| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907952
Identifier: 71907952
GI number: 71907952
Start: 2514300
End: 2515244
Strand: Reverse
Name: 71907952
Synonym: Daro_2333
Alternate gene names: NA
Gene position: 2515244-2514300 (Counterclockwise)
Preceding gene: 71907953
Following gene: 71907951
Centisome position: 55.88
GC content: 59.26
Gene sequence:
>945_bases GTGAGCGACTATTTCAGTGACCGAGAAAATGGGCCGCGGGCGCGAACCGAGCAGGTGATTTCACCCGCCGTTTGGGCGGG CTTGGTGGCAACGGTACAGGCCCTGATCAACAGCGGGGCCTTCGGGTTGCGTTTTCCCGAGCGCTGTCCAGATGGACAAG CCGTTTGCGGTTGCGATACGGATGCTCTGGCCGCTTCCGTGATTGCGGAGATGCCGGGGTTGGCTTGGCCGCTCGAAACC ATGTGTCTGGTGGAAGAAGGTTTCCTGTCGCAGCGAGAGCCCTTTGCGCCGGACACGCTGCTCATCATGGATTTCATCGA GTTCATCTACGCTTCGGTGGCGAAGCCGATTCCCGGGAAACACCACGATTTCTTCAGCCACCACCATTTGACCTTCGACC AACAGTCGGGACAGGAAGAGTTCCGGGCGACCGTAAATCGCATCTTTTCGCGCAACGGCGTGGCCTTCGAGATGTTGTCG ACCGGCCGCATCATGCGCGTGCTTCCGCCGGTGCTTGGGGAAGAATTGAAGCGGACAATTTTTCGGACTGGAGACCGGAC CCTCGATAACATGTTGGATGAATGTCGGGCCAAGTTTTCTGACCGGAGTCCCCTGGTACGGCGCGAGGCCTTGGAGCGCT TGTGGGATGGGTGGGAGCGGCTCAAGTCTCTTGCGGACCCCGGCGACAAGAAGAGGTCTATCAAGATCATTCTTGATGCC ACCGCCGCCGAGCCATCACTCCGGGCACGAATGGAGGAAGAGGCCACAGAACTGACGTCCATCGGCAACAGCCATCTCAT TCGGCACTCGGAGGTCAGTCAGGTGCCCGTCATCGATGTGGATCAAGTCGATTACCTGTTCCATCGGCTGTTCGCGATGA TCCAGTTGGTATTGAGGAAGCAGGGCCCCGTATCGGAGATCGGCCGGGGCGGCGGGTCTTGGTAG
Upstream 100 bases:
>100_bases TTCCCGCACTTAGTGCGGTACTGTCCAGCATCGAACGATTTGAAGAGATCGTAAACAGCGCGGTAGTTGCAGAGACACTG TTGCAGAAAGAACCACGCAC
Downstream 100 bases:
>100_bases TGGAAATGTTAGCTGGATAGGTCGCCATAGGCTTGCAACCAATGCCACCAGAGCTACTCTGAATTCAAGAGGCAGAGATG AGAAAATTCATTTTTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSDYFSDRENGPRARTEQVISPAVWAGLVATVQALINSGAFGLRFPERCPDGQAVCGCDTDALAASVIAEMPGLAWPLET MCLVEEGFLSQREPFAPDTLLIMDFIEFIYASVAKPIPGKHHDFFSHHHLTFDQQSGQEEFRATVNRIFSRNGVAFEMLS TGRIMRVLPPVLGEELKRTIFRTGDRTLDNMLDECRAKFSDRSPLVRREALERLWDGWERLKSLADPGDKKRSIKIILDA TAAEPSLRARMEEEATELTSIGNSHLIRHSEVSQVPVIDVDQVDYLFHRLFAMIQLVLRKQGPVSEIGRGGGSW
Sequences:
>Translated_314_residues MSDYFSDRENGPRARTEQVISPAVWAGLVATVQALINSGAFGLRFPERCPDGQAVCGCDTDALAASVIAEMPGLAWPLET MCLVEEGFLSQREPFAPDTLLIMDFIEFIYASVAKPIPGKHHDFFSHHHLTFDQQSGQEEFRATVNRIFSRNGVAFEMLS TGRIMRVLPPVLGEELKRTIFRTGDRTLDNMLDECRAKFSDRSPLVRREALERLWDGWERLKSLADPGDKKRSIKIILDA TAAEPSLRARMEEEATELTSIGNSHLIRHSEVSQVPVIDVDQVDYLFHRLFAMIQLVLRKQGPVSEIGRGGGSW >Mature_313_residues SDYFSDRENGPRARTEQVISPAVWAGLVATVQALINSGAFGLRFPERCPDGQAVCGCDTDALAASVIAEMPGLAWPLETM CLVEEGFLSQREPFAPDTLLIMDFIEFIYASVAKPIPGKHHDFFSHHHLTFDQQSGQEEFRATVNRIFSRNGVAFEMLST GRIMRVLPPVLGEELKRTIFRTGDRTLDNMLDECRAKFSDRSPLVRREALERLWDGWERLKSLADPGDKKRSIKIILDAT AAEPSLRARMEEEATELTSIGNSHLIRHSEVSQVPVIDVDQVDYLFHRLFAMIQLVLRKQGPVSEIGRGGGSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35229; Mature: 35097
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYFSDRENGPRARTEQVISPAVWAGLVATVQALINSGAFGLRFPERCPDGQAVCGCDT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCH DALAASVIAEMPGLAWPLETMCLVEEGFLSQREPFAPDTLLIMDFIEFIYASVAKPIPGK HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC HHDFFSHHHLTFDQQSGQEEFRATVNRIFSRNGVAFEMLSTGRIMRVLPPVLGEELKRTI CCCHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHHHHHHHHHHH FRTGDRTLDNMLDECRAKFSDRSPLVRREALERLWDGWERLKSLADPGDKKRSIKIILDA HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC TAAEPSLRARMEEEATELTSIGNSHLIRHSEVSQVPVIDVDQVDYLFHRLFAMIQLVLRK CCCCHHHHHHHHHHHHHHHHCCCHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC QGPVSEIGRGGGSW CCCHHHHCCCCCCC >Mature Secondary Structure SDYFSDRENGPRARTEQVISPAVWAGLVATVQALINSGAFGLRFPERCPDGQAVCGCDT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCH DALAASVIAEMPGLAWPLETMCLVEEGFLSQREPFAPDTLLIMDFIEFIYASVAKPIPGK HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC HHDFFSHHHLTFDQQSGQEEFRATVNRIFSRNGVAFEMLSTGRIMRVLPPVLGEELKRTI CCCHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHHHHHHHHHHH FRTGDRTLDNMLDECRAKFSDRSPLVRREALERLWDGWERLKSLADPGDKKRSIKIILDA HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC TAAEPSLRARMEEEATELTSIGNSHLIRHSEVSQVPVIDVDQVDYLFHRLFAMIQLVLRK CCCCHHHHHHHHHHHHHHHHCCCHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC QGPVSEIGRGGGSW CCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA