| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907857
Identifier: 71907857
GI number: 71907857
Start: 2414726
End: 2415709
Strand: Reverse
Name: 71907857
Synonym: Daro_2235
Alternate gene names: NA
Gene position: 2415709-2414726 (Counterclockwise)
Preceding gene: 71907858
Following gene: 71907856
Centisome position: 53.67
GC content: 59.35
Gene sequence:
>984_bases ATGAATGGCACCATCGAGAACCTGCGGATATTCCTGGAAGAGCGCGACATCGGCGGCTTCCTCGCTGCCTACGAAACGAT GGTGCCGGGTGCCGACGTCCTTAGCAGCCAGCTGACCAAGATTACGCAGCAGATCTTTCCGACGGTGCTCCACGAGAAAC TCACAAGGGGGGCTTTGGTTGCAGGCGACACGGTCCGCCTTTGGCGTCTTGTTCGTTGCGGTAGGCTGCTGGTAGTCGAC AACGACCTGCTTGAAGGCATCAATGCACTGCTTGATGCCGCATGGCGCGAGGTCGAGGGACCGGATGCCCCGCTCCCCAC GAAGTTGTTGACCTATCGCGAGGCGCCGGAGGGATCAGTACAGGGCCGACGTTCTGCAAGGCCAGCAGCAGCTGCCGCGA CCAGCCAGGGTGATGTGGTGCCCATGCGCCGCATCGTGATGGCCAGCGCATTTACTCTCGGGCCAGTGCATTTGAGCGAT CTTATGACCTTCCGTAAGAGCGTTTGCGCCAGCTCCCAGGAACGCGAATTTTTACAGGCGGTGCGGCAATTCTTCCCCAG CCTGCGCGCCTACCCCAACGTGCCGCTACGTAATTTCATGGATGTCGATGGCTTCGTCCTTCGTCTTTCAGATCGACACC GGCGCTATTCGTGGGCGGCACAAGTCGATGTTCTGTTATGCACCGAGGACGAAGATCCCGTGGCTTGTTTCGAGCTGGAC TCAGCTCTGCATGATGACGATGATGTCCGCGAACGCGACCAATTGAAGGACGAATTGTTCGCATTGGCTGCGATTCCGTT GCTCCGCGTTCGGGCTGACGATACGGCGAACGTGCGCGCTGAGGACTTCTACGACCTGCTGGTTGCCGATAGCGAGACCC TGGACAGGTTGCGTCCCCGTCGCCTGCGACCGCGAAGAAACCATGACATGCTGGTTCCTGCCGAGGTACAGGTGCGCCGA TCTGCAGCCAAGGCCTATTGTTGA
Upstream 100 bases:
>100_bases TTCCAACCGAAGGCGTGGTCGAGAAACTGCCCAACATGTGGTCTTACGCCTTCGGACATAGCCTGTTTCTGGATGTCGAC TTCGCGGAAGGTGGTGCGCA
Downstream 100 bases:
>100_bases GAGGGCTAGTCGTGGGACCTACCGTACTGGACGAACGTGGTGCTTTTGCTGTCGAGAATCCCGAGGTTGCCGAGGTAATG GAGATCGCCTCGGGGGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNGTIENLRIFLEERDIGGFLAAYETMVPGADVLSSQLTKITQQIFPTVLHEKLTRGALVAGDTVRLWRLVRCGRLLVVD NDLLEGINALLDAAWREVEGPDAPLPTKLLTYREAPEGSVQGRRSARPAAAAATSQGDVVPMRRIVMASAFTLGPVHLSD LMTFRKSVCASSQEREFLQAVRQFFPSLRAYPNVPLRNFMDVDGFVLRLSDRHRRYSWAAQVDVLLCTEDEDPVACFELD SALHDDDDVRERDQLKDELFALAAIPLLRVRADDTANVRAEDFYDLLVADSETLDRLRPRRLRPRRNHDMLVPAEVQVRR SAAKAYC
Sequences:
>Translated_327_residues MNGTIENLRIFLEERDIGGFLAAYETMVPGADVLSSQLTKITQQIFPTVLHEKLTRGALVAGDTVRLWRLVRCGRLLVVD NDLLEGINALLDAAWREVEGPDAPLPTKLLTYREAPEGSVQGRRSARPAAAAATSQGDVVPMRRIVMASAFTLGPVHLSD LMTFRKSVCASSQEREFLQAVRQFFPSLRAYPNVPLRNFMDVDGFVLRLSDRHRRYSWAAQVDVLLCTEDEDPVACFELD SALHDDDDVRERDQLKDELFALAAIPLLRVRADDTANVRAEDFYDLLVADSETLDRLRPRRLRPRRNHDMLVPAEVQVRR SAAKAYC >Mature_327_residues MNGTIENLRIFLEERDIGGFLAAYETMVPGADVLSSQLTKITQQIFPTVLHEKLTRGALVAGDTVRLWRLVRCGRLLVVD NDLLEGINALLDAAWREVEGPDAPLPTKLLTYREAPEGSVQGRRSARPAAAAATSQGDVVPMRRIVMASAFTLGPVHLSD LMTFRKSVCASSQEREFLQAVRQFFPSLRAYPNVPLRNFMDVDGFVLRLSDRHRRYSWAAQVDVLLCTEDEDPVACFELD SALHDDDDVRERDQLKDELFALAAIPLLRVRADDTANVRAEDFYDLLVADSETLDRLRPRRLRPRRNHDMLVPAEVQVRR SAAKAYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36831; Mature: 36831
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTIENLRIFLEERDIGGFLAAYETMVPGADVLSSQLTKITQQIFPTVLHEKLTRGALV CCCCHHHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE AGDTVRLWRLVRCGRLLVVDNDLLEGINALLDAAWREVEGPDAPLPTKLLTYREAPEGSV CCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC QGRRSARPAAAAATSQGDVVPMRRIVMASAFTLGPVHLSDLMTFRKSVCASSQEREFLQA CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH VRQFFPSLRAYPNVPLRNFMDVDGFVLRLSDRHRRYSWAAQVDVLLCTEDEDPVACFELD HHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCHHHHHHEEEEEEEEECCCCCEEEEEHH SALHDDDDVRERDQLKDELFALAAIPLLRVRADDTANVRAEDFYDLLVADSETLDRLRPR HHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCHHHHHHHCHH RLRPRRNHDMLVPAEVQVRRSAAKAYC HCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNGTIENLRIFLEERDIGGFLAAYETMVPGADVLSSQLTKITQQIFPTVLHEKLTRGALV CCCCHHHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE AGDTVRLWRLVRCGRLLVVDNDLLEGINALLDAAWREVEGPDAPLPTKLLTYREAPEGSV CCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC QGRRSARPAAAAATSQGDVVPMRRIVMASAFTLGPVHLSDLMTFRKSVCASSQEREFLQA CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH VRQFFPSLRAYPNVPLRNFMDVDGFVLRLSDRHRRYSWAAQVDVLLCTEDEDPVACFELD HHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCHHHHHHEEEEEEEEECCCCCEEEEEHH SALHDDDDVRERDQLKDELFALAAIPLLRVRADDTANVRAEDFYDLLVADSETLDRLRPR HHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCHHHHHHHCHH RLRPRRNHDMLVPAEVQVRRSAAKAYC HCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA