| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907919
Identifier: 71907919
GI number: 71907919
Start: 2482252
End: 2482704
Strand: Reverse
Name: 71907919
Synonym: Daro_2300
Alternate gene names: NA
Gene position: 2482704-2482252 (Counterclockwise)
Preceding gene: 71907920
Following gene: 71907918
Centisome position: 55.16
GC content: 57.84
Gene sequence:
>453_bases ATGCGCCATCATCATTCGCTGATCCGCCCCGTTGCTGCAATATCGGCCATCGTTCTCTTGGCCCTTGCGGCTGGATGCTC AAAGTCCACCGACGCCGGTACAGCAGGCTCTGCCTCAATAGCGACAAGTCAGACCACCTCCGCGCCGCAGGCAAAGGCCG CGTCCAAATTAGGGGATTTGTCTGCATTTCGGAACATCGCCGCAGACGTCTCCGTCATCGTGGATAAGGGCGATCTGCCA ACAGCGAAAGCACGGATCAAAGATTTGGAGGTTGCATGGGACTCGGCGGAGGCGGGCTTGAAGCCTCGTGCAGCGGATGA CTGGCACAGGCTCGACAAGGCCATTGACCCTGCCCTTAGCGCGCTGCGTGCAGATGCACCCAATCAAACCGACTGCAAAA AGGCGATGGCTGATCTATTGAGCACTTTCGACTCGCTACAAGCGAAGCTCTGA
Upstream 100 bases:
>100_bases GTGATTGTGATGTTGGTCGCCGTTGCGCAGTTCAGCGTTGGCCGCCGCATGAATGCACAAGCCGCCGAATAACCTCTACC CAATAACTCAAGGAAAAAAC
Downstream 100 bases:
>100_bases CCAGAGAAAACGAATCAATATGAATATTTCAGCAGAAAAAGCCCTGAGCAAAGTCCCAGAGGTCACTCTCGTTTTTTGGA TCATCAAGATTGCGGCCACC
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRHHHSLIRPVAAISAIVLLALAAGCSKSTDAGTAGSASIATSQTTSAPQAKAASKLGDLSAFRNIAADVSVIVDKGDLP TAKARIKDLEVAWDSAEAGLKPRAADDWHRLDKAIDPALSALRADAPNQTDCKKAMADLLSTFDSLQAKL
Sequences:
>Translated_150_residues MRHHHSLIRPVAAISAIVLLALAAGCSKSTDAGTAGSASIATSQTTSAPQAKAASKLGDLSAFRNIAADVSVIVDKGDLP TAKARIKDLEVAWDSAEAGLKPRAADDWHRLDKAIDPALSALRADAPNQTDCKKAMADLLSTFDSLQAKL >Mature_150_residues MRHHHSLIRPVAAISAIVLLALAAGCSKSTDAGTAGSASIATSQTTSAPQAKAASKLGDLSAFRNIAADVSVIVDKGDLP TAKARIKDLEVAWDSAEAGLKPRAADDWHRLDKAIDPALSALRADAPNQTDCKKAMADLLSTFDSLQAKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15556; Mature: 15556
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHHHSLIRPVAAISAIVLLALAAGCSKSTDAGTAGSASIATSQTTSAPQAKAASKLGDL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SAFRNIAADVSVIVDKGDLPTAKARIKDLEVAWDSAEAGLKPRAADDWHRLDKAIDPALS HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHH ALRADAPNQTDCKKAMADLLSTFDSLQAKL HHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRHHHSLIRPVAAISAIVLLALAAGCSKSTDAGTAGSASIATSQTTSAPQAKAASKLGDL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SAFRNIAADVSVIVDKGDLPTAKARIKDLEVAWDSAEAGLKPRAADDWHRLDKAIDPALS HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHH ALRADAPNQTDCKKAMADLLSTFDSLQAKL HHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA