| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71908149
Identifier: 71908149
GI number: 71908149
Start: 2729854
End: 2730573
Strand: Reverse
Name: 71908149
Synonym: Daro_2533
Alternate gene names: NA
Gene position: 2730573-2729854 (Counterclockwise)
Preceding gene: 71908150
Following gene: 71908148
Centisome position: 60.66
GC content: 62.36
Gene sequence:
>720_bases GTGGCGCGCTGTTTCCTCGATCACATCACCGTTACCGCCTTCTCCCTTGACGCAGGCGCTGCCTTCGTTCTTGAGACCCT TGGTGTTTTCCCGCAGGTCGGCGGCGAGCACCCGCGCATGGCAACCCACAACCTGTTGCTGCGCCTCGGCGACTCCACGT TCCTTGAGGTTATCGCGCCAAATCCTGCGGTCCCTGCGGCTTCGCGGCCTCGCTGGTTTGCCCTTGATAGCATCGGCTCT CAGTCGCCGCCGTCCCTCTCCACGTGGGTGGTTCGCACTTCAGATATCCGTGCCACTGTTGCCGCCTCCTCCGAACCACT TGGAAATGTCGAGCCCATGAGTCGTGGTGCGCTCAACTGGTTCATTACCATTCCCGCTGACGGTTCAGTTCCGCTGGACG GTATTGCGCCGGCGCTAATCGAGTGGCACACCGATGTTCATCCCGCCGCCAAGCTTGAAGATAAGGGGCTCTCTCTTGTC AAACTTGAGATCATGCACCCAAACCCCGACCGTGTCTCTCGGTTGCTTTCATCGCTGGAGCTTGATGCTCCGGTATCCGT GCTGTCGGCGCCGTCTGGTGAATCGGCGCGTTTGGTCGCGCACATCAACACACCCCAGGGGCTTCGTCTCCTGTCTGCCC ACCAACCCCTCGTTCCAGGGGACCGCCGGCAAGCTGCGCTTGCCGGTTCGCTCCGGGCTGCGCCCTCCGCCGGCCCCTGA
Upstream 100 bases:
>100_bases GCGTTGGTTCATGGCCTTACCGTGGTGACCAGAAATACTGCCGATTACAAGGCGATAGGTATTGAGACCTTCAACCCATT CCAATGTTGGGGGGCTTAGG
Downstream 100 bases:
>100_bases ACTCAAACGATGGATGTGCCTTGGGGCAGTTGGGCCTGAATTAAGCAAGCGAGAGGTGATCTGTGATTGACCATCCCATC ATCAAGCAGTTTGAAGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MARCFLDHITVTAFSLDAGAAFVLETLGVFPQVGGEHPRMATHNLLLRLGDSTFLEVIAPNPAVPAASRPRWFALDSIGS QSPPSLSTWVVRTSDIRATVAASSEPLGNVEPMSRGALNWFITIPADGSVPLDGIAPALIEWHTDVHPAAKLEDKGLSLV KLEIMHPNPDRVSRLLSSLELDAPVSVLSAPSGESARLVAHINTPQGLRLLSAHQPLVPGDRRQAALAGSLRAAPSAGP
Sequences:
>Translated_239_residues MARCFLDHITVTAFSLDAGAAFVLETLGVFPQVGGEHPRMATHNLLLRLGDSTFLEVIAPNPAVPAASRPRWFALDSIGS QSPPSLSTWVVRTSDIRATVAASSEPLGNVEPMSRGALNWFITIPADGSVPLDGIAPALIEWHTDVHPAAKLEDKGLSLV KLEIMHPNPDRVSRLLSSLELDAPVSVLSAPSGESARLVAHINTPQGLRLLSAHQPLVPGDRRQAALAGSLRAAPSAGP >Mature_238_residues ARCFLDHITVTAFSLDAGAAFVLETLGVFPQVGGEHPRMATHNLLLRLGDSTFLEVIAPNPAVPAASRPRWFALDSIGSQ SPPSLSTWVVRTSDIRATVAASSEPLGNVEPMSRGALNWFITIPADGSVPLDGIAPALIEWHTDVHPAAKLEDKGLSLVK LEIMHPNPDRVSRLLSSLELDAPVSVLSAPSGESARLVAHINTPQGLRLLSAHQPLVPGDRRQAALAGSLRAAPSAGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25219; Mature: 25088
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARCFLDHITVTAFSLDAGAAFVLETLGVFPQVGGEHPRMATHNLLLRLGDSTFLEVIAP CCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCEEEEEECC NPAVPAASRPRWFALDSIGSQSPPSLSTWVVRTSDIRATVAASSEPLGNVEPMSRGALNW CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEE FITIPADGSVPLDGIAPALIEWHTDVHPAAKLEDKGLSLVKLEIMHPNPDRVSRLLSSLE EEEECCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC LDAPVSVLSAPSGESARLVAHINTPQGLRLLSAHQPLVPGDRRQAALAGSLRAAPSAGP CCCCHHEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure ARCFLDHITVTAFSLDAGAAFVLETLGVFPQVGGEHPRMATHNLLLRLGDSTFLEVIAP CCEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCEEEEEECC NPAVPAASRPRWFALDSIGSQSPPSLSTWVVRTSDIRATVAASSEPLGNVEPMSRGALNW CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEE FITIPADGSVPLDGIAPALIEWHTDVHPAAKLEDKGLSLVKLEIMHPNPDRVSRLLSSLE EEEECCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC LDAPVSVLSAPSGESARLVAHINTPQGLRLLSAHQPLVPGDRRQAALAGSLRAAPSAGP CCCCHHEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA