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The map label for this gene is rnfH [H]

Identifier: 71907959

GI number: 71907959

Start: 2522374

End: 2522700

Strand: Reverse

Name: rnfH [H]

Synonym: Daro_2340

Alternate gene names: 71907959

Gene position: 2522700-2522374 (Counterclockwise)

Preceding gene: 71907960

Following gene: 71907957

Centisome position: 56.05

GC content: 50.76

Gene sequence:

>327_bases
ATGGCTGAAATGCTGAATATTGAAGTTTGCTACGCCCTGCCCAACAAGCAGGAGCTCGTTCGTGTGAAATTGCCGGAAGG
TGCATTGGTGCAGCAAGCGCTTGAGGCTTCCGGTCTGTTGGATAAGTACCCTGAGATCGATCTCAAAAAGAACAAGTTTG
GTATCTGGAACAAACTTTCCAAAGTCGATTCGGTGTTACGCGACAAGGATCGCGTCGAAATCTATCTGCCACTGATTGCT
GATCCCAAAGAAGTCCGCAAGCAACGTGCGGCCGAGGGGAAGGTCATGAAAAAAGGCGCCGGTGATTCCGACGCCGCCGA
GAGTTAA

Upstream 100 bases:

>100_bases
AAGTTGTTCGAGAAAGTGATTGGCCCTGTTTTTAGCCATATCGCGAACACGTTTGTCGACGCTTTTGTGCGTCGTGCTGC
ACAGGTCTATGGAGTCAGCC

Downstream 100 bases:

>100_bases
CGCGGACTTCCTTATTTGCAGTACTCGGCGACCGCCCTGCGGGCACGGTCCAATTCCTGTTCGCGCTGAGCGCTATCCAT
CTGTGTCTGTTGACCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAEMLNIEVCYALPNKQELVRVKLPEGALVQQALEASGLLDKYPEIDLKKNKFGIWNKLSKVDSVLRDKDRVEIYLPLIA
DPKEVRKQRAAEGKVMKKGAGDSDAAES

Sequences:

>Translated_108_residues
MAEMLNIEVCYALPNKQELVRVKLPEGALVQQALEASGLLDKYPEIDLKKNKFGIWNKLSKVDSVLRDKDRVEIYLPLIA
DPKEVRKQRAAEGKVMKKGAGDSDAAES
>Mature_107_residues
AEMLNIEVCYALPNKQELVRVKLPEGALVQQALEASGLLDKYPEIDLKKNKFGIWNKLSKVDSVLRDKDRVEIYLPLIAD
PKEVRKQRAAEGKVMKKGAGDSDAAES

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=90, Percent_Identity=56.6666666666667, Blast_Score=101, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 12068; Mature: 11937

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMLNIEVCYALPNKQELVRVKLPEGALVQQALEASGLLDKYPEIDLKKNKFGIWNKLS
CCCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
KVDSVLRDKDRVEIYLPLIADPKEVRKQRAAEGKVMKKGAGDSDAAES
HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
AEMLNIEVCYALPNKQELVRVKLPEGALVQQALEASGLLDKYPEIDLKKNKFGIWNKLS
CCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
KVDSVLRDKDRVEIYLPLIADPKEVRKQRAAEGKVMKKGAGDSDAAES
HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA