT TCCTGAAAGCCAAGCCGGCACAGGATGGGCGGATTCGGCTGGATTTCAACTTCGCCTTTAGTCCGCCCTGTGCTTTTACG GCCTTTGCGACCTGCCCGCTGCCGCCGCCGGAAAACTGGCTGGCCTTTCCGGTGACGGCGGGCGAGAAGAAGTACGGGTC AGGCCAGCACTGA
Upstream 100 bases:
>100_bases AAGCGAATCCGACGACAGGTTGAGTATTTCAGGCATGATGGAAACGGCAAACCGGAGAATGCTGGTGGGCTAATCATACA GCGTACTGTACGAGGTAAAT
Downstream 100 bases:
>100_bases GTCCAGCGCCTTGGCCAGGTTGGCCAGGGTCAGCTCGGGGTTGTGCAGTTTTTCCAGACCGAACAGGCCGAGGCGGAAGG TGCGGAAATCGGCCGGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNGMSGMENGKNQAWHRWREAREKELSGPDSWIGLIGLDWLEPGANRVGGAEDCVVRLPGGEAHLGDLLWSGDVLHWRPL KGEVQELATDRDGAPTVVDCAQFAFFVVERDGRLAARVRNREWAKTQPFAGLQYFDYDPAWDIEADWLALEPPVVMEVPN VTGDLKPVTVAHKAVFAVAGAQVELLPMSVSEREVFFVFRDRTSGRESYGAGRFLKAKPAQDGRIRLDFNFAFSPPCAFT AFATCPLPPPENWLAFPVTAGEKKYGSGQH
Sequences:
>Translated_270_residues MNGMSGMENGKNQAWHRWREAREKELSGPDSWIGLIGLDWLEPGANRVGGAEDCVVRLPGGEAHLGDLLWSGDVLHWRPL KGEVQELATDRDGAPTVVDCAQFAFFVVERDGRLAARVRNREWAKTQPFAGLQYFDYDPAWDIEADWLALEPPVVMEVPN VTGDLKPVTVAHKAVFAVAGAQVELLPMSVSEREVFFVFRDRTSGRESYGAGRFLKAKPAQDGRIRLDFNFAFSPPCAFT AFATCPLPPPENWLAFPVTAGEKKYGSGQH >Mature_270_residues MNGMSGMENGKNQAWHRWREAREKELSGPDSWIGLIGLDWLEPGANRVGGAEDCVVRLPGGEAHLGDLLWSGDVLHWRPL KGEVQELATDRDGAPTVVDCAQFAFFVVERDGRLAARVRNREWAKTQPFAGLQYFDYDPAWDIEADWLALEPPVVMEVPN VTGDLKPVTVAHKAVFAVAGAQVELLPMSVSEREVFFVFRDRTSGRESYGAGRFLKAKPAQDGRIRLDFNFAFSPPCAFT AFATCPLPPPENWLAFPVTAGEKKYGSGQH
Specific function: Unknown
COG id: COG3358
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29929; Mature: 29929
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGMSGMENGKNQAWHRWREAREKELSGPDSWIGLIGLDWLEPGANRVGGAEDCVVRLPG CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEECCC GEAHLGDLLWSGDVLHWRPLKGEVQELATDRDGAPTVVDCAQFAFFVVERDGRLAARVRN CCCHHHHHEECCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHEEEEEEECCCCEEEEECC REWAKTQPFAGLQYFDYDPAWDIEADWLALEPPVVMEVPNVTGDLKPVTVAHKAVFAVAG CCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCEEEECCCCCCCCCEEHHHHHHEEEECC AQVELLPMSVSEREVFFVFRDRTSGRESYGAGRFLKAKPAQDGRIRLDFNFAFSPPCAFT CEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCEE AFATCPLPPPENWLAFPVTAGEKKYGSGQH EEEECCCCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MNGMSGMENGKNQAWHRWREAREKELSGPDSWIGLIGLDWLEPGANRVGGAEDCVVRLPG CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEECCC GEAHLGDLLWSGDVLHWRPLKGEVQELATDRDGAPTVVDCAQFAFFVVERDGRLAARVRN CCCHHHHHEECCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHEEEEEEECCCCEEEEECC REWAKTQPFAGLQYFDYDPAWDIEADWLALEPPVVMEVPNVTGDLKPVTVAHKAVFAVAG CCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCEEEECCCCCCCCCEEHHHHHHEEEECC AQVELLPMSVSEREVFFVFRDRTSGRESYGAGRFLKAKPAQDGRIRLDFNFAFSPPCAFT CEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCEE AFATCPLPPPENWLAFPVTAGEKKYGSGQH EEEECCCCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA