| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907918
Identifier: 71907918
GI number: 71907918
Start: 2481474
End: 2482232
Strand: Reverse
Name: 71907918
Synonym: Daro_2299
Alternate gene names: NA
Gene position: 2482232-2481474 (Counterclockwise)
Preceding gene: 71907919
Following gene: 71907917
Centisome position: 55.15
GC content: 52.04
Gene sequence:
>759_bases ATGAATATTTCAGCAGAAAAAGCCCTGAGCAAAGTCCCAGAGGTCACTCTCGTTTTTTGGATCATCAAGATTGCGGCCAC CACGCTCGGTGAAACAGGTGGCGATGCCGTTTCGATGTCTATGAATTTGGGCTACTTGATTGGTACGGTTATTTTCGCAG CCGTATTTTTGGCTGCGGTCTTTGCGCAAATCAAGGCCAAGACCTTTCAGCCATTCCTTTACTGGACAACCATCATTGCA ACCACCACGGTCGGCACGACACTGGCTGATTATGCTGACCGATCCCTCGGTATTGGGTACGCGGGTGGCTCGACCTTGCT TATGGCTTTGTTGTTCGGTTCACTATTTATATGGCATCGAACGCTAGGCTCAGTTTCGGTTAGCACGGTCAGTTCGTCGA AGGCCGAGATGTTCTATTGGGTGACCATCATGTTCTCCCAGACTTTGGGAACGGCACTGGGCGATTGGACGGCGGATACG GCAGGATTGGGTTACACCGGCGGCGCCATTGTGTTCAGCGGGCTTTTGGCCTTGGTCGTTGCAGCTTACTATTGGACAAA TGTGTCGCGAACCCTACTTTTTTGGGCCGCATTCATTTTGACCCGCCCTCTCGGTGCCGTGGTGGGGGATTTTCTGGATA AGCCGCTCAGTGCAGGCGGGCTGGCCCTGAGTCGTTATTCAGCATCAGCGGCACTATTTGCCTTCATTTTGACTAGCATT TTGCTATTCAAGCAAAGAGCTGCCAGAACGGCGCACTGA
Upstream 100 bases:
>100_bases GATGCACCCAATCAAACCGACTGCAAAAAGGCGATGGCTGATCTATTGAGCACTTTCGACTCGCTACAAGCGAAGCTCTG ACCAGAGAAAACGAATCAAT
Downstream 100 bases:
>100_bases TTTACTGTTATCTATTGGAGGAGGAATGCGAGTATTGCTGGTCGAAGACGACTTCATGATTGGCGAAGCCATCCAAGGGG CGCTGAAAGACGCTTCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNISAEKALSKVPEVTLVFWIIKIAATTLGETGGDAVSMSMNLGYLIGTVIFAAVFLAAVFAQIKAKTFQPFLYWTTIIA TTTVGTTLADYADRSLGIGYAGGSTLLMALLFGSLFIWHRTLGSVSVSTVSSSKAEMFYWVTIMFSQTLGTALGDWTADT AGLGYTGGAIVFSGLLALVVAAYYWTNVSRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYSASAALFAFILTSI LLFKQRAARTAH
Sequences:
>Translated_252_residues MNISAEKALSKVPEVTLVFWIIKIAATTLGETGGDAVSMSMNLGYLIGTVIFAAVFLAAVFAQIKAKTFQPFLYWTTIIA TTTVGTTLADYADRSLGIGYAGGSTLLMALLFGSLFIWHRTLGSVSVSTVSSSKAEMFYWVTIMFSQTLGTALGDWTADT AGLGYTGGAIVFSGLLALVVAAYYWTNVSRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYSASAALFAFILTSI LLFKQRAARTAH >Mature_252_residues MNISAEKALSKVPEVTLVFWIIKIAATTLGETGGDAVSMSMNLGYLIGTVIFAAVFLAAVFAQIKAKTFQPFLYWTTIIA TTTVGTTLADYADRSLGIGYAGGSTLLMALLFGSLFIWHRTLGSVSVSTVSSSKAEMFYWVTIMFSQTLGTALGDWTADT AGLGYTGGAIVFSGLLALVVAAYYWTNVSRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYSASAALFAFILTSI LLFKQRAARTAH
Specific function: Unknown
COG id: COG4705
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26797; Mature: 26797
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISAEKALSKVPEVTLVFWIIKIAATTLGETGGDAVSMSMNLGYLIGTVIFAAVFLAAV CCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH FAQIKAKTFQPFLYWTTIIATTTVGTTLADYADRSLGIGYAGGSTLLMALLFGSLFIWHR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TLGSVSVSTVSSSKAEMFYWVTIMFSQTLGTALGDWTADTAGLGYTGGAIVFSGLLALVV HHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH AAYYWTNVSRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYSASAALFAFILTSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LLFKQRAARTAH HHHHHHHHCCCC >Mature Secondary Structure MNISAEKALSKVPEVTLVFWIIKIAATTLGETGGDAVSMSMNLGYLIGTVIFAAVFLAAV CCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH FAQIKAKTFQPFLYWTTIIATTTVGTTLADYADRSLGIGYAGGSTLLMALLFGSLFIWHR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TLGSVSVSTVSSSKAEMFYWVTIMFSQTLGTALGDWTADTAGLGYTGGAIVFSGLLALVV HHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH AAYYWTNVSRTLLFWAAFILTRPLGAVVGDFLDKPLSAGGLALSRYSASAALFAFILTSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LLFKQRAARTAH HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA