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The map label for this gene is ywhC [H]

Identifier: 71908078

GI number: 71908078

Start: 2660401

End: 2661054

Strand: Reverse

Name: ywhC [H]

Synonym: Daro_2460

Alternate gene names: 71908078

Gene position: 2661054-2660401 (Counterclockwise)

Preceding gene: 71908079

Following gene: 71908077

Centisome position: 59.12

GC content: 57.49

Gene sequence:

>654_bases
ATGCTCGAAAGCCTGATCCAGACCCTCGCCATATCGGCTCTGCCGGTGATTTTTGCAATCACGCTGCACGAAGCGGCACA
CGGCTATGCGGCACGACATTTCGGCGATCCGACCGCCTGGATGCAGGGGCGCATCAGCCTGAATCCGCTGCGCCACATCG
ATCTGGTCGGCACCATTATCATCCCGATTACTATCCTGCTCTTTTCGGGTGGTACCTTCCTGTTCGGCTACGCCAAGCCG
GTACCAGTCGATTTCAGTCGCCTGCGCAAACCCAAACAGGACATGTTCTGGGTGGCTGCCGCCGGTCCTGGAGCCAACCT
TTTCATGGCTTTCGTCTGGGCTGCCTTGCTCAAGCTGGCCTGGCTGCTGCCAAGCAGCGAATACACGCTGCCGCTCTCCG
AAATGAGCAAGATCGGCATCATGGTCAATTGCGTGCTGATGGTGCTCAATCTGCTGCCCCTGCCGCCGCTTGATGGTGGC
CGCATCGCGGTCAGCCTGCTACCGCATCAGCTGGCATGGAAGTTTGCCCAGCTCGAACGCTGGGGTTTTCCGATTTTGCT
GCTCCTGTTATTCACCGGTATCCTCGGTGCTGTCATGAACCCGCTGGTTGTTTTGTCAGCCCGGGCGATCGAGTTAATTT
TTGGTCTTTACTAA

Upstream 100 bases:

>100_bases
ACTGAGCCGACAACCGTCATCGATCTGACCGGTTCGGCACCCGAGCTGATTCGCGCCGGCCGCGGTCCGCTCGAAATCTT
CGGTCTGGGCTAAAGGGCCC

Downstream 100 bases:

>100_bases
ATAATCTATGTACGCAGAACGTGTTCTCTCCGGCATGCGCCCAACCGGGTCGCTGCACCTTGGCCACTATCACGGTGTTC
TCAAGAACTGGGTCAAGCTC

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLESLIQTLAISALPVIFAITLHEAAHGYAARHFGDPTAWMQGRISLNPLRHIDLVGTIIIPITILLFSGGTFLFGYAKP
VPVDFSRLRKPKQDMFWVAAAGPGANLFMAFVWAALLKLAWLLPSSEYTLPLSEMSKIGIMVNCVLMVLNLLPLPPLDGG
RIAVSLLPHQLAWKFAQLERWGFPILLLLLFTGILGAVMNPLVVLSARAIELIFGLY

Sequences:

>Translated_217_residues
MLESLIQTLAISALPVIFAITLHEAAHGYAARHFGDPTAWMQGRISLNPLRHIDLVGTIIIPITILLFSGGTFLFGYAKP
VPVDFSRLRKPKQDMFWVAAAGPGANLFMAFVWAALLKLAWLLPSSEYTLPLSEMSKIGIMVNCVLMVLNLLPLPPLDGG
RIAVSLLPHQLAWKFAQLERWGFPILLLLLFTGILGAVMNPLVVLSARAIELIFGLY
>Mature_217_residues
MLESLIQTLAISALPVIFAITLHEAAHGYAARHFGDPTAWMQGRISLNPLRHIDLVGTIIIPITILLFSGGTFLFGYAKP
VPVDFSRLRKPKQDMFWVAAAGPGANLFMAFVWAALLKLAWLLPSSEYTLPLSEMSKIGIMVNCVLMVLNLLPLPPLDGG
RIAVSLLPHQLAWKFAQLERWGFPILLLLLFTGILGAVMNPLVVLSARAIELIFGLY

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23840; Mature: 23840

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESLIQTLAISALPVIFAITLHEAAHGYAARHFGDPTAWMQGRISLNPLRHIDLVGTII
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHH
IPITILLFSGGTFLFGYAKPVPVDFSRLRKPKQDMFWVAAAGPGANLFMAFVWAALLKLA
HHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHH
WLLPSSEYTLPLSEMSKIGIMVNCVLMVLNLLPLPPLDGGRIAVSLLPHQLAWKFAQLER
HHCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHH
WGFPILLLLLFTGILGAVMNPLVVLSARAIELIFGLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLESLIQTLAISALPVIFAITLHEAAHGYAARHFGDPTAWMQGRISLNPLRHIDLVGTII
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHH
IPITILLFSGGTFLFGYAKPVPVDFSRLRKPKQDMFWVAAAGPGANLFMAFVWAALLKLA
HHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHH
WLLPSSEYTLPLSEMSKIGIMVNCVLMVLNLLPLPPLDGGRIAVSLLPHQLAWKFAQLER
HHCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHH
WGFPILLLLLFTGILGAVMNPLVVLSARAIELIFGLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]