Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907953

Identifier: 71907953

GI number: 71907953

Start: 2515241

End: 2516320

Strand: Reverse

Name: 71907953

Synonym: Daro_2334

Alternate gene names: NA

Gene position: 2516320-2515241 (Counterclockwise)

Preceding gene: 71907954

Following gene: 71907952

Centisome position: 55.9

GC content: 60.09

Gene sequence:

>1080_bases
TTGAACCCTTCATTTCACGATGTCATCACCGCTGCCGATGGTGATCGACTCGATTTGTTTCTCGGCGCAGCCACGCGTTT
GGGTACGGCGGTTCAGAACGTCGAGAAGGACTTCTGGGTCTGCTGGACACTGGATGCCTTGTTCAACGGATTGGCTACTG
GCGGACCTCGGCTCTTGTTCAAGGGGGGCACTTCCCTGTCCAAGGCCTTCGGCCTGATCTCCCGCTTCTCCGAGGACATC
GACATCACGGTTTTCCGTGGCGATCTGGGACAGGCCGCTGAGGTGGCAGAACTGGACGCCTTGAGCGGCAAGAAGCGCCG
GGCTCGTCTTGAAGCCATCCGGCTGGCTTGTCAAGCCTACATCGCCGGCCCATTGGCGGATGAATTCACTCAGATCGCCG
CTGCCGTCATTCCCGATGGCCGCTTCCGCCTGGAACTCGATCCGGACGACAAAGACGGCCAAACCCTGCTGTTTTGGTAT
CCCGCCGTCACGCCCACGACCAACGACTACATCCATTCCGCCGTGAAAATCGAGTCCGGCGCGAAGTCGGCACTCGACCC
CCACATTGCGGCAACGGTCACGCCATACGTTGCGCAGGACTTGCCCGCGCTGGATCTCACCGTAAGCAACGTGATCACCG
TAAAGCCGGAGCGCACCTTCTGGGACAAGGTCATCATCCTGCATGGCTTGCGGCAGTGGCACGACCGTCGCGGAGAACTG
CGGCACGGCGGGCAGCGCGTCTCGCGCCACTATTACGATGTGCACCAACTGATGCAGGCAAGCGCATCGCCCGAGTGGCA
GGCCGATCAGGCACTCGCTATAGATTGCGCTCACCACGCCAGGCTTTTCTTCGGTAGCGCCGATCTGGGCCTGGAGGCAG
CCCAACCCGGGTCCTTCACGTTGAGCCCGAGTGCGGCCATGCATGAGGCGTTATCCAGGGATTACGAAGCCATGGCCGGC
ATGGTCTTCGGGGAAATTCCCGCACTTAGTGCGGTACTGTCCAGCATCGAACGATTTGAAGAGATCGTAAACAGCGCGGT
AGTTGCAGAGACACTGTTGCAGAAAGAACCACGCACGTGA

Upstream 100 bases:

>100_bases
GTTGCGATCCACTTGGGGCCGTACCCATGACCTTGCAGGCGCCTAGCGGCGTGAAGCCCCCGGCAGATTCATCTTGGGCC
AAGGGCATCAGGGGGGGACG

Downstream 100 bases:

>100_bases
GCGACTATTTCAGTGACCGAGAAAATGGGCCGCGGGCGCGAACCGAGCAGGTGATTTCACCCGCCGTTTGGGCGGGCTTG
GTGGCAACGGTACAGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MNPSFHDVITAADGDRLDLFLGAATRLGTAVQNVEKDFWVCWTLDALFNGLATGGPRLLFKGGTSLSKAFGLISRFSEDI
DITVFRGDLGQAAEVAELDALSGKKRRARLEAIRLACQAYIAGPLADEFTQIAAAVIPDGRFRLELDPDDKDGQTLLFWY
PAVTPTTNDYIHSAVKIESGAKSALDPHIAATVTPYVAQDLPALDLTVSNVITVKPERTFWDKVIILHGLRQWHDRRGEL
RHGGQRVSRHYYDVHQLMQASASPEWQADQALAIDCAHHARLFFGSADLGLEAAQPGSFTLSPSAAMHEALSRDYEAMAG
MVFGEIPALSAVLSSIERFEEIVNSAVVAETLLQKEPRT

Sequences:

>Translated_359_residues
MNPSFHDVITAADGDRLDLFLGAATRLGTAVQNVEKDFWVCWTLDALFNGLATGGPRLLFKGGTSLSKAFGLISRFSEDI
DITVFRGDLGQAAEVAELDALSGKKRRARLEAIRLACQAYIAGPLADEFTQIAAAVIPDGRFRLELDPDDKDGQTLLFWY
PAVTPTTNDYIHSAVKIESGAKSALDPHIAATVTPYVAQDLPALDLTVSNVITVKPERTFWDKVIILHGLRQWHDRRGEL
RHGGQRVSRHYYDVHQLMQASASPEWQADQALAIDCAHHARLFFGSADLGLEAAQPGSFTLSPSAAMHEALSRDYEAMAG
MVFGEIPALSAVLSSIERFEEIVNSAVVAETLLQKEPRT
>Mature_359_residues
MNPSFHDVITAADGDRLDLFLGAATRLGTAVQNVEKDFWVCWTLDALFNGLATGGPRLLFKGGTSLSKAFGLISRFSEDI
DITVFRGDLGQAAEVAELDALSGKKRRARLEAIRLACQAYIAGPLADEFTQIAAAVIPDGRFRLELDPDDKDGQTLLFWY
PAVTPTTNDYIHSAVKIESGAKSALDPHIAATVTPYVAQDLPALDLTVSNVITVKPERTFWDKVIILHGLRQWHDRRGEL
RHGGQRVSRHYYDVHQLMQASASPEWQADQALAIDCAHHARLFFGSADLGLEAAQPGSFTLSPSAAMHEALSRDYEAMAG
MVFGEIPALSAVLSSIERFEEIVNSAVVAETLLQKEPRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39229; Mature: 39229

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSFHDVITAADGDRLDLFLGAATRLGTAVQNVEKDFWVCWTLDALFNGLATGGPRLLF
CCCCHHHEEEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCEEEE
KGGTSLSKAFGLISRFSEDIDITVFRGDLGQAAEVAELDALSGKKRRARLEAIRLACQAY
ECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IAGPLADEFTQIAAAVIPDGRFRLELDPDDKDGQTLLFWYPAVTPTTNDYIHSAVKIESG
HCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCC
AKSALDPHIAATVTPYVAQDLPALDLTVSNVITVKPERTFWDKVIILHGLRQWHDRRGEL
CCCCCCCCHHHEECHHHHHCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHCCHH
RHGGQRVSRHYYDVHQLMQASASPEWQADQALAIDCAHHARLFFGSADLGLEAAQPGSFT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHEEEECCCCCCCCCCCCCCEE
LSPSAAMHEALSRDYEAMAGMVFGEIPALSAVLSSIERFEEIVNSAVVAETLLQKEPRT
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNPSFHDVITAADGDRLDLFLGAATRLGTAVQNVEKDFWVCWTLDALFNGLATGGPRLLF
CCCCHHHEEEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCEEEE
KGGTSLSKAFGLISRFSEDIDITVFRGDLGQAAEVAELDALSGKKRRARLEAIRLACQAY
ECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IAGPLADEFTQIAAAVIPDGRFRLELDPDDKDGQTLLFWYPAVTPTTNDYIHSAVKIESG
HCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCC
AKSALDPHIAATVTPYVAQDLPALDLTVSNVITVKPERTFWDKVIILHGLRQWHDRRGEL
CCCCCCCCHHHEECHHHHHCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHCCHH
RHGGQRVSRHYYDVHQLMQASASPEWQADQALAIDCAHHARLFFGSADLGLEAAQPGSFT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHEEEECCCCCCCCCCCCCCEE
LSPSAAMHEALSRDYEAMAGMVFGEIPALSAVLSSIERFEEIVNSAVVAETLLQKEPRT
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA