Click here to switch to the map view.

The map label for this gene is 71908150

Identifier: 71908150

GI number: 71908150

Start: 2730575

End: 2730988

Strand: Reverse

Name: 71908150

Synonym: Daro_2534

Alternate gene names: NA

Gene position: 2730988-2730575 (Counterclockwise)

Preceding gene: 71908151

Following gene: 71908149

Centisome position: 60.67

GC content: 55.8

Gene sequence:

>414_bases
GTGTTTCTTCTCGATACCAATGTCGTCTCGGAACTGCGCAAGCCGAAGCCACATGGGGCCGTCGTGGCGTGGCTGGAATC
GGTCGACGATGCGCACTTGTTTCTCTCTGCCGTTACCTTGGGTGAAATTCAGGCGGGTATCGAACTGACCCGTGAGCAAG
ACGCGGCAAAAGCATCGGAAATCGAGGCTTGGCTGGCGCAGGTCGCATCGGCCTACAATATCCTGCCGATGGATGCGGCA
GCTTTCCGGTGCTGGGCAAAGCTCATGCACCGCAAATCGGATACGTTGTACGAGGATGCCATGATTGCAGCGACCGCGTT
GGTTCATGGCCTTACCGTGGTGACCAGAAATACTGCCGATTACAAGGCGATAGGTATTGAGACCTTCAACCCATTCCAAT
GTTGGGGGGCTTAG

Upstream 100 bases:

>100_bases
TTTGAAAGCGCTTTTGCTGTCCGTTCAGCCTCGCGGCGAAATCGGAATACCGCCACGGGGACGAGCCAGGCGTCGCAGCG
TTGCCGAGATCGGGTGAGCG

Downstream 100 bases:

>100_bases
GGTGGCGCGCTGTTTCCTCGATCACATCACCGTTACCGCCTTCTCCCTTGACGCAGGCGCTGCCTTCGTTCTTGAGACCC
TTGGTGTTTTCCCGCAGGTC

Product: PilT protein, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFLLDTNVVSELRKPKPHGAVVAWLESVDDAHLFLSAVTLGEIQAGIELTREQDAAKASEIEAWLAQVASAYNILPMDAA
AFRCWAKLMHRKSDTLYEDAMIAATALVHGLTVVTRNTADYKAIGIETFNPFQCWGA

Sequences:

>Translated_137_residues
MFLLDTNVVSELRKPKPHGAVVAWLESVDDAHLFLSAVTLGEIQAGIELTREQDAAKASEIEAWLAQVASAYNILPMDAA
AFRCWAKLMHRKSDTLYEDAMIAATALVHGLTVVTRNTADYKAIGIETFNPFQCWGA
>Mature_137_residues
MFLLDTNVVSELRKPKPHGAVVAWLESVDDAHLFLSAVTLGEIQAGIELTREQDAAKASEIEAWLAQVASAYNILPMDAA
AFRCWAKLMHRKSDTLYEDAMIAATALVHGLTVVTRNTADYKAIGIETFNPFQCWGA

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15035; Mature: 15035

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLDTNVVSELRKPKPHGAVVAWLESVDDAHLFLSAVTLGEIQAGIELTREQDAAKASE
CEEECHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAWLAQVASAYNILPMDAAAFRCWAKLMHRKSDTLYEDAMIAATALVHGLTVVTRNTAD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
YKAIGIETFNPFQCWGA
EEEEECCCCCCEECCCC
>Mature Secondary Structure
MFLLDTNVVSELRKPKPHGAVVAWLESVDDAHLFLSAVTLGEIQAGIELTREQDAAKASE
CEEECHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAWLAQVASAYNILPMDAAAFRCWAKLMHRKSDTLYEDAMIAATALVHGLTVVTRNTAD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
YKAIGIETFNPFQCWGA
EEEEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]