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The map label for this gene is czcB [H]

Identifier: 71908240

GI number: 71908240

Start: 2826963

End: 2828162

Strand: Reverse

Name: czcB [H]

Synonym: Daro_2627

Alternate gene names: 71908240

Gene position: 2828162-2826963 (Counterclockwise)

Preceding gene: 71908241

Following gene: 71908239

Centisome position: 62.83

GC content: 64.33

Gene sequence:

>1200_bases
ATGATGACCCGTACCCTGACCGCCGCCGCCCTGGTGCTTTTGCTGACGCTGGCCGCCTGCGGCCGCAATGCCCCCGAGGC
CAAGCCGGCAACCGAAAGCCAAACCGTCGCCCCGGAAAAGACCGCTGCCAACGACAAGGAAGCAGCCAGCGAAGCGCCGG
AAGCCGGTCAAATCCATCTGACCGAGGCGGACATCAAGGCGGCCGGCATCCGCACCGAGGAAGCCAACGAAGCCGAAGTC
CATGAGCGCATCGCCGTCACGGCCACCATTCAGGCCAACCAGGACCGGCTGGCGCATGTCGTCCCACGGGTGCCGGGCCG
CCTCGTCGGCATCACGGCCAAACTGGGCGACCGGGTCAAGGCCGGGCAGACCCTGGCCAGCCTGGACAGTATCGAGATCG
GTGAAGCTCATTCCGCTTATCTTCAGGCCGACAGCCAGTTCCGGCTGGCCCAAGCCGATTTCGAGCGCGCCGAAAAGCTC
CATGCGGAGCAGATCGTGCCGGAAAAGGACTATCTGCGCAGCCGTTCTGAACTGGAAAAAGCCCGCGCCAACCTGCGGGC
GGCCACCGACAAGCTGCGTCTGATGGGTGTGCCGCCGGCCCGCTCGGAATCGGCCGTCTCGGTCTTCCCGGTTAGCGCGC
CCTTTGCCGGCACGGTGATCGAGAAGACGGCGGTGCTGGGTGAGCTTGCCCAGCCGGACAAGTCCCTGTTCACCGTGGCC
GATCTGTCTGTCGTCTGGATCGAGGCCAATCTGTTCGAGAAAGACCTCGGCAAGATCAAGGTCGGCGCCACGGTCGGCGT
ATCGGTTGCCGCCTATCCCGACGAGTTGTTCAAGGGGCGCCTGACCTACATCAGCAGCGTCATGGATAAGGAAAGCCGGA
CGATCAAGGCTCGCGTCGAAGTTGCCAATGCCGACGGCCGCCTGAAGCCCGACATGTTCGCCAACGCCGCCATCGACACC
GCCACGGCGGGCAAGGCGCTGACCGTGCCGACGAGCGCCGTGCTCCTGCTGGAGGGAAAGAAGACCGTCTTCGTTCGTGA
GAAGGAAGGGTTCGAGAAACGGGAAGTCGAGTTGGGCGACAACCTCGGTGGCCGTTTCGTGGTCAAGGAAGGCATCGAGG
CCGGTGAGGCGGTCGTGGTCGAAGGCGCCTATGCGCTCAAGGCGCGGCTGCTGAAATCCAAAATCGGCGATCACGACTAA

Upstream 100 bases:

>100_bases
CCCGTCGCGACTATCTTGATGCCCTCGGCGACTTCATCCAGACCCGCATTGCCCTGGAACAGACCGCCGGCTGGCCCAAC
TTTGCCCACGAGAAGAACAA

Downstream 100 bases:

>100_bases
GGGACAGCCATGCTCAACAAGATCGTCGATATTTCCCTACGCTACAAGCTCCTGGTTCTGGTGGCGCTGGCGCTGATCGT
GCTCCTCGGGGCGCGGGCCT

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MMTRTLTAAALVLLLTLAACGRNAPEAKPATESQTVAPEKTAANDKEAASEAPEAGQIHLTEADIKAAGIRTEEANEAEV
HERIAVTATIQANQDRLAHVVPRVPGRLVGITAKLGDRVKAGQTLASLDSIEIGEAHSAYLQADSQFRLAQADFERAEKL
HAEQIVPEKDYLRSRSELEKARANLRAATDKLRLMGVPPARSESAVSVFPVSAPFAGTVIEKTAVLGELAQPDKSLFTVA
DLSVVWIEANLFEKDLGKIKVGATVGVSVAAYPDELFKGRLTYISSVMDKESRTIKARVEVANADGRLKPDMFANAAIDT
ATAGKALTVPTSAVLLLEGKKTVFVREKEGFEKREVELGDNLGGRFVVKEGIEAGEAVVVEGAYALKARLLKSKIGDHD

Sequences:

>Translated_399_residues
MMTRTLTAAALVLLLTLAACGRNAPEAKPATESQTVAPEKTAANDKEAASEAPEAGQIHLTEADIKAAGIRTEEANEAEV
HERIAVTATIQANQDRLAHVVPRVPGRLVGITAKLGDRVKAGQTLASLDSIEIGEAHSAYLQADSQFRLAQADFERAEKL
HAEQIVPEKDYLRSRSELEKARANLRAATDKLRLMGVPPARSESAVSVFPVSAPFAGTVIEKTAVLGELAQPDKSLFTVA
DLSVVWIEANLFEKDLGKIKVGATVGVSVAAYPDELFKGRLTYISSVMDKESRTIKARVEVANADGRLKPDMFANAAIDT
ATAGKALTVPTSAVLLLEGKKTVFVREKEGFEKREVELGDNLGGRFVVKEGIEAGEAVVVEGAYALKARLLKSKIGDHD
>Mature_399_residues
MMTRTLTAAALVLLLTLAACGRNAPEAKPATESQTVAPEKTAANDKEAASEAPEAGQIHLTEADIKAAGIRTEEANEAEV
HERIAVTATIQANQDRLAHVVPRVPGRLVGITAKLGDRVKAGQTLASLDSIEIGEAHSAYLQADSQFRLAQADFERAEKL
HAEQIVPEKDYLRSRSELEKARANLRAATDKLRLMGVPPARSESAVSVFPVSAPFAGTVIEKTAVLGELAQPDKSLFTVA
DLSVVWIEANLFEKDLGKIKVGATVGVSVAAYPDELFKGRLTYISSVMDKESRTIKARVEVANADGRLKPDMFANAAIDT
ATAGKALTVPTSAVLLLEGKKTVFVREKEGFEKREVELGDNLGGRFVVKEGIEAGEAVVVEGAYALKARLLKSKIGDHD

Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=315, Percent_Identity=25.7142857142857, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1789929, Length=380, Percent_Identity=23.6842105263158, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789665, Length=316, Percent_Identity=24.6835443037975, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42626; Mature: 42626

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTRTLTAAALVLLLTLAACGRNAPEAKPATESQTVAPEKTAANDKEAASEAPEAGQIHL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCCEEEE
TEADIKAAGIRTEEANEAEVHERIAVTATIQANQDRLAHVVPRVPGRLVGITAKLGDRVK
EECCCCCCCCCCCCCCHHHHHHEEEEEEEEECCHHHHHHHHCCCCCEEEEEEHHHCCCHH
AGQTLASLDSIEIGEAHSAYLQADSQFRLAQADFERAEKLHAEQIVPEKDYLRSRSELEK
HCCHHHHCCCEECCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ARANLRAATDKLRLMGVPPARSESAVSVFPVSAPFAGTVIEKTAVLGELAQPDKSLFTVA
HHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
DLSVVWIEANLFEKDLGKIKVGATVGVSVAAYPDELFKGRLTYISSVMDKESRTIKARVE
CEEEEEEECCHHHHCCCCEEECCEECEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEE
VANADGRLKPDMFANAAIDTATAGKALTVPTSAVLLLEGKKTVFVREKEGFEKREVELGD
EECCCCCCCCHHHHCCCCCCCCCCCEEECCCEEEEEEECCEEEEEECCCCCCHHHHCCCC
NLGGRFVVKEGIEAGEAVVVEGAYALKARLLKSKIGDHD
CCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMTRTLTAAALVLLLTLAACGRNAPEAKPATESQTVAPEKTAANDKEAASEAPEAGQIHL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCCEEEE
TEADIKAAGIRTEEANEAEVHERIAVTATIQANQDRLAHVVPRVPGRLVGITAKLGDRVK
EECCCCCCCCCCCCCCHHHHHHEEEEEEEEECCHHHHHHHHCCCCCEEEEEEHHHCCCHH
AGQTLASLDSIEIGEAHSAYLQADSQFRLAQADFERAEKLHAEQIVPEKDYLRSRSELEK
HCCHHHHCCCEECCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ARANLRAATDKLRLMGVPPARSESAVSVFPVSAPFAGTVIEKTAVLGELAQPDKSLFTVA
HHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
DLSVVWIEANLFEKDLGKIKVGATVGVSVAAYPDELFKGRLTYISSVMDKESRTIKARVE
CEEEEEEECCHHHHCCCCEEECCEECEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEE
VANADGRLKPDMFANAAIDTATAGKALTVPTSAVLLLEGKKTVFVREKEGFEKREVELGD
EECCCCCCCCHHHHCCCCCCCCCCCEEECCCEEEEEEECCEEEEEECCCCCCHHHHCCCC
NLGGRFVVKEGIEAGEAVVVEGAYALKARLLKSKIGDHD
CCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8829543 [H]