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The map label for this gene is qseB [H]

Identifier: 71907917

GI number: 71907917

Start: 2480783

End: 2481448

Strand: Reverse

Name: qseB [H]

Synonym: Daro_2298

Alternate gene names: 71907917

Gene position: 2481448-2480783 (Counterclockwise)

Preceding gene: 71907918

Following gene: 71907916

Centisome position: 55.13

GC content: 57.66

Gene sequence:

>666_bases
ATGCGAGTATTGCTGGTCGAAGACGACTTCATGATTGGCGAAGCCATCCAAGGGGCGCTGAAAGACGCTTCGTACGCTGC
CGACTGGGTAAAGAACGGCCAAACTGCCCTCACGACACTGGGTTGCCAGCACTATGACCTGGTGCTGCTCGATCTTGGCC
TTCCAGGTAAGGATGGGTTGGAGGTGCTGACCAGCATTCGCGCCAAAGACAATCCGGTTCCCCTTCTCATCATCACTGCC
CGCGACGGCCTCAATGATCGACTGCGCGGCTTGGATGGTGGAGCCGATGATTATTTGCTCAAACCTTTTGAGATGGCCGA
ACTGCTGGCCCGCATGCGTGCGGTGCTACGACGTAAGGGAGGAAATGCAACGTCCGTGCTCAGCAACGGCGTCGTGTCGC
TCGATCCGGCCACGCGGGAGGCGGCGGTCAACAACAGTGCCTCGGTGCAACTCTCCAATCGTGAGTTTGCCTTGTTGCAA
GCCTTGCTGGTACGCCCTGGAGCCATTCTCTCGCGCAGCGATCTGGAAGACCGTATCTACGGATGGGGTGAAGAGGTCGA
GAGCAACGCCGTCGAATTCCTGATCCATGCACTGCGGCGCAAGCTGGGCGGCGAAGTCATCAAGAATGTCAGGGGGGTTG
GATGGATGGTTTCAAAAAACGTCTGA

Upstream 100 bases:

>100_bases
TCAGCGGCACTATTTGCCTTCATTTTGACTAGCATTTTGCTATTCAAGCAAAGAGCTGCCAGAACGGCGCACTGATTTAC
TGTTATCTATTGGAGGAGGA

Downstream 100 bases:

>100_bases
ACGAGTCGGTTCAGTTCAAGCTGTCCTTTTCGCTGTCGCTAGCCATTTTGGTTATTGCGGTGGTGGCGGGCATCTTTTCC
TTCGTTTCCGCATTCGACGA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRVLLVEDDFMIGEAIQGALKDASYAADWVKNGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLTSIRAKDNPVPLLIITA
RDGLNDRLRGLDGGADDYLLKPFEMAELLARMRAVLRRKGGNATSVLSNGVVSLDPATREAAVNNSASVQLSNREFALLQ
ALLVRPGAILSRSDLEDRIYGWGEEVESNAVEFLIHALRRKLGGEVIKNVRGVGWMVSKNV

Sequences:

>Translated_221_residues
MRVLLVEDDFMIGEAIQGALKDASYAADWVKNGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLTSIRAKDNPVPLLIITA
RDGLNDRLRGLDGGADDYLLKPFEMAELLARMRAVLRRKGGNATSVLSNGVVSLDPATREAAVNNSASVQLSNREFALLQ
ALLVRPGAILSRSDLEDRIYGWGEEVESNAVEFLIHALRRKLGGEVIKNVRGVGWMVSKNV
>Mature_221_residues
MRVLLVEDDFMIGEAIQGALKDASYAADWVKNGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLTSIRAKDNPVPLLIITA
RDGLNDRLRGLDGGADDYLLKPFEMAELLARMRAVLRRKGGNATSVLSNGVVSLDPATREAAVNNSASVQLSNREFALLQ
ALLVRPGAILSRSDLEDRIYGWGEEVESNAVEFLIHALRRKLGGEVIKNVRGVGWMVSKNV

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=44.5454545454545, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=42.2727272727273, Blast_Score=170, Evalue=6e-44,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=33.6363636363636, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=36.8181818181818, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=32.5991189427313, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=33.0357142857143, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=32.8947368421053, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=33.4841628959276, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786911, Length=202, Percent_Identity=33.1683168316832, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=32.7510917030568, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=26.8722466960352, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=28.0701754385965, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=29.3617021276596, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=30.8411214953271, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=34.2592592592593, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=32.4561403508772, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24022; Mature: 24022

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLVEDDFMIGEAIQGALKDASYAADWVKNGQTALTTLGCQHYDLVLLDLGLPGKDGL
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCHHH
EVLTSIRAKDNPVPLLIITARDGLNDRLRGLDGGADDYLLKPFEMAELLARMRAVLRRKG
HHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GNATSVLSNGVVSLDPATREAAVNNSASVQLSNREFALLQALLVRPGAILSRSDLEDRIY
CCHHHHHHCCCEEECCCHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHH
GWGEEVESNAVEFLIHALRRKLGGEVIKNVRGVGWMVSKNV
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MRVLLVEDDFMIGEAIQGALKDASYAADWVKNGQTALTTLGCQHYDLVLLDLGLPGKDGL
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCHHH
EVLTSIRAKDNPVPLLIITARDGLNDRLRGLDGGADDYLLKPFEMAELLARMRAVLRRKG
HHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GNATSVLSNGVVSLDPATREAAVNNSASVQLSNREFALLQALLVRPGAILSRSDLEDRIY
CCHHHHHHCCCEEECCCHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHH
GWGEEVESNAVEFLIHALRRKLGGEVIKNVRGVGWMVSKNV
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]