Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907856

Identifier: 71907856

GI number: 71907856

Start: 2413371

End: 2414714

Strand: Reverse

Name: 71907856

Synonym: Daro_2234

Alternate gene names: NA

Gene position: 2414714-2413371 (Counterclockwise)

Preceding gene: 71907857

Following gene: 71907852

Centisome position: 53.65

GC content: 57.44

Gene sequence:

>1344_bases
GTGGGACCTACCGTACTGGACGAACGTGGTGCTTTTGCTGTCGAGAATCCCGAGGTTGCCGAGGTAATGGAGATCGCCTC
GGGGGATCATCTCGATCATGGCGAAGTCATCGGCACCGATTACGAAAAGGCGATCCAATTGCGGATGGCGCTCCGCACCG
ACATCAAGCGAGGCACGCCCCACTATGCCTGCTCATTGTGTGGGGTGCCTGTCTACCTAGTGTCGCGCGCCGAAGAGCGG
CGTTTCTTCTTCCGGCATACGCTGGAAGATGGGCGTTGCTTGGCGCGCACGCGGGGTGAGCTATCGCAGGAGGAGATTGA
TGCAAGGCGTTACAACGGCGTCAAGGAAAGCGCCCGGCACCTGCAGATGAAAGAGTGGGTCGCACAGTGTTTGGCGGCTG
ACCCCCGGTTCACGGACGTGGCCACCGAAAAACGATGGTCTGGCACACTGACGGCAGAGTGGCGAAAGCCTGATGTGCGT
GCAATCTATCGGGGCATTCCAGTGGTTTTCGAGATTCAGTTGTCCACCACGTATGTGAATGTGATTGCCGAGCGCCGCGA
GTTCTACTTGCAGGAAGGTGGTTTGTTGATCTGGATCTTTGCCCACTTCGACGGCGGGGCGCGGCGGTTGACTCAGGACG
ACGTGTTTTTTAATAACAACCGTAATGCCTTTGTAGTGACGCAGGCAACTCGCGATGCTTCCGTGCAGCAGGGACGGTTC
ATGCTGGATTGCATCTGGGCCGAGCCGACATTGATGGGAAATGCAGACCTGCAACGCCGGGTGGTTGGGTTTGACGACTT
GACCTTGGAGCGGGAGAGCCAGCGTGCCTACTACTTCGATTTCGACGGAGCACGGGACGCTCTGCAAGAGCAGGTCCGTG
AACGAGAACGACAACGTCTTGCCGAGGTACGGGAGAAGTTCGAGACTTGGTGGCTCGACTACGAAACGAGCGACACGCCG
GACTATCGTGGCTGGGCTGAGCTACGGCGGGCATTGGCGGCTGAAAGGGTTGAACTTCCTCAATACCCCAACCATGTACC
CCGCACATTGTTGAATGCGCTGTACTCCGCAAAACATGGGCGCGTGATCGGTTGGCGCTTCAAGACCTTTATCGAGGTCG
CACACCGTGTCGAACCGGCGCACAGGCGCTACCTGCATTATTTCCGCCGGGCACTGGCTGCCTACGACCGCGCCGACCAG
TTGCGAGCCGAGGATAAATCGGGGAAGTGGGCGCTCAAGGTGAAGCATTACAAGGCGCAGATGCAGATCAACGATCCTGC
CTACACGCCGGATACCTCAGATATGAAACTGGTTGTTCTTTTATTCCCAGAGATCTTTGTATAG

Upstream 100 bases:

>100_bases
CCCGTCGCCTGCGACCGCGAAGAAACCATGACATGCTGGTTCCTGCCGAGGTACAGGTGCGCCGATCTGCAGCCAAGGCC
TATTGTTGAGAGGGCTAGTC

Downstream 100 bases:

>100_bases
CGCTGATACCTCCGGAAGCCCCAGAGAAAGGGCAAGGAGCGTTGGCCGCGTGGCGCAACGCCCTGCCGTAGATAAGTTAT
GCTCGGTTGGTGGGCAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MGPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTPHYACSLCGVPVYLVSRAEER
RFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARHLQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVR
AIYRGIPVVFEIQLSTTYVNVIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF
MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRLAEVREKFETWWLDYETSDTP
DYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHGRVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQ
LRAEDKSGKWALKVKHYKAQMQINDPAYTPDTSDMKLVVLLFPEIFV

Sequences:

>Translated_447_residues
MGPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTPHYACSLCGVPVYLVSRAEER
RFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARHLQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVR
AIYRGIPVVFEIQLSTTYVNVIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF
MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRLAEVREKFETWWLDYETSDTP
DYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHGRVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQ
LRAEDKSGKWALKVKHYKAQMQINDPAYTPDTSDMKLVVLLFPEIFV
>Mature_446_residues
GPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTPHYACSLCGVPVYLVSRAEERR
FFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARHLQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVRA
IYRGIPVVFEIQLSTTYVNVIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRFM
LDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRLAEVREKFETWWLDYETSDTPD
YRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHGRVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQL
RAEDKSGKWALKVKHYKAQMQINDPAYTPDTSDMKLVVLLFPEIFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52110; Mature: 51978

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTP
CCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCC
HYACSLCGVPVYLVSRAEERRFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARH
CHHHHHCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
LQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVRAIYRGIPVVFEIQLSTTYVN
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEEECHHHHH
VIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHCCCE
MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRL
EEEEEECCCCEECCCCHHHHEECCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH
AEVREKFETWWLDYETSDTPDYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHG
HHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
RVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQLRAEDKSGKWALKVKHYKAQ
CEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEE
MQINDPAYTPDTSDMKLVVLLFPEIFV
EEECCCCCCCCCCCCEEEEEECCHHCC
>Mature Secondary Structure 
GPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTP
CCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCC
HYACSLCGVPVYLVSRAEERRFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARH
CHHHHHCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
LQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVRAIYRGIPVVFEIQLSTTYVN
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEEECHHHHH
VIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHCCCE
MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRL
EEEEEECCCCEECCCCHHHHEECCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH
AEVREKFETWWLDYETSDTPDYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHG
HHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
RVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQLRAEDKSGKWALKVKHYKAQ
CEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEE
MQINDPAYTPDTSDMKLVVLLFPEIFV
EEECCCCCCCCCCCCEEEEEECCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA